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# Thiomicrospira denitrificans ATCC 33889, ATCC 33889

>Tmden_1305 ABC transporter-related protein
MIEIKNLTKKFGSHVSLDDVSCNFNKNDSVALMGANGAGKTTLIRSILGY
YHPDGGEVFINGLNPIKERTKVLHNISFVPQLPPPIKLSIEELMHYISVS
ADVDKELIKHYANEMKLDISANMNKSFFKLSGGMKQKLLIAISLAKKSNI
IIYDEPTANLDPKARDDFYRLLNKNEEEKTLLFVTHRLEEVRDLVNRQIY
MDMGKVVSDEIF
>Tmden_1315 ABC transporter-related protein
MISLINVVKKYEVNENESVVALDNINLEIKEGQVVVLRGSSGSGKSTILS
LIAALSKPTSGEVLVGGDRVSKLPDNFASDFRRHFIGFVFQKYNLIPTLS
VEENIILPLVPMNLSESEIKAKLQRVLRMFNIEHKASQLVKNLSGGEQQR
VAIARANINNPKIILADEPTANLDKKLSLSFIEIVKELKNEGKTIIIATH
DPLFFGLDIVDVEIEIYQGKII
>Tmden_1597 ATPase
MTKEGIYSQIEKFNINIANSKETKNNKYYYINSDEALLKSQFINEIQKDI
VIKNKLDSIETVMDLCFGSGNLASHILLENQIQYKNIILNDYFLDECNQE
LENLLENCELKQCDFFNSDCFEENSVDLLIFNPTHGGKPTIKDFVNKENK
DFDALNKTLSKILKPNSLVIFRGLKEDFQELIFSKFKYKKIYLEGSQSLY
VCYDIEAEKKDCYEYTNNQFIENENCEIEKSSDEEDLDIGELMQELEENK
IENSFNGVLQSESSIVTNAQNDNEEKFTEWWLSSSYHSVDGKPYAESTKK
GYLRALKQLKTELITFGFDNIDIFKLQDLKEVNELLDRLESGDLYDYNKR
HDNSDTSNGLKQYIKFLKGESNINTFNNSKEEEDNMKDTEIIKIKFSDEG
KGNLDFSYKNILFKGVPGTGKSRAINEIIKNHLELAKNDKNALRINIHSA
SSNSDLMQGIGISTSDKGNIKYSEKQGLILDIIKRATFHPNQPFVLILEE
IQENSLNELIGDLIYLIEDDKRAKLTADNKEYDNYEDLVDKLVDEDDTLD
YVEIPYLVNDSTKYKKMIMPYNLYIFCTSNYRDDKKVIEDNLLRRFEVIE
IYPKETIVNDYAKDFFDKLNKSINAVMEKQGEIHPDRFLIGHAIWKDVEN
KELFYKAFSKLITEFKDIREIEFDVFKSIIEGISLPEDVSIEIENSYYKM
IKDIQSKIHYDFLS
>Tmden_0270 Acriflavin resistance protein
MFERVLKFFIENYKINYTLFFLLFAAGIYAYSQIPKEISPSIEPNSVTIH
GSYAGASVDILNKMAVQEIEDEVKNIVGVDSVTSVVSPGRFTIVLEFDKR
VDKATIIRDAEDAIALIKPNLPSDMDDPVIRGVAHSRSIMHVSIISSKIS
RDKLKLLSKKLKSNLLSVKDISDVTIFGDSDLFYEVLIDEKKVNAYNLSL
DEILRVFSELSYIFPLGKIDNVKEQYYISTQNDKKLSCELENTIININDQ
QIVLKDIAKIEKKYEDSSTLASMNGEDSITLAISQNPKGDAIRIADDVKK
LISEMSVDDVDFNIRMDNSIVIRDRLNIVISNILFGLILITLLTAVLINI
RIALIIALGIPTSFVMGAIYFYFTAYSINVNSLIGVLIAIGILVDDAIVV
SENIQQYIEKGYSAKEAALLGTQEVAKAVTIASLTTLFSFIPLLMLSGKL
GEIIQLIPIAFSALVIASLIESFIFLPIHAAHTLSSNSKTMSWEKINLLY
LRALKKLVGYQKSFLLIFLIIVPALIYYGVKHSKFQMFQPFDTSSINITF
KAKPTTTLEQSLEIVQTLEKNILKEKDRFFVKHVSSTAGYRRSATGTTEI
YPYVGYISIELHNMKPENFVDKYITPYLSFYYDSKDRIRDKSSQDISKDI
REWLKEQDYQERFNLNNLMVVENSMGQTKADIRIGVISDDYKKALSAIRE
IEDGFSKIDGIKYFGDDVKVGTQEIKLKLNSYAEELGITEKYLGTYISGL
FLSRKVGTIFDGKELLDIKVKSFYIKDDLESFAELEIPIKNRGHVKLKDI
CEFEKVESLENLVKDDGETNFYVFANVDPSIITATEVLQMMNPLIDKLKN
TQDIRLKFKGEKEQKETMQTEMILASILAIILIFISILYLFNSLRETLIV
MSVIPFSILGVYIGHFIMGLNISLPSLIGALGLAGVIVNDGILMMATIKR
AKTKEEIFILAPKRFRPIILTSVTTIVGLCSLIFFATAEAVTFQPLAVAM
GFGLLWGTILNLFYLPVTYNFLHGYKNYNKRSKIFKTFE
>Tmden_1469 hypothetical protein
MSKAFQALLTGMFITFILDFFLFLGVLLHYIEFYKIDLYYNILFVDNQNW
YLFFSLSIIFGWMVIYIKNYKVSLIPIVIISIFTFVTLFEDFGYMVGEMM
FMKENITLRSAKFTYIGNIIYEGREEITFYRSDISKIVTLKKKDLI
>Tmden_1594 N-6 DNA methylase
MTMIPNRAKILEKSLCDYYWAYSDILRDIGINESTYDQRIMAFMALKLLI
DNDKLMFTFEYNNNFGLDHAIFAKYDLGETKKTFLNIIKNIEKLGQNLNY
FTQESKYNPDTSKNILTYLNHFKTFELERYIQELPNNYLENVLDIYTYKA
NFRDYPKEQYKDLYEATISRMKKLSGDLTGQHFTQKSIVHLMCEVSKFEA
EGYDKLAIYDPTCGTASMLMESAHYFYNKNKIENIEVYGQELHGQTWLLA
KIFLEISSLDGKSQGIKNTIAYGNTLTNPAFANGINGDTSFDFIIANPPF
GVDWKHNYDEIVQNMSSKKSDFFVVKDEKNKVVTPKKSDGQFLFMQHIIN
LMKSEKRRNKHAHAAIISSSTLISTGNATSSESKIRKEIFNTGFVSAVLE
QPSAMFTNTDISSHIWFLDSDPSEKITIVKADTKEEELFSPHLQAKDKMK
NSYSQKNIRRLATLINSKKEFKYKSKFIDSKDRYEINISNEIGFKDEVED
LNFDELTNELNMLMKEMCEEFQNSSLFGIK
>Tmden_0536 Hydrophobe/amphiphile efflux-1 HAE1
MFSIFFIKRPVFASVISILIVLAGVIAMRSLPIGEYPRVIPPQIVVTATY
QGASAQTISKTVAAPLEEQINGAKDMLYMSSIAADNGTLSISIFFKVGTN
PDDAKIDVNNRVQAALSRLPEQVKRQGVRVNEKSPDMLQVIILNSPKQSR
DVGFLSNYALMNIVDDLKRVKGIGDVTIFGAKDYSMRVWIDPSKLKKYSL
TVSDLVTSIQEQNEQYAAGKLAAEPISNKEMFTYTIETPQRFDDPSQFSE
IIVRANEDGSSLKLKDVATIELGSQSYDMKNKLNNVPAVPILIFLQSGAN
AIETAKEVRKTIASISENFVEDVEYVIPYDITDFVQISINEVIKTFVEAI
ILVILIIFLFLQNFRATLIPVLAVPVSIVGAFAGMYMLGFSINLLTLFGL
VLAIGIVVDDAIIVIENVERHIKEGLSPKEASIKAMQEVSGALIAIVLVL
SAVFLPVAFLGGLSGEMYRQFAVTIVISLAISGLVALTLTPALCALMLKP
IHKEPKYFFKWFNNFFDSATRGYSNALKLTVRYSFLSMLLFGGLIYITYD
MFINLKTGLVPTEDKGTVFVFSYNPPSASLSRTETLTSEIYEIASKEKES
IKNIVQFAGIDFVTFSQRTNSAATILKLQPWDERKDPTQHASYIAADISK
KLSRTSDGFSFGVVPPPIMGMGIAGGFEMYVQNRTGADLKELQKYVNEII
QKANQRAELAGVRTTLNTSVPKYSIKVDTAKAKSKGVNIDEIYQTLNATF
GSFYVNDFNLLGRTYMVNMQAEESFRKTPQDLEKIFVRSVQGEMIPLSSF
VTLKQSVGADLVERFNLFSAAKVSGQASLGYSSGDALKAIEEVSNEVLPE
GYSISWIGTAYQEKQISSAGNLAFIFGIIFLYLILAAQYERWLMPIAVIL
AVPFGIFGAVVANHLRGLENDIYFQIGILVLAGLSAKNAILIVEFAMQKR
AQGMELVEAVLEAAKIRLRPIIMTSLAFTLGVIPLAISSGAGAASRHSIG
TGVVGGMLAATFLAIVFIPLFYILVSKIRNKKES
>Tmden_0537 N-6 DNA methylase
MALYKLEDHVNDWVKAKLEALNLKNQKDYHTESAIPDYLKEALQGRAKTE
KKTNFGKPDFSITKYKQAPIVIENKLGLKKLIEETKDGVKFDEKSISNYA
VNGALYYATGMIASGKYHEVIAIGIAGDGDDAIELKVYYVYGSGENSFKL
LENVSTLDFLENQKTFDVFYKDAILTEDEKHEILIKSQAELQKYSKSLNK
LMHNHNITAPQRVLYVSGMLLSMQNVVDTKGTKIQDGLVPQDLKGVQTES
KRDAIQIVNQIKEFLTARNIPIEKQNLMLSSFYEISKDVQRDELEILDKE
VSKLIDGKASINKQIFTFIYHNIFLSIDAMAGHLDIMGEMYSEFLKYALG
DGKEIGIVLTPPYITKMMTTILGVNQNSKVMDLATGSAGFLISSMEMMID
DAEANYGKETTAAKKKIDIIKKEQLLGVELNAEMFTLAATNMILRGDGSS
NIHKGNTFNTPEQLYTSFKANKLLLNPPFSYDENGMPFIAFGLDKMEKGG
LGAIIIQDSAGSGKATKSNQAMLKKHTLKASIKMPTDLFQPMAGVQTSIY
VLEAHKPHDFEQTVKFIDFRNDGYKRTSRALQEIDEPTKRYADIVKIYKA
GKNAKVEAPWNLNEVYIEDFITPSGSDWNFDQHKTIDSKPTLEYFKKTVS
DYLSWEVSNILKQRGDKGK
>Tmden_1190 ABC transporter-related protein
MPLEESFEQNPLLKCVKNILDFYFGDVSFKTLSAFFIHSNTFDTAQAQEI
LKNFNLSVIEKKISADTIPKHFLPSIIFDAEANPLVFLRKTQDKATVFDP
QDGKEKQIDIKKLKAYKRAFLIFKDTQHVKYLESTENKAWFYEPLKSHYR
AYIEIAIITLFINVFALAIPLFIMNIYNRVVPNQAYETLFVLASGTILVL
IFDVILKYSRTHILDGISKKVGLFWEEELMNKMMLVDVEFDKQLSGSKAN
LFKEIQQIRDFFTNRSLTQIIDFPFFLIAILVIYIISPTVAVIPFIAALL
IMIFNFLMQHPISKLSKNNSENIQSKYSFIFESIQGAQSIKLSNAAPTRM
FLWRNIVAFVDGVGIKIQSLHALSTNISQFILQLVTVLVVIVGVFEISNQ
NLSVGGLIAVTMLASRAMVPIVSLSSILIRLKEMGESIDRVDEFISLPAE
DNSTTEAGIGKIEGKIEFKNVTYKFNNSKHPSIDSVTFTIQPGEKVGIIG
QTGAGKTTLLKLLMGLYKPTSGSIYLDNHDITTIHPVEIRQNIGIMPQEP
FLFNATIKENIELFRPISKTRMMEIITFIGLGDLIKKSGKGDALQVGERG
CNLSVGQRHLVGLARALAPNPPMLILDEPTTGLDMGSERRLIDKLKGGLS
PDKTLLVITHRLAALDLVDRIIVINDGKIVADGPKNKVLQALQTPIKKEM
A
>Tmden_0069 ABC transporter-related protein
MKTEQITLKRLFALILKKRPALVYGQLLTLLGILVSIPIPLMLPVMVDEI
LLNKPAFFVNNIDSIFGGTTPFYYIAIVTFGVVFLRFIYYILGVITTKIF
TKISKHVTFMIRAELLNHLKTTSMNEYETIGSGAITANLVTDVNTLDTFI
MSSVSRFVASVLTLVAVGVVMIAIDPILGFLILIIQPLIMLLSKNMSKKV
GALKKEENQKIETFQNNTAETLELFGQIKASNKESYFFSNAIKDAKEIQN
ASNEYGYKSVAYERLSYTLFLVIFELLRASGLLLVAYSDLSIGMMFAMFG
YIWFIMTPVQDIISMQYSYASASGAIKRLNKILSLEQELSGEKKIDSSEV
DISLKNLSFSYIKGKDILKDISLDIKAGSKIALIGASGSGKTTLAQIISG
FYEKSGGSLKYNGEDSETLEKSSVREKIFLVLQMPILFNSTLRFNISMGD
ESITDEQLLKALEIAELKEMMDGMPNALDTIVGHHGIRLSGGQRQRLSIA
RMIIANPSVVVFDESTSALDVHTEAKLHVSLQPLLKSKTVITIAHRLSTV
KNADTIYVLDAGTIVQRGTHAELEDEEGHYLEFIKNQLL
>Tmden_0478 conserved hypothetical protein
MISLREIRERSIKFAKEWEGASHEKQEAQSFWIDFFKIFDVSPRSMQFEY
PIKKIDGSYGYIDVFWRGQLLIEQKSRGKDLVKAKEQALEYLPNLKQRDL
PKFILVCDFVSFYLYDLDTNQDYKFLLHELPKNIELFSFIAGYTKKTYKE
EEPTNRKAAELMGKLHDKLLENGYSGHQLELFLTRLLFCMFAEDTGIFAK
NSFREFIENQTDESGRDLGSQISYLFELFDTPNEERQKNLDESFTQFPYI
NGSIFTEQLKTAHFDRSMREMLLDACAFDWSLISPSIFGSMFQASMDVSK
RGELGAHFTSETNILKAIKPLFLDELSEEFAKIKNNPKQLQIFHAKISNL
KFLDPACGSGNFLVIAYRELKLVEFEVLKSLKILTQLVHIDQFYGFEIEE
LPSRITQTAMLLIDHQMNLLFAQMFGEPHFNIPIKDSANIFNVNALRVDW
EKILDGVKIDFIIGNPPFLGSKMQSKEQKEDMAEVFSGVKNGKELDFVTA
WYIKSAKYLQGKNTKVALVSTNSITQGEQVGILWQEMFNKYKIKIHFAHK
TFKWNNDAKGVAQVYCVIIGFAGFDIKEKRLFEYESVKSEPHEIKVANIN
PYLVNGDDFFISSRRKHIQSFIPQIVFGSMPNDGGNLLFDDKEKEEFLAL
EPKAELYMKPLISAKEYLNGKTRWCLWLKDCPPNELKSMPKVIERVENIR
KLRNESSREATQKLAKFPALFGEDRQPESDYIFIPRVSSENRDYIPMEFF
TKDFICGDTGLAVPNATLFHFGILTSKMHMDWVRYVAGRLKSDYRYSNEI
VYNNFPFPLEINDKQKDQIEQLAQNILDIRAEFVGSSLADLYNPLTMPPK
LLKAHETLDRAVDKLYSKTLFKTDTERVAHLFELNKQLTSLIVENEKKAK
KVKKIITK
>Tmden_0591 ABC transporter-related protein
MFKRYLPYIKEYKKEYFLVVIGMLFTVAATTATAHIMKPLMDEMFIEKKE
EMLYLIPLGLIGIYFFKSIGRYIQSVYMTYIGQHIVSRFREMMLEKIINF
DMMYLYQNRSGELISRVTNDIDRIRYFVSNMLPELIRESLTVIALVAYVI
YLNPMLSFYSLVLLPLAVYPIIQIGKKLKKYSRRSQEKNADVISRLTEVF
NNSEIIKANATQKFELERFGVQNWQFFKINMKSVYVGDIVSPLMELVGAA
GLAAVIYIGGREVYSGNMSVGEFSAFLTAVGLVFQPIRRIGSIYSKIQDA
LSASERVFELLDKENKIVDGKKVLKEDITHIEFRDVSLKYEERYILDGVN
IEIKQGQNIALVGDSGGGKSTFINMLLRFYDPQDGSVLVNGINIKEFTQD
SLKHHISLVTQRIYIFQDTLAANVAYGQDIDEKRVKDALILADALSFVES
LEDGIETKMEEFGSNLSGGQRQRIAIARAIYKHASLILFDEATSALDNES
EKRIQEALHNYTKDKITITIAHRLGTIQNADKILVVQKGKIIASGSHSEL
LESCEVYQRLAGGLKK
>Tmden_0876 cation efflux system (AcrB/AcrD/AcrF family)
MFKKFQDTVFEGIQNPKKRNFILIATFIAFVLSVLMIAPSKMVLAKMLPG
KNNDTFTIYATLSEGSSIEQTSRVSECVAKYLKNEKEITDFEIFLGMGAP
LDFAGLIKGSHFKNSENVSEIVVNLTKKHHRDEPSYFMVQRIRPEIQNNC
TKLYEKTTITFVEPPAGPPVLAAIVAEVYGQDSDGVRLLSNRVKEVFEKT
SGLVDIEVMQDEIYDTFEVEVDSTKVSLSGVNIKQLNDVLYLAFEGMQIA
VKNSSTINDQIPIYLSLSKESKKFSSKDINDIKAKLSSLKLMNQMGMMTP
LTELVTIVPKKSNPMIMSKNLHKMTNVMAETDMVSQVYPLMEARNTILDT
FNDKYEIEKIGLFNLRLVDKASKDVYELIWDGEMEVTLDTFVELGAAFIA
ALVLIFLLMVIYYKSYALSGIILLGSFLSIIGVIVGHYIMDIFTADTFFL
TATSLIGFIALIGISSRNSLLLIDFTASLMRDSKMKKAEAIAYATATRAK
PIFLTAAAIILASTLLAGDAVFGGLGVALIFGTIAAVIASLIIVPILLYK
SDLNRHFNLDEI
>Tmden_1316 Protein of unknown function DUF214
MTPHLESTLLQHTYIRQMMQNKINFYIVEYAINSLLRQKYKTIFISIVFS
MLVFLLSSLFFITNSIKYELKQTLEALPDITVQKIKGGRHYDIDVSTIDE
ILDIHGVSGAVARVWGYYYFENAGVNFSLVGIDEYEEQYKKSFVDVAANL
DFTKPSMIVGEGVKIVMDKNYYKDYFNFIKPDGTLKRVDIAATFKAQSEL
ESNDVIVMSKENVREIFDISAQKATDIVVRVANFNEVATVASKIKLLYPD
TRVITKDDLKISYQNIFDYKSGIFLALFSVSLFTFFIIIYDRVSGLSSEQ
KREIGILKAVGWRVDDVLKEKFYEGFIVSIFSYLVGITLSFAFVYIFKAP
LLQNIFLGYSQLKTSFNLPFVFDMQTLALIFFLSVPIYIAAIIIPSWRSA
TLEADEVIR
>Tmden_0072 Undecaprenol kinase
MTILDSIILGAIEGFTEFLPISSTGHLIVASEFLGLEQNAINKAYEVIIQ
FSAILAVIFNYKDKFSIKKIDLWMKVFIAFLPLAIIGFIFSTQIKELFSL
HVVAVMFIVGGVVFLIVEKFFINEDEKTIYEVEAISLKQSLIIGFAQIFA
LIPGTSRAGSTIIGALLVGLSRKASAEFSFLLAFPVMGAVTAYDLLKHYK
DFSEANLIILGVGFVTSFVVAYLSIKLFLKFLEKFTFFFFGVYRIVFGVI
LLLFFN
>Tmden_1799 ABC transporter-related protein
MNLLSAKNLSHTFDYELFSNISLDLQEGESVAIIGVSGSGKSTLLNILST
LLKPDRGSVEIFDENVSTMSKKRLWEIKRDEIGLVFQSHYLFKGFTSLEN
LEVAAILSKQEIDESLLKRLHIDNTLEQKVTELSGGQQQRVSIARVLTKK
PRLLFVDEPTGNLDKTTANEVMNIFFEYLQKYNAGMVLVTHDEELAARCD
KVYKLLNKELERVN
>Tmden_1499 Acriflavin resistance protein
MGINSYINIPKEMFPDMELDKISVMGSYKGASANTMDKMAVRDIEDSLSD
INGIDKSETTISPGAFAIVLTLSKGANRELTLSRVKDSVALSRQNLPSDM
NEPLTTLLEKSKPLIKLAISSSVLSIGQLSVIAQDMKSKAAKVPGVSEIL
IRGDSDEQVTIKINSEALLAYGLNHGAVLGAISNLSYIFPIGDIEQRGNF
VFISTANGKADVNGYRDAILNIDNRYVKLSDIAEISIEYPQIDTLATYNG
KKTISLNISKGVSGDAIVLSKRLQEYVLAQQKNYKDVDFTFYEDSSKPIK
DRLDIIISNLMLGLILVFLSLYILINLRIAIIVALGIPFSFLIGITFIYY
MGYSINVVSLLGALIVIGIVVDDAIVVSENIQRYIDEGVDRLEATIRGTK
EMLLPVTLATLTTVVAFLPIFMMQGETALFILLIPITVIIMLLGSLIESF
LFLPLHANEYLRKSNNRVNWIPLQNMYERVILRFLHFKKISLFFFLVLIP
IISIYMASSMKFQFFPNFDGNFLYISGKVDINTPLEETYKISQEIEDELV
KHKEEFSLKAISNIIGYRRSLSGETQRNSGVFMITMELHDRASTNFVDSY
ITPILNLNFNFNDPLKIRKEQTYELSPRARDIIKEFKNRYNMEDLGVMED
KPGLIRSDIEISLSGMNDELLQDGIKKLEEKIESVEGIRNFSDNIKLGKM
EYKIKINSYGESLGLSEASIARTLSAYFLEQKQSTTFNERGVMEIKTEDI
KKDSIDTFLNFSIPFGEGKSVKLTQVADIIEIRDYEKINKLNGSIIKTFF
ATIDKRKTTSQEVLDKLEPTLDELRASGIDVMLLGEKEKKEQLRNDMQKA
IFLALFLIFLSLLLIFSKVKYALMVMSVIPLSVLGALVGHKILGINLSMT
SIIGILGLAGVVVNDGIIMLDFLHGTHKLEEFLLRAKLRLRPIIITTLTT
FLGLFTLIFYATGQAVILQPIAISIGFGLIWGTILNLVYLPTLYALVNKI
EKKAI
>Tmden_1595 hypothetical protein
MIGTLDSQVIEKFKEFQEKTGKYADLDINKVLFDKKTIDDIVDDFIKGST
PKYSHNPTDTMVIKSGQARGNYNEFNFTKTAYLDLSKVKNPKYLQKGDIL
INTTGVGTCGRVTHFSILMEITYLIVI
>Tmden_0700 ATPase
MTKEGIYSQIEKFNINIANSKETKNNKYYYINSDEALLKSQFINEIQKDI
VIKNKLDSIETVMDLCFGSGNLASHILLENQIQYKNIILNDYFLDECNQE
LENLLENCELKQCDFFNSDCFEENSVDLLIFNPTHGGKPTIKDFVNKENK
DFDALNKTLSKILKPNSLVIFRGLKEDFQELIFSKFKYKKIYLEGSQSLY
VCYDIEAEKKDCYEYTNNQFIENENCEIEKSSDEEDLDIGELMQELEENK
IENSFNGVLQSESSIVTNAQNDNEEKFTEWWLSSSYHSVDGKPYAESTKK
GYLRALKQLKTELITFGFDNIDIFKLQDLKEVNELLDRLESGDLYDYNKR
HDNSDTSNGLKQYIKFLKGESNINTFNNSKEEEDNMKDTEIIKIKFSDEG
KGNLDFSYKNILFKGVPGTGKSRAINEIIKNHLELAKNDKNALRINIHSA
SSNSDLMQGIGISTSDKGNIKYSEKQGLILDIIKRATFHPNQPFVLILEE
IQENSLNELIGDLIYLIEDDKRAKLTADNKEYDNYEDLVDKLVDEDDTLD
YVEIPYLVNDSTKYKKMIMPYNLYIFCTSNYRDDKKVIEDNLLRRFEVIE
IYPKETIVNDYAKDFFDKLNKSINAVMEKQGEIHPDRFLIGHAIWKDVEN
KELFYKAFSKLITEFKDIREIEFDVFKSIIEGISLPEDVSIEIENSYYKM
IKDIQSKIHYDFLS
>Tmden_0948 Type I site-specific deoxyribonuclease HsdR
MNDNITLEQVIQQNCINLLSHKEFGYKFITKEDNLIFRENKTSTVLLKKM
LIERLYALNSYEYKGQNYKFSANNIAKAVEDLDVSLNEGLIVANEKITNH
LLLGTSYEENLDDGTKKSFSFRYIDFENIENNHFFVTEEFIVDRANQNEI
TKTRRPDLMVFVNGIPLVVIELKKSSLNYENGIKQLEKEQKKDEIPHLFK
YIQLTIAANSNEARYGTMGTPLKFYSLWKEEESEKAKTTLKTMIQNREVT
SLDLTLFALLSKDRLLRLIRHYILFDKKVKKVSRYQQFFGIEKTLKRVEK
ITDGIRAGGLIWHTQGSGKSLTMVMLTKLLKLTYTNAKIIVVTDRVDLDE
QIHKTFENTDIKAGRASSGSDLIEKLQSGISVITTLVHKFEKVRNSKTVI
NDNNVFVLVDESHRTQGGDLHNAMKKALPLACYLGFTGTPLLKKEKNKNS
FLKFGGEIHRYTIDDAVKDGAVLPLLYEGRLVDQEVLSPDGLVRKFNMIA
RELSDDAKRDLQHKWARFQKVASSEQRLELIALDINEHFKKTLKMSNSGF
KAMFATSSKYEAIKYHEIFEEYGDIRTAYVISSNEHEELDGGNKEYVAKA
WQETIKNYGSEEEYLKYVKNEFIHGDEIDLLIVVDKLLTGFDAPRASTLY
IDKQLKEHNLLQAIARVNRLYDGKDYGYIVDYRGLLGELDQALTNYASLD
GFDPEDLTGAVVDVRSEIAKAKTYYTHLEDLFSDVKFKDDLESYVVVLAD
IQKRDDFKEWLSHFSRAFKLGLSSEKIDDILSENEIKLYKKKIKFYNELR
KVVQLRYHETCDFGKYEEQMQKLLDTFVSAKEVNELTKLVNIFETEFEEE
VQRVEGKSAKADTILSAVSAVVKEKMESNPAFYKSIAQQIEDVINEYNAK
RLSEEEKLAKAKQLKDLMTGMSKPNEDKYPKEFENKKTLLAIYDNLGDIL
GNLEVVDFELIVKNLTLKFDEIYSGASKKPEWHKNKDVENEITSAMEDVL
WDIEDEYDISIENKEKIYQTIRGIGISFYA
>Tmden_1789 negative regulator of AmpC, AmpD
MYKFIILYVLFNLSLFAIEIKQTPIKFEEKRVNLTKEYIKYHYNLDVKDI
KITPKIIVIHHTAIDDFNASLSCFKDQTLPNARADIHRGGALNVSAHFIV
DRDGTIHQLMPLDIMARHVIGLNYNSIGIENVGGQNSKDNLTPEQLRANI
ELVAELKRRFPEIDYVIGHYEYRCFEKDELWLEVDKKYRTYKDDPSSRFM
SAIREQIEGFKNSPCKDTK
>Tmden_0877 AcrB/AcrD/AcrF family protein
MMIHYKPTDIAGKLASGFLRNPLTIVLGVFLLLIGYLALNIMPREENPQM
VVSGSTVIVALPGASAAEIEKAIVKPLERKLKEVKGVENISSMAMDNVGI
VNAAFYIGEEKENSNLKIYDKIMQNYDMFPKGAMNPIIKPLDIDVDIPVL
SVAFYSKDANMSKTELYERVKDIQHHINGLSNVAVTELKGGNKHQFNVEV
DLNKLSGYNISMGQIVQGVQSLSYSVPAVKNRTKDNEIVMLGVKNAIESA
DDIGNIIIAQYMGSPIYLRQIAKVSASYDIQNFKSATISKKSENEEFSEL
QNQVTLTVSKLQGTNAVVIADAVKSDLESYKEFLNNNNIGYVITRNDGER
ANEAVNELVFHLLLSIVIIAILLIVVLGWRESLIVTFTVPAILAITLFVA
YLTGQTINRITLFAFLLSLGLLVDAAIIVIENIHRHYHSRESANKSVDDI
MIEATDEIGPPTNIATLAIIMTMVPMAFVGQMMGQFMKPIPANVPVALVA
SLFVAYIFTPYLAARMLKKPEFHSEEKH
>Tmden_2043 Protein of unknown function DUF214
MIQNAFFLAFREIRRSAMRSILTTLGIