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2024-05-07 08:17:47

Gene list

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COG category: Defense mechanisms
Organism: Pseudomonas syringae pv. tomato str. DC3000, DC3000

Number of genes found: 65

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pseudomonas syringae pv. tomato str. DC3000, DC3000
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PSPTO0008 type I site-specific deoxyribonuclease, HsdR familychromosome CDS11067 3300 + 0.559697
NA PSPTO2021 ABC transporter, ATP-binding/permease proteinchromosome CDS2209190 1770 + 0.605085
NA PSPTO2592 AcrB/AcrD/AcrF family proteinchromosome CDS2863432 3144 - 0.617684
NA PSPTO1220 fusaric acid resistance protein, putativechromosome CDS1336284 861 + 0.606272
NA PSPTO4352 hydrolase, putativechromosome CDS4914754 1107 - 0.608853
NA PSPTO1654 conserved hypothetical proteinchromosome CDS1818461 1275 + 0.547451
NA PSPTO0681 permease, putativechromosome CDS737352 1266 - 0.606635
NA PSPTO0005 type I restriction-modification system, M subunit, putativechromosome CDS7092 1707 + 0.5372
NA PSPTO2603 ABC transporter, ATP-binding/permease proteinchromosome CDS2890695 1746 - 0.62142
NA PSPTO2834 beta-lactamasechromosome CDS3184331 963 + 0.576324
NA PSPTO1087 type I restriction-modification system, S subunitchromosome CDS1193259 1269 + 0.510638
NA PSPTO4304 AcrB/AcrD/AcrF family proteinchromosome CDS4851676 3135 + 0.592982
NA PSPTO4091 ABC transporter, ATP-binding/permease proteinchromosome CDS4602462 1833 + 0.585379
NA PSPTO3071 ABC transporter, ATP-binding/permease proteinchromosome CDS3453003 1860 + 0.610753
NA PSPTO1653 conserved domain proteinchromosome CDS1816911 1554 + 0.533462
NA PSPTO2755 AcrB/AcrD/AcrF family proteinchromosome CDS3066116 3108 + 0.605856
NA PSPTO3141 undecaprenol kinase, putativechromosome CDS3529416 831 - 0.589651
NA PSPTO4218 conserved hypothetical proteinchromosome CDS4750984 378 - 0.470899
NA PSPTO3420 hypothetical proteinchromosome CDS3856821 600 - 0.566667
NA PSPTO2159 macrolide ABC efflux proteinchromosome CDS2370963 1971 - 0.634703
NA PSPTO5191 AcrB/AcrD/AcrF family proteinchromosome CDS5907261 3102 - 0.599936
NA PSPTO3703 HlyD family secretion proteinchromosome CDS4176175 1164 - 0.626289
NA PSPTO0370 MATE efflux family proteinchromosome CDS404865 1377 + 0.599129
NA PSPTO0951 ampE proteinchromosome CDS1029602 837 + 0.624851
NA PSPTO0338 N-acetylmuramoyl-L-alanine amidase, family 2chromosome CDS367634 780 - 0.598718
NA PSPTO2875 ABC transporter, ATP-binding proteinchromosome CDS3238149 693 + 0.623377
NA PSPTO3855 ABC transporter, ATP-binding proteinchromosome CDS4366330 933 - 0.569132
NA PSPTO3167 hypothetical proteinchromosome CDS3559693 306 - 0.604575
NA PSPTO1736 ABC transporter, ATP-binding/permease proteinchromosome CDS1902001 1827 + 0.625616
NA PSPTO3172 membrane protein, putativechromosome CDS3564236 1362 - 0.613803
NA PSPTO0820 AcrB/AcrD/AcrF family proteinchromosome CDS884192 3111 - 0.615558
NA PSPTO1089 type I restriction-modification enzyme, R subunit, putativechromosome CDS1195573 3123 + 0.574768
NA PSPTO1222 conserved domain proteinchromosome CDS1340118 195 + 0.6
NA PSPTO4671 alkaline D-peptidase, putativechromosome CDS5274267 993 - 0.511581
NA PSPTO4668 membrane protein, putativechromosome CDS5271474 663 + 0.598793
NA PSPTO3913 conserved hypothetical proteinchromosome CDS4427938 375 + 0.608
NA PSPTO0682 ABC transporter, ATP-binding proteinchromosome CDS738619 711 - 0.624473
NA PSPTO2604 ABC transporter, ATP-binding/permease proteinchromosome CDS2892437 1782 - 0.62514
NA PSPTO1517 conserved domain proteinchromosome CDS1673427 228 + 0.609649
NA PSPTO3854 ABC transporter, permease proteinchromosome CDS4365545 789 - 0.585551
NA PSPTO3690 conserved hypothetical proteinchromosome CDS4157261 861 - 0.486643
NA PSPTO0115 multidrug resistance protein NorM, putativechromosome CDS136326 1383 - 0.634129
NA PSPTO1308 AcrB/AcrD/AcrF family proteinchromosome CDS1437432 3105 - 0.628019
NA PSPTO1638 ABC transporter, ATP-binding proteinchromosome CDS1794648 669 - 0.615845
NA PSPTO0006 type I restriction-modification system, S subunit, EcoA familychromosome CDS8861 1308 + 0.511468
NA PSPTO2428 multidrug resistance protein NorM, putativechromosome CDS2680315 1341 + 0.492916
NA PSPTO3748 multidrug resistance proteinchromosome CDS4235726 1209 - 0.614558
NA PSPTO2490 ABC transporter, ATP-binding/permease proteinchromosome CDS2752511 1812 + 0.619757
NA PSPTO3620 HlyD family secretion proteinchromosome CDS4082701 885 + 0.638418
NA PSPTO3302 AcrB/AcrD/AcrF family proteinchromosome CDS3734097 3036 + 0.614295
NA PSPTO1637 ABC transporter, permease protein, putativechromosome CDS1792171 2478 - 0.611784
NA PSPTO2030 muramoyltetrapeptide carboxypeptidase, putativechromosome CDS2217088 1002 + 0.638723
NA PSPTO2876 ABC transporter, permease protein, putativechromosome CDS3238825 1224 + 0.637255
algX PSPTO1237 alginate biosynthesis protein AlgXchromosome CDS1357425 1440 - 0.591667
ampC PSPTO3594 beta-lactamasechromosome CDS4053747 1152 + 0.598958
ampD PSPTO0950 N-acetyl-anhydromuramyl-L-alanine amidase AmpDchromosome CDS1029038 549 + 0.579235
dinF PSPTO4844 DNA-damage-inducible protein Fchromosome CDS5484381 1341 - 0.648024
estB PSPTO2956 esterasechromosome CDS3322937 1155 - 0.641558
estC PSPTO4119 carboxylesterasechromosome CDS4642495 1149 - 0.635335
hsdM PSPTO1086 type I restriction-modification system, M subunitchromosome CDS1191539 1731 + 0.586366
lolD PSPTO2110 lipoprotein releasing system, ATP-binding protein LolDchromosome CDS2285367 684 + 0.621345
macB PSPTO2832 macrolide ABC efflux protein MacBchromosome CDS3181322 2007 + 0.614848
mexF PSPTO3100 multidrug efflux RND transporter MexFchromosome CDS3484393 3192 + 0.602757
msbA PSPTO4984 lipid A ABC transporter, ATP-binding/permease proteinchromosome CDS5656790 1875 - 0.584
traK-1 PSPTO_B0056 traK proteinpDC3000B CDS42592 288 + 0.576389