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# Coxiella burnetii RSA 493, RSA 493

>CBU_0833 ABC transporter, ATP-binding/permease protein
MFDYIKVILSFLNKNDIKKLSLLILLMVLAACIELVGVGAIFPYIKILGD
QQIIQHNSILNYIFNFLHFKRDNSFLVFIGFVIFVMLSLKAIITCINNYY
QSKFAQNLNIRMSGFCIRSYLFMPYQKAMEFNTSTLSKYILTDVVYTVNV
ITFILSIVTDSIVVFSLACLILWVDFKIVLLSVVSLTALLLLTMKGTKTK
IKNISNENEYYTRKLYKIASDAFQGLKDIKINNVEAYFIEKFVFWRRKNA
ENMVIYNVVANVPSVLMNLIGFGILLIILLYLLFSHGNLISILPIVGIIA
ISIQRMLPAIARISLALGNVRQYHANVLVVRKALDELGEYQNILLRKRRS
QQDVEFKRELNLKDITYQYPKAKAETLKNISLTIPKNTSVGIVGASGAGK
STLVDVILGLLPVKSGSIFCDDIDITNSHIDLSHLVGYVPQHTHLLEGTL
LDNIALGVSEKAIDHEAVRRGVNIAQLQNLINDLPEGLYTQIGEKGTKLS
GGQRQRVGIARALYHNPDIIIMDEATNALDSITENEFNEALKSLMGKKTL
IIIAHRHSSILFCDKLVVLHEGKIVSEGNHNELVKNSEIYRTLYGLERVR
N
>CBU_0934 ABC transporter, ATP-binding protein
MKALIIEDLKKTYKNHLQALKGISFSVEEGDFFALLGPNGAGKSTTIGII
TSLVNKTSGKVFVYGHDIDHEFAAAKACIGIVPQEFNFNGFQTVLDIVLQ
QAGYYGISRQKTMPRAEKYLKQLGLWEKRNDMARSLSGGLKRRLMIVRAL
IHEPQMLILDEPTAGVDIEIRRSMWQFLQELNQGGRTIILTTHYLEEAEY
LCRNIAIIDHGKIIENTTMSNILTKLDAERFILYLSRPLEEIPTVDGYQF
WIQDTHTLEVEVPKARNLTVLLGQLQQRGIEVTRMRNKANRLEELFIKLT
TAGK
>CBU_2037 ABC transporter, permease protein
MEAQSSHQAPLSPKGSLGLFRGYISILRELFTILSEWCSPTTMWMGLVLP
GIFINLLSLAFPLILLQVYDRVIPQQSIYTLTFLIVGGIIVTGIAMVLSI
LRSVSINWTSARFEYFTHLRVFQRLLACKLDDFQKEGSGYYLKRIDDILN
IKDYYLNQVLTNFLDLPFVILFIALMAYISTYIARIPVLMIFFLFFSSTR
SLNELGKHVEIKHTEDGRRWSFLANIFSGSKTLKFMVSEPLMLRRYERLL
NKSLEENKSIHHILSSVQGTSNLAQYSTLGLVILIGGAMLINGNLSMGAL
AASVLLAGRAIQPVRRMIALWQQYQSIPVAKK
>CBU_0812 MATE efflux family protein
MNTSTPQIIKNVVNLALPMAGSRLIQMLSGFIGMLMLARLGHSILAASML
MTSTQVTIIVIFISLLFSMSVVVGQAYGAKKYDEVGVILQQGCILALILS
IPLIILFLVADRILLALGQLPELVIYVKHYFRALIWGTPGFVLLAALQQA
LYGMSRQRIVILANLFCLGVFVLSAYVLVFGHLGISAQGVTGVPYAFAIQ
AYLNIIILLFCFYYQKQFKPMGIFKWRSHQRWRYLKQLFQIGWPMCMQFG
GELMAFFVISIMIGWLGKNELAAAQVTQQCLFLFVVPMFAVAEATGIMVS
HAVGGKQYQSVKRIGEISLIIAMILVSVAALIFLAFPEFLASLYIDVKAP
