Gene list
Applied filters:
COG category: Defense mechanisms
Genomic element: chromosome
Number of genes found: 79
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Pseudomonas fluorescens Pf-5, Pf-5 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | PFL_3970 | beta-lactamase | chromosome | CDS | 4584250 | 1146 | - | 0.656195 |
NA | PFL_4602 | HlyD family secretion protein | chromosome | CDS | 5311207 | 867 | - | 0.645905 |
NA | PFL_0527 | lipid A ABC transporter, ATP-binding/permease protein | chromosome | CDS | 615302 | 1806 | + | 0.609081 |
NA | PFL_2982 | toxin secretion ABC transporter protein, HlyB family | chromosome | CDS | 3348465 | 2160 | + | 0.665741 |
NA | PFL_3846 | conserved hypothetical protein | chromosome | CDS | 4447747 | 849 | + | 0.532391 |
NA | PFL_5415 | membrane protein, putative | chromosome | CDS | 6182986 | 663 | + | 0.630468 |
NA | PFL_4126 | HlyD family secretion protein | chromosome | CDS | 4789731 | 1110 | - | 0.710811 |
NA | PFL_2797 | ABC transporter, ATP-binding protein/permease protein, putative | chromosome | CDS | 3115755 | 1143 | + | 0.618548 |
NA | PFL_2796 | ABC transporter, ATP binding/permease protein | chromosome | CDS | 3113976 | 1770 | + | 0.651977 |
NA | PFL_0088 | N-acetylmuramoyl-L-alanine amidase | chromosome | CDS | 87759 | 780 | + | 0.637179 |
NA | PFL_6029 | multidrug resistance protein NorM, putative | chromosome | CDS | 6848976 | 1407 | + | 0.680881 |
NA | PFL_2558 | AcrB/AcrD/AcrF family protein, putative | chromosome | CDS | 2833428 | 3222 | - | 0.667598 |
NA | PFL_2442 | MATE efflux family protein | chromosome | CDS | 2705670 | 1356 | + | 0.666667 |
NA | PFL_2832 | hypothetical protein | chromosome | CDS | 3156047 | 651 | + | 0.645161 |
NA | PFL_3271 | multidrug efflux RND transporter | chromosome | CDS | 3776576 | 3099 | + | 0.659568 |
NA | PFL_3171 | ABC transporter, ATP-binding protein, putative | chromosome | CDS | 3648668 | 1908 | + | 0.687631 |
NA | PFL_5975 | ABC transporter, permease protein | chromosome | CDS | 6792887 | 1119 | + | 0.651475 |
NA | PFL_5444 | LD-carboxypeptidase family protein | chromosome | CDS | 6214980 | 948 | - | 0.626582 |
NA | PFL_0258 | HlyD family secretion protein | chromosome | CDS | 301221 | 1188 | - | 0.656566 |
NA | PFL_2798 | ABC transporter, permease protein, putative | chromosome | CDS | 3116902 | 1119 | + | 0.624665 |
NA | PFL_1932 | multidrug resistance protein NorM, putative | chromosome | CDS | 2154728 | 1569 | - | 0.660293 |
NA | PFL_5529 | ABC transporter, ATP-binding protein | chromosome | CDS | 6309545 | 711 | + | 0.666667 |
NA | PFL_2964 | type I restriction-modification system, S subunit, putative | chromosome | CDS | 3321535 | 1656 | - | 0.582126 |
NA | PFL_3628 | beta-lactamase, putative | chromosome | CDS | 4188477 | 1620 | - | 0.665432 |
NA | PFL_2980 | RTX toxin transporter VC1448 | chromosome | CDS | 3344936 | 2142 | + | 0.651727 |
NA | PFL_3114 | undecaprenol kinase, putative | chromosome | CDS | 3584957 | 831 | - | 0.625752 |
NA | PFL_3170 | ABC transporter, ATP-binding protein | chromosome | CDS | 3646894 | 1782 | + | 0.695286 |
NA | PFL_0143 | HlyD family secretion protein | chromosome | CDS | 167221 | 1071 | + | 0.690009 |
NA | PFL_2228 | ABC transporter, ATP-binding protein | chromosome | CDS | 2489397 | 669 | + | 0.686099 |
NA | PFL_3495 | ABC transporter, ATP-binding/permease protein | chromosome | CDS | 4025430 | 1755 | - | 0.706553 |
NA | PFL_6100 | lipoprotein, putative | chromosome | CDS | 6931399 | 372 | - | 0.655914 |
NA | PFL_5049 | AcrB/AcrD/AcrF family protein | chromosome | CDS | 5806930 | 3096 | + | 0.656977 |
NA | PFL_1006 | HlyD family secretion protein | chromosome | CDS | 1152379 | 861 | + | 0.642276 |
NA | PFL_4113 | streptomycin 3-kinase | chromosome | CDS | 4774202 | 789 | - | 0.684411 |
NA | PFL_2946 | ABC transporter, ATP-binding protein | chromosome | CDS | 3299110 | 1200 | - | 0.664167 |
NA | PFL_2640 | beta-lactamase, putative | chromosome | CDS | 2920432 | 1812 | - | 0.676049 |
NA | PFL_1772 | ABC transporter, ATP-binding protein | chromosome | CDS | 1974672 | 951 | + | 0.604627 |
NA | PFL_1541 | ABC transporter, ATP-binding/permease protein | chromosome | CDS | 1729868 | 1833 | - | 0.652482 |
NA | PFL_1503 | conserved hypothetical protein | chromosome | CDS | 1687825 | 378 | - | 0.62963 |
