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2024-05-04 00:56:48

Gene list

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COG category: Defense mechanisms
Organism: Pseudoalteromonas haloplanktis TAC125, TAC125

Number of genes found: 46

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pseudoalteromonas haloplanktis TAC125, TAC125
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PSHAb0269 Undecaprenyl-diphosphatase (Undecaprenyl pyrophosphate phosphatase) (Bacitracin resistance protein)chromosome II CDS313990 771 - 0.363165
NA PSHAa2861 conserved protein of unknown function ; hypothetical transmembrane proteinchromosome I CDS3035248 270 + 0.392593
NA PSHAa2296 putative ABC-type transport system, permease componentchromosome I CDS2441166 768 - 0.346354
NA PSHAa1698 putative ABC transporter, ATP-binding/permease proteinchromosome I CDS1774736 1848 + 0.442641
NA PSHAb0036 putative efflux pump or secretion proteinchromosome II CDS40812 1068 + 0.429775
NA PSHAa0451 putative ABC transporterchromosome I CDS470477 687 - 0.427948
NA PSHAa2827 putative ABC transporter, ATP-binding proteinchromosome I CDS3000287 708 + 0.436441
NA PSHAa1168 putative Chloramphenicol acetyltransferasechromosome I CDS1214624 660 + 0.393939
NA PSHAa0450 conserved protein of unknown function ; putative transmembrane proteinchromosome I CDS469248 1233 - 0.42498
NA PSHAa2154 putative efflux pumpchromosome I CDS2280383 1419 - 0.423538
NA PSHAa1078 putative secretion proteinchromosome I CDS1113178 861 + 0.412311
NA PSHAb0438 putative metabolite exporter, AcrB/D/F familychromosome II CDS498294 3081 - 0.406686
NA PSHAa2841 ABC-type multidrug transport system, ATPase and permease componentchromosome I CDS3011218 1776 + 0.439752
NA PSHAb0371 similar to AcrAB-TolC efflux pumpchromosome II CDS432741 3153 + 0.439264
NA PSHAa1232 conserved protein of unknown functionchromosome I CDS1282651 1059 + 0.417375
NA PSHAa1239 putative transport proteinchromosome I CDS1289261 3150 - 0.426032
NA PSHAa0522 conserved protein of unknown function; putative peptidase with beta-lactamase domain (partial match)chromosome I CDS537026 1662 + 0.406739
NA PSHAa1823 conserved protein of unknown functionchromosome I CDS1913693 444 + 0.40991
NA PSHAb0189 conserved protein of unknown functionchromosome II CDS227606 525 + 0.375238
NA PSHAa0389 putative ampicillin resistance proteinchromosome I CDS402058 852 + 0.407277
NA PSHAa2833 putative cation efflux system (AcrB/AcrD/AcrF family)chromosome I CDS3004814 3285 - 0.424962
NA PSHAa1109 putative multi antimicrobial extrusion protein MatE/Na+-driven multidrug efflux pumpchromosome I CDS1155088 1377 + 0.387073
NA PSHAa2828 putative ABC transporter, permease proteinchromosome I CDS3000987 1239 + 0.43745
NA PSHAa2273 putative acrB/acrD/acrF acriflavin resistance family proteinchromosome I CDS2416491 3099 + 0.43272
NA PSHAa2862 DNA-damage-inducible protein F (putative NA+ driven efflux pump)chromosome I CDS3035532 1272 - 0.398585
NA PSHAa2300 putative Undecaprenol kinase (Bacitracin resistance protein)chromosome I CDS2445069 801 - 0.385768
NA PSHAa2297 putative ATP-binding component of ABC transport systemchromosome I CDS2441934 930 - 0.393548
NA PSHAa2957 putative multidrug resistance protein, AcrB/AcrD/AcrF familychromosome I CDS3136638 3126 - 0.416187
NA PSHAa0560 putative multidrug resistance protein(AcrB/AcrD/AcrF family)chromosome I CDS578259 3084 + 0.419909
NA PSHAa1316 putative orphan proteinchromosome I CDS1369914 789 + 0.353612
NA PSHAa1923 ABC transporter, ATP-binding proteinchromosome I CDS2033522 909 - 0.424642
NA PSHAb0292 putative HNH endonucleasechromosome II CDS342596 1263 + 0.458432
NA PSHAb0486 putative metabolite exporter, AcrB/D/F familychromosome II CDS548667 3066 - 0.393999
acrB PSHAb0324 putative multidrug efflux pump (RND family)chromosome II CDS374847 3132 + 0.421456
ampC PSHAa0865 putative beta-lactamase precursorchromosome I CDS892957 1146 + 0.390052
ampD PSHAa0388 N-acetyl-anhydromuramyl-L-alanine amidasechromosome I CDS401490 555 + 0.430631
ampH PSHAa0335 putative beta-lactamase, penicillin-binding proteinchromosome I CDS346985 1542 + 0.425422
hsdM PSHAa2094 putative type I restriction-modification system, M subunit; N-6 Adenine-specific DNA methylasechromosome I CDS2217469 2055 - 0.417518
hsdR PSHAa2091 putative type I restriction-modification system endonuclease; DEAD/DEAH box helicase motifchromosome I CDS2212429 3225 - 0.408992
hsdS PSHAa2093 putative type I restriction-modification system, S subunitchromosome I CDS2216141 1329 - 0.367193
lolD PSHAa1389 transport protein of inner membrane lipoproteins (ABC superfamily, ATP-binding)chromosome I CDS1454776 699 + 0.400572
mdtK PSHAa1735 multidrug transport protein (MATE family)chromosome I CDS1815486 1356 + 0.393805
msbA PSHAa1661 lipid transport protein, flippase (ABC superfamily, membrane (N-terminal), atp_bind (C-terminal)) In E.coli MsbA plays a role in lipid A and possiblychromosome I CDS1728317 1746 - 0.385452
sapC PSHAa2053 peptide transport protein (ABC superfamily, membrane)chromosome I CDS2170171 894 + 0.430649
sapD PSHAa2054 peptide transport protein (ABC superfamily, atp_bind)chromosome I CDS2171065 993 + 0.423968
sapF PSHAa2055 peptide transport protein (ABC superfamily, atp_bind)chromosome I CDS2172057 762 + 0.405512