QYTHMIHLIKILFILVAFSITFDTLRNVASGALRGFYDTRFAMWAGLGAM
WIISVPGGYLLGVVFHYGVIGFRIASAFAFLIGALLVLWRWRERVKEYSQ
LP
>CBU_0856 ABC transporter, ATP-binding/permease protein
MKTLTSQGIRTYGRLLQATKQYWPIFLIGVVGMIAVSLSDAGFTWLIKPI
INRGFIARDLVFIRWLPFIIVLVFLFRGAANFLSTYFINRVARNIVMDFR
RAIFSHLLRLPAEFYDRHSSGHLLSTVIYNVEQVAQASSDALIITLQASS
LVVGLLVVMFLVSWKLTLFFLVITPLIAWVMRVCSARLRHLSTSVQKSVG
EVTHIASEAIEAYKIVRLYGGQKYENEKFRHATKLNQQRELKVVVTNSVG
TSLVQLLIAIPIAIVLFFATQPSFHVTAGSFASIVSAMIMMLRPVRRLTM
VNSYIQKGIAAAESIFKLLDEDVEKDRGERHLVRARGAIEYQGVSFAYDN
SKKTILSEISFSIEPGQMVAIVGRSGAGKSTLINLLPRFYDASTGVIKID
DINIKEFRLQELRNQFGLVSQHTTLFNDTILNNIAYGQAGSIDKRKIIEA
ARAAHAMEFIEQLPEGLDTVIGENGVRLSGGQRQRIAIARALFKNAPIHI
LDEATSSLDTHSERHIQAALDNLMDQCTTLVIAHRLSTIERADWIMVLEE
GRLIEKGTHQQLLTLNGAYAELYRMQFAEKPAAMTALDE
>CBU_2038 ABC transporter, ATP-binding protein
METKGKLSDAAITKGDIVFDHVSFHYEKEKPLLEDINLHVSPGEIIGITG
TNYSGKTTLLEFILGFHTPTKGEIRIDGKNIENYDKMILREKIAYLPARG
QIFRGTLLENITMFRPERAKQALELSDHFGLSELIWPLPNGFDTTVGGGC
SEILSRGVVQVVSTIRALISKPKILLSDEANALLDLKTDQLFLKILQSLK
KDCTMIIISHRPSTLALADRLYELDSGRLILKTHSNGRSL
>CBU_0807 beta-lactamase
MQPINVIKHNLPGAILSVCKAGNRIHHYCSGYADIKTKESLSDKPIFPIG
KITRFFTAAIILKRLEEGVVDLDAPLAVLSHQHRLDGGRLKLLVDLYPYL
KPLTLRELLNHTSGLPSYDETMAYQKMFMAKPNKVWQAEGYLDLITGSSV
RYRLGYELPVRGIFSDSATNYIIAGFVLEAASGRKSSQQMRELFDLMDLK
STYYSSYGVLDKKLLPRLAHGYLPISHPYAVAFNHLPVQTYNENRELQAY
DVTRAYNFNGLGGAAGLSTTTDLIRCLRALLEGRVLKSSFKQMFEVVPVD
PKAGAREDQDYYGLGIYKTRLQRWGDIIWSAGNSFGYGVLVAHVMERNIT
FALAVNVSRKLIHFHEPTLVAEVFQEILK
>CBU_1808 ABC transporter, permease protein
MFHRQENMSFIRYIKAALRNLISSKLRSFLAILGILVGTASVVALITSSQ
LATEHALDQFKELGTNLLAMDVQPRPGQQQTDVSQQITLAKIPQIKHASQ
QIALVAPYTSLFNTLYFEGKQTEGQVLGATAELAEIVKIQIDKGRFVSYL
DRNSFFCVIGSDVGKDFLAKGIANPIGHQISIGKFVFTIIGVAKHWQPNW
FLYADINKGAIIPLATSFFLSKDAQINNLLFRLVPDPDIAEVQNALADKM
SQLYPQLKTTSRSPDQIIGIMKKQQNTFTWLLGSIGGIALLVGGIGVMNI
MYVSVIERRREIGIRMAVGARRANIRRMFLVEAIILTLFGGLLGILVGVA
IASILALATGWGFRILLFPPILGFVISVLVGVISGFYPAYRASNLDPIET
LRGE
>CBU_0404 streptomycin-6-phosphotransferase, putative
MNMKTLETNAINVWGENGKSWLNQLPGIIKQLSDYWSLRGIQPIDNMSYN
YVAKAVQNDQSPVVLKISCDKQLIENESRALKSFNGQGSVRMLDMHHELN
ALLLEQAIPGNLLKSDYPGNIKNTIKVYAGVVNALASCPEPSDEHTHVSK
WCEALDRINDDQIRPHFIRKAKVLRDFLLSSATTEYLCHADLHLENIINH
GNRWLSIDPKGIIGEMAFEAAAFDFIDQNEWSEPDTIQDKMITRVSLLAN
VLAIDQERLFAWVFLRAIISAQWFIEDNGDPAEMLNLGSVIDPLLTRPSV
SEAAHKPEIKVDELTFKNAYPMI
>CBU_0798 multidrug resistance protein
MIKKFVKVILPLFIIAILSIGGYFYWQHQNRYPSTDDAYIQADVINVASR
VSGTVSEIDVRNEEHVQKGQLLFTIDPAPFTIELNKAQAQRDATRQKIQA
ADMAVKSARATVVERKAELTHTRLETKRILTLMKKQFVSRSDGDLAIKNL
HVAEAALNAAQNQLEEMIEKRGELGDKNAQLRLAQAAVEKAKLDLQYTRV
FAPTSGYIANFNLRHGDVVSAYQPLFALIEDQTWWAQANFKETQLARIHT
GEQATIKLDMYPHQIFIGKVVDVNKDSGSSFSLLPPENASGNWVKVTQRF
PVKVIITQRKSGYPLRLGASSTVTIDTTSPK
>CBU_1632 IcmO protein
MAYQPRGLEEKHERFHSHVLRDTRTLSVRMADFLKNPRGIATFLLLLAII
TFFISYFSDVILLLGIGSFIYTYTRKYKLPFRLPQHSHMKDYNDPLPGTR
NKPRQAQGIYYFGNEGRTKEELWFSNEDMRTHVLIFGSTGSGKTEAMVSI
AYNALLQASGFIYVDGKGDNSLFAKVFSIVRSMGREDDLLLINFMTGAKD
IIGPQEKRLSNTLNPFANGSSSMLSQLIVSMMDKAAGTPDGDMWKGRAIA
FTEALMKILVAMRDAGHILLDANTIRNYFHLPKLEAIVVDKLFLREGEEP
INLENVPPTVIEPIVNYVLTLPGYNKEKKGKQVSQVLEQHGFITMQLVRV
FTSLADTYGHIMRTNLAEVDLRDVVLNRRILCVLLPALEKSPDELSNLGK
VIVSTLKAMMASGLGEHVEGEYSDLVDAKPTNSKTPFLCVLDEYGYYAVE
GFAVVPAQARSLGFSIIFAGQDLPAFQKASKEEAASIGANTNIKVCMKLE
DPTETWDFFMKSAGESYVTHVESFQVDQGSVLGTYQDGRGARVEKRARID
LLDLKEQRQGEAHFFFKSKIVRGKFFYADPKRTKHLRLNHFLKVEGPSDS
EAKKLIKSFEHFEKLATKDTIFSDVEASNEEVEKVSQVFSEETHLAPFDR
SIIALKKFFTQTGDIPTSFLQELSASQKEDVDYLSLFTPLRLSDHIKEVV
ISSDLDNFKKPILDRAYLRDQIEYIQRLCGKSSQQAMNIAVELISDMEKG
TRYPPKVDFTLKETDVAEGIRDMIQAISLKKKEAAEKADNKS
>CBU_0753 transporter, AcrB/AcrD/AcrF family
MNISEICIKRPVLALVLSLVLVVVGIMGFNDLNTRFFPKFEQNVINISTA
YPSASAKLVESSITTPLEEGISGVQGIDTIISQSFQGESDIKLTLDYGVN
VYEVANQIRDKVEQARVQLPTNINAPVVQVGWGNMELMDVGFTAPNENPK
AIRDYLERNVIDQIEQIPGIADVEVAGANQYAMRIWLDPQKMAARGLSVN
DVQMAIQNSNVELPAGEIKGSSINYPITAETKLNTADQFNNIIVKNDNGQ
VIRIKDIGQAQLDDDSADQSIVTLDGQPGVLLSINNATDANPLDAAKNVN
HFLNQIRPHLPNGMKIVPSFDISAYMHGSIHEVYISIGIAILCVILVIFL
FLGRLRTVAIPIATIPVCLIASFGAMYLLGFSINVITLLALVLSIGLVVD
DAIVMLENIYRHIENGEKPLIAAIKGSKEITFPVIAMTITLAAVYAPIGL
MQNQAANIFRSFAFTLAGAVLISGFVALSLSPMMCSRFLKAQGGEPKGYS
RIIETIYERMAQGYQKILAAILNKRILVVFAAVLIAVGGFFLAKNIPMAF
VPQEDMGFVIAAVSTSSGSSINTINRGLEQVASIFKQAPAVASVVTVADT
NAKAFDSVFAMLKPFKDRKQSASQVADVINQKIKQIPGLNAAAFAPSFGG
SMQHQLEFYLMGDTYSDLYAVSQKLINQLGNYPGLRVIQSNMRFDSQQYN
MTVNRDIAGQLQANIKDIDNTMAALYGGSKISTFDANGKTYNVYLQAQEN
DLHSLASINKFYVNNAQNKLIPLSNLISIKPILSQVVLPHYNHLRAAQMS
AQLAPGYNLGTVVNYLQTELPQLLPANVKYAFTGQAHDLLTSNNSMGLIF
LLAMVFIYLVLAAQFESFIDPFIILLAVPLSIVGAMASLKLIGGTLNIYT
DIGLVTLIGLVSKHGILITQFANRLQKEGLAMREALLKAASIRLRPILMT
TAAMVFGALPLLFSSGGSAQSRHQIGIVIIGGLIFGTFFSLVVVPVAYSY
AYKFKLFLKRFKTTDEMSLSGK
>CBU_1000 lipoprotein ABC transporter, ATP-binding protein LolD
MNNAPVIHCEKLSKTYVEGKLRVPVLHEVEFSVAPGERIAIVGASGAGKS
TFLQLLGGLDKPSNGKIWVNGNDINQLSEREKGLLRNQHLGFVYQFHHLL
PEFNALENVCIPLLVRGGIKPKHARQKASAYLEKVGLSHRQKHRVGELSG
GEKQRVALARALVTEPCCVLADEPTGNLDQKTAEQVADLTLQLNRSLNIS
FVIVTHNREFADKMDRVLLLDKGQLQSESERNH
>CBU_0776 ABC transporter, ATP-binding protein
MNVIDAKHLNKKYGKFAALKEINFAIKRGQIVGLIGPNGAGKTTLLKSIL
GLTNYSGELNVLGLNPRSDRVKLMHHLCFIADVAILPRWIKVENLIEFVE
GVHPNFNREKALGFLNKTNIKMHQKVKELSKGMIVQLHLALVMAIDVEIL
VLDEPTLGLDILYRKNFFHTILNDYYNEKRTIIIATHQVEEIESILTNLI
MIDRGELLLESSMEEIAERFTEVRAMPDQAQFLQPLKPIFESKEIGRVRF
IFENVDKNELEKYGEITVPSISYIFVAKIKENL
>CBU_0777 ABC transporter, permease protein, putative
MRTLLTLINREFWEQRGTFFNVPLILAGIFVLVAIAFFILSFGQMVDIGS
LQSELANQRVADLIPGAFTAIASPFVLVLWLIVFYYFLGALYDDRKDGSV
LFWQSMPTSQTQTIVSKLIAGLILAPFCTWVVVMVTQLIILGIASLFLII
HPILPWTALWSAPVILSAWLHIFAVILFQALWLLPLFAWCLLCSAFAKKA
PALRAVVPIIVLIILEILFFSQHYFTDFVISRFQYAAEAWRTLSLYGGQL
ISHQGRLSLVNQIKMPFPLDNIKLITMGIGILLSLICYILAGWFRSRCYD
FER
>CBU_0804 transporter, AcrB/AcrD/AcrF family
MKLSEICIRQPVLAIVLSLILVVLGVVAFQRLELRFFPKLELPILTVATT
YDGASAQLMESQVTTQIENALSGVDHIASISSTSYPGSSYVTVLFQLGGN
FEEEASAVRDKVFAIRDQLPPNANPPTITVGTKGNPVLGIGFIDPQKSSA
DIRDYVERAVQPALRQLSGVGEVDILGASDYAMRIWLNASKMVAHQVTVT
DVKNALTANNIYFPAGSIQEPKRNYSIVSHTQLKDATAFGNIIIKNNDGG
TVRLNDIGHAELGYRSLYEAPMRINGQNGIELLIEPLQEANPVTVAHEVK
QALATIQKNLPPGMQASVNYDASTFLKSSIEETFYAMGEAVLLVIFVVFL
FLGSARAASIPIITIPVSLIAVFAFIKLFGFTINTMSLLGIVLAIGLVVD
DAIVMLENIHRHIEEGMTPFQAAIKGSREISFAIIAMALTLVAVYAPVGF
VQGFTAELFKEFAFTLAAAVVISAFIALTLSPMMCSRILLPRTKDSRLTI
IIDRAFSQLTGFYQRFLKFALNKRRLFIAGLLAIAGVGYVLFISLPSELI
PKEDIGLIQVSVTSPSGASLNYTNQYAEQVEKIIQQNPAVASVMSQVSTT
SVNIRVTLKPWGERRETTAQVIANLNPKLAAIPGIDATAYLPDVVNYGLQ
GNDIDLNFMTAGDYTDLLDPINKMMKLLKHYPGVTDLHTNLKYDTQQYAI
TIKRDLAAVLGVNIQDIADTVSAMMSGNHWTDVQAGNKSYEVIVQMDKQD
LTDFNALKKLYVHSNNKTDANKGNSIPVSSLIDLTPTVGQGSFTHFNRFR
SGTISARLAPGYSESQVIDYIKAHVPFVMTSDVHYAFSGKAAQFLQSSKS
MIGIILMSLIFIYLVLSAQFGSFLDPFVILLAVPLCIVGGLLSLKLTGGT
LSIYSQIGLVTLIGMISKHGILITQFINDLRKQGMAMQEAILRGAMIRLR
PVLMTTLAMVFGALPLALASGPGSIGRHQIGWVIVGGLLFGTFFSLIVVP
IAYSYLGRFKKR
>CBU_1809 ABC transporter, ATP-binding protein
MIEFKNITKVYQFGSNSYKALKGVSFLIEKGELVGIIGASGSGKTTTMNI
LGLLDHPTSGEYLLRNKNVAYLSPNQRADLRNRHIGFIFQLFFLLPRLNA
LQNVGLPLTYRNLSGKRINKRALTMLERVGMAKFHHHKPSELSGGQQQRV
AIARALVGKPDIILADEPTGALDSKTSQEVLDLLIQLNREEGCTVVLITH
DEQIAAQCPRVIKMHDGLIVP
>CBU_0933 ABC transporter, permease protein
MAFKEERIAYQTIVVIELKRILRIWSQTILPPAITSILYFFIFGQIIGER
VGTINGYKYIQFIAPGLIMMNIITSSYSSAVSAFFGAKFQHSIEELLVSP
VSNITILLGYMSSGVLRGILVGIIVTLIALFFTHLHVHSIISILIAALLS
ACIFALAGLINAIYAKNFEGISIIPTFVLTPLTYLGGVFYPITLLPKFWQ
YVSYVNPVSYIIDNFRYGFLGIKDSYLTLSYFLMLSFIIILFSISYYLME
KGVGLRE
>CBU_1845 hypothetical protein
MWLADHVTIDTIFGTWIAEKWKMPIRPLFVGLYASNAIDIDHAFDLGQDT
GFVNSLTIHTFHIYGGFILASFILYALIFNFSKTRYWAIAIALGLAIHLW
CDAIAFWVHYNIIILGGMSILLVLFLPLILKCFSSPIPIKNLWFLVGVYW
IADTAQRTIFYFDFKNAYKTIISAWIVPIILLGLFIIFANFYIKPWEKPQ
HSK
>CBU_1212 hypothetical protein
MPKTRKASSLVTVLKGTDIIYDPKTHSPDAEVEAIIKNALRQRRQRVTVL
AGTDEIFDPEKHSPDAKVETITKGALWNRRQRVMVLAGTDEIYDPETHS
>CBU_1093 transporter, AcrB/AcrD/AcrF family
MASSKFTDKFIIRPVLAIVVSLFIFILGLRAITEMEVRQYPKMNNTLITI
STAYPGAPASLIEGFITTRLEKSIAGAEGIDYMTSTSTQGVSTINVFIKL
NFDPNVAFTDIMSKVAQVQNDLPRESQLPVIQKLTGTQTALMYISFSSDQ
MSSEQISDYLNRVVQPKIETVFGVSQAEILGGQTFAMRVWLNTKRMAALN
VTPTDVTQALINNNFQSAAGQTKGDFITLYIKAKTDIGDKQAFENLVIKE
VNGTLIRIRDIGRVELGAEDYDSSVYMNGKSAIFVAVNTTPTANPLSVIA
NVKKILPDLEKEYPPSLHSKVVYDATEYIQASIYEVIRTIFEATLIVIVV
IFLFLGSIRTVVIPVITIPLSLIGVCFLMWFLGYSLNLLTLLSMVLAIGL
VVDDAIVVVENVYRHIEEGMDGFHAAIRGAREIAFPIISMTLTLAAVYAP
IGFMTGLTGALFTEFAFTLAGAVIVSGIIALTLSPMMCSKFLNQNIGKQR
YVQFIDRSFERLKQFYSRRLHGVLNHRFLMVLLAVAVLASCFIFYMNTTS
ELAPEEDQGALFVQAQAPQYANIDYVEAYSKQYEKYFKKLPSMANYFMIN
GFGTVNTVLAAMIMKPWDQRQQSQKQAQAILQPELNTVAGLQTVVFPLAS
LPGGGTGLPVQFVITSIAPFNKIYLATEQIVEEAKRSGLFIFVDSELKYN
NPQLNVIIDRNKAGDLGVTMQSLSQILAYSLGGNYINRFAMMGQSYKVIP
QLSRLFRLNPSNLEQIYVNTAGGQLIPLSTLVKMNITTQPNLLSHFQQLN
SAQIDAVLAPGHTMGEALTYLEQTANKVLARDMSYDFGGQMRQFVQEGQA
LVVTFFLAIIIIYLVLAAQFESFRDPFVILISVPMSICGALIFLNLGLAT
INIYTQIGLVTLIGLISKHGILMVEFANKLQEEEGLSVREAIEKSAAIRL
RPILMTTAAMVLGVVPLILATGAGAVSRFDIGLVIATGMLIGTMFTLFVV
PTMYLLIAKKHQPLRKVDE
>CBU_1623 IcmJ protein
MMALRNIQLSASDSNWRLFMVRKADTAFLAFQAKVHERDNYTCQYCGFRA
KRYMEIVNLDGNYRNNRLTNLATACGFCSQCFFLDAVGKGESGGGTLIYL
PEMTQGELNALCHVLFTSIATESSSATEARNIYRSFKLRSQIIEQQLGEG
LSHPALLGQLLVDTKTEKMSLLKDALETKLRLLPDLARFSVQVEAWARDG
LEELGSVYNTRD
>CBU_1950 hypothetical protein
MSRFSMKNILWGVYGGLMGGIVFGILMAAMGMMPMIGQMVGVAHPFVGFI
VHLIISIITGALFAILFMNAVKSYGSGIFWGFVYGVIWWFLGPLTLMPLF
LGMGLGTSWTAAALSAQIPSLIGHIIFGVLLGWVYAALKLKKSKKLVG
>CBU_0379 ampD, N-acetylmuramoyl-L-alanine amidase
MTYEINLNYPAKNFDKRIRFLVLHYTAKNFEDSLEILTQEAFGVSGHYLI
PESSIDGKKQIFQLVPEKHRAWHAGVSAWQGRIHLNDTSIGIEIVNLGYQ
EEGEKRRWFPFLDYQIELIIELAKDIIERYQLHPTCVVGHSDISPERKAD
PGPLFPWKKLYEQGIGAWYEDECKKEMERRLSNETTDIRWLQRHLKTYGY
SIEETGELDKKTQQVVCAFQMHFRPTDYSGIPDKETYAILYALVKKYFPE
KVSSPLS