NA | PFL_1935 | ABC transporter, ATP-binding/permease protein | chromosome | CDS | 2157868 | 1869 | + | 0.632959 |
NA | PFL_6076 | ABC transporter, permease protein, putative | chromosome | CDS | 6897920 | 1203 | - | 0.701579 |
NA | PFL_0157 | HlyD family secretion protein | chromosome | CDS | 183075 | 891 | + | 0.659933 |
NA | PFL_1331 | multidrug/solvent RND transporter TtgB | chromosome | CDS | 1505607 | 3147 | - | 0.621544 |
NA | PFL_3494 | ABC transporter, permease/ATP-binding protein, putative | chromosome | CDS | 4023667 | 1767 | - | 0.70798 |
NA | PFL_0238 | RND efflux transporter, hydrophobe/amphiphile efflux-1 (HAE1) family | chromosome | CDS | 274718 | 3087 | + | 0.642371 |
NA | PFL_5530 | ABC efflux transporter, permease protein, putative | chromosome | CDS | 6310257 | 1266 | + | 0.659558 |
NA | PFL_1962 | lipoprotein releasing system, ATP-binding protein LolD | chromosome | CDS | 2194774 | 699 | + | 0.659514 |
NA | PFL_5711 | inner membrane protein CreD | chromosome | CDS | 6509189 | 1377 | - | 0.619463 |
NA | PFL_1022 | alginate biosynthesis protein Alg44 | chromosome | CDS | 1170895 | 1170 | - | 0.654701 |
NA | PFL_4323 | ABC transporter, ATP-binding/permease protein | chromosome | CDS | 5027849 | 1821 | - | 0.635914 |
NA | PFL_1342 | beta-lactamase | chromosome | CDS | 1518183 | 1143 | + | 0.684164 |
NA | PFL_2947 | ABC transporter, ATP-binding protein | chromosome | CDS | 3300306 | 705 | - | 0.655319 |
NA | PFL_2775 | beta-lactamase | chromosome | CDS | 3080621 | 882 | - | 0.704082 |
NA | PFL_4712 | membrane protein, putative | chromosome | CDS | 5444784 | 1533 | + | 0.562948 |
NA | PFL_1028 | multidrug efflux RND transporter | chromosome | CDS | 1179770 | 3063 | - | 0.662749 |
NA | PFL_2229 | ABC transporter, permease protein, putative | chromosome | CDS | 2490067 | 2481 | + | 0.696896 |
NA | PFL_0135 | toxin secretion ATP-binding protein | chromosome | CDS | 156831 | 2154 | + | 0.644383 |
NA | PFL_4054 | beta-lactamase | chromosome | CDS | 4666561 | 1173 | + | 0.656437 |
NA | PFL_4134 | ABC transporter, ATP-binding protein, MsbA family | chromosome | CDS | 4799042 | 1719 | - | 0.673647 |
NA | PFL_1158 | RND efflux transporter, hydrophobe/amphiphile efflux-1 (HAE1) family | chromosome | CDS | 1323942 | 3057 | + | 0.64475 |
NA | PFL_6077 | ABC transporter, ATP-binding protein | chromosome | CDS | 6899122 | 717 | - | 0.700139 |
NA | PFL_5974 | ABC transporter, ATP binding/permease protein | chromosome | CDS | 6790161 | 2727 | + | 0.660799 |
ampD | PFL_0853 | N-acetyl-anhydromuramyl-L-alanine amidase AmpD | chromosome | CDS | 985373 | 561 | + | 0.604278 |
ampE | PFL_0854 | inner membrane protein AmpE | chromosome | CDS | 985930 | 837 | + | 0.65233 |
dinF | PFL_0680 | DNA-damage-inducible protein F | chromosome | CDS | 793198 | 1347 | - | 0.697847 |
drrA | PFL_2207 | ABC efflux transporter, ATP-binding protein | chromosome | CDS | 2467571 | 759 | - | 0.704875 |
drrB | PFL_1773 | ABC transporter, permease protein | chromosome | CDS | 1975619 | 780 | + | 0.602564 |
drrB | PFL_2206 | ABC efflux transporter, permease protein | chromosome | CDS | 2466783 | 792 | - | 0.661616 |
emrA | PFL_3917 | multidrug resistance protein | chromosome | CDS | 4521606 | 1203 | - | 0.616791 |
estC | PFL_1281 | carboxylesterase | chromosome | CDS | 1451642 | 1209 | + | 0.650951 |
farA | PFL_2541 | HlyD family secretion protein | chromosome | CDS | 2812273 | 1125 | + | 0.675556 |
farA | PFL_2048 | HlyD family secretion protein | chromosome | CDS | 2276358 | 1104 | - | 0.638587 |
hsdM | PFL_2965 | type I restriction-modification system, M subunit | chromosome | CDS | 3323187 | 1743 | - | 0.56856 |
macB | PFL_4082 | macrolide efflux ABC transporter, ATP-binding/permease protein | chromosome | CDS | 4709850 | 1974 | + | 0.665653 |
macB | PFL_2149 | macrolide efflux ABC transporter, ATP-binding/permease protein | chromosome | CDS | 2403612 | 1959 | + | 0.666156 |
mdtB | PFL_2860 | multidrug RND efflux transporter, permease protein MdtB | chromosome | CDS | 3190059 | 3099 | + | 0.659245 |
mdtC | PFL_2861 | multidrug RND efflux transporter, permease protein MdtC | chromosome | CDS | 3193195 | 3108 | + | 0.646396 |
mexF | PFL_3241 | multidrug efflux RND transporter MexF | chromosome | CDS | 3738424 | 3180 | + | 0.635535 |
mtrD | PFL_3617 | multidrug efflux RND transporter | chromosome | CDS | 4174468 | 3078 | + | 0.655945 |