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2024-05-04 13:22:00

Gene list

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COG category: Defense mechanisms
Organism: Pseudomonas putida KT2440, KT2440

Number of genes found: 63

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pseudomonas putida KT2440, KT2440
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PP3735 ABC transporter, ATP-binding proteinchromosome CDS4262758 666 - 0.671171
NA PP2269 N-acetylmuramoyl-L-alanine amidase, putativechromosome CDS2591082 450 + 0.584444
NA PP2668 ABC efflux transporter, ATP-binding proteinchromosome CDS3055618 741 - 0.672065
NA PP2065 multidrug efflux RND transporterchromosome CDS2347791 3084 + 0.647211
NA PP1266 fusaric acid resistance protein, putativechromosome CDS1448279 861 + 0.609756
NA PP3694 hypothetical proteinchromosome CDS4211652 960 - 0.516667
NA PP2862 bacitracin resistance protein BacA/undecaprenol kinase, putativechromosome CDS3264841 834 + 0.598321
NA PP0790 inner membrane protein AmpEchromosome CDS906557 831 + 0.635379
NA PP3883 phage holin, putativechromosome CDS4403714 321 - 0.626168
NA PP4799 muramoyltetrapeptide carboxypeptidase, putativechromosome CDS5462408 939 - 0.658147
NA PP4210 ABC export system, permease/ATP-binding protein, putativechromosome CDS4754760 1965 + 0.646819
NA PP5173 RND efflux transporterchromosome CDS5897825 3054 - 0.613949
NA PP1896 ABC transporter, permease proteinchromosome CDS2138824 780 + 0.607692
NA PP1272 multidrug efflux MFS membrane fusion protein, putativechromosome CDS1453365 1104 + 0.650362
NA PP3302 RND efflux transporterchromosome CDS3735101 3093 + 0.592629
NA PP2628 ABC transporter, ATP-binding proteinchromosome CDS3007115 1977 - 0.609509
NA PP1517 RND efflux transporterchromosome CDS1721364 3066 + 0.635356
NA PP5208 ABC transporter, permease proteinchromosome CDS5940153 1113 + 0.637017
NA PP4927 toxin secretion ABC transporter protein, HlyB familychromosome CDS5605938 2196 - 0.586521
NA PP0906 multidrug efflux RND transporter, putativechromosome CDS1045331 3045 - 0.61445
NA PP1895 ABC transporter, ATP-binding proteinchromosome CDS2137895 933 + 0.612004
NA PP3583 RND efflux transporter, permease proteinchromosome CDS4065953 3108 - 0.6361
NA PP1561 phage holin, putativechromosome CDS1756038 369 + 0.634146
NA PP1760 ABC transporter, ATP-binding proteinchromosome CDS1961735 1833 + 0.644299
NA PP5262 MATE efflux family proteinchromosome CDS6007706 1389 + 0.640749
NA PP2879 hypothetical proteinchromosome CDS3279483 594 - 0.641414
NA PP0569 MATE efflux family proteinchromosome CDS661615 1338 - 0.66293
NA PP0889 conserved hypothetical proteinchromosome CDS1031905 1137 + 0.669305
NA PP0716 HlyD family secretion proteinchromosome CDS832236 1098 + 0.653005
NA PP2596 ABC transporter, permease/ATP-binding protein, putativechromosome CDS2966617 1794 - 0.657191
NA PP1152 membrane fusion protein, putativechromosome CDS1318775 870 + 0.635632
NA PP2068 multidrug efflux MFS membrane fusion protein, putativechromosome CDS2353251 1278 - 0.668232
NA PP3692 hypothetical proteinchromosome CDS4208044 2676 + 0.539238
NA PP4542 ABC transporter, ATP-binding protein/permease protein, putativechromosome CDS5157903 1833 + 0.621386
NA PP4584 conserved hypothetical proteinchromosome CDS5204194 372 + 0.634409
NA PP3734 ABC transporter, permease protein, putativechromosome CDS4260299 2460 - 0.663415
NA PP3466 ABC efflux transporter, permease/ATP-binding protein, putativechromosome CDS3931764 1710 - 0.649123
NA PP1954 conserved hypothetical proteinchromosome CDS2210607 1167 + 0.562125
NA PP5207 ABC transporter, ATP-binding protein/permease protein, putativechromosome CDS5937431 2721 + 0.650129
NA PP1286 alginate biosynthesis protein Alg44chromosome CDS1470130 1167 - 0.64353
NA PP2595 ABC transporter, permease/ATP-binding protein, putativechromosome CDS2964866 1806 - 0.658915
NA PP2667 ABC efflux transporter, permease proteinchromosome CDS3054830 792 - 0.612374
NA PP3456 multidrug efflux RND transporterchromosome CDS3916216 3129 + 0.652285
NA PP2119 ABC efflux transporter, permease/ATP-binding protein, putativechromosome CDS2416963 1764 + 0.641156
NA PP1976 HlyD family secretion proteinchromosome CDS2238570 1164 - 0.646048
NA PP0804 protein secretion ABC efflux system, permease and ATP-binding proteinchromosome CDS923022 2169 - 0.666206
NA PP4935 lipid/phospholipid ABC efflux transporter, permease and ATP-binding protein, putativechromosome CDS5615647 1809 - 0.607518
PP0130 N-acetylmuramoyl-L-alanine amidase family proteinchromosome CDS136115 789 + 0.614702
PP0167 toxin secretion ATP-binding proteinchromosome CDS191360 2157 - 0.631896
PP0178 efflux transporter, membrane fusion protein, putativechromosome CDS229467 876 + 0.642694
PP0506 ABC efflux transporter, permease protein, putativechromosome CDS594886 1266 - 0.623223
PP0507 ABC efflux transporter, ATP-binding protein, putativechromosome CDS596151 711 - 0.677918
ampC PP2876 beta-lactamasechromosome CDS3276975 1143 - 0.645669
ampD PP0789 N-acetyl-anhydromuramyl-L-alanine amidase AmpDchromosome CDS905988 573 + 0.619546
emrA PP3549 multidrug efflux MFS membrane fusion proteinchromosome CDS4024502 1194 - 0.653266
estC PP1127 carboxylesterasechromosome CDS1291208 1146 + 0.646597
hsdM PP4741 type I restriction-modification system, M subunitchromosome CDS5395521 1470 + 0.580952
hsdR PP4740 type I restriction-modification system, R subunitchromosome CDS5393057 2364 + 0.557953
hsdS PP4742 type I restriction-modification system, S subunitchromosome CDS5396987 1731 + 0.518775
lolD PP2155 lipoprotein releasing system, ATP-binding proteinchromosome CDS2462242 699 + 0.666667
mexD PP2818 multidrug efflux RND transporter MexDchromosome CDS3214083 3129 + 0.652605
mexF PP3426 multidrug efflux RND transporter MexFchromosome CDS3878163 3180 + 0.62956
ttgB PP1385 multidrug/solvent RND transporter TtgBchromosome CDS1578240 3153 - 0.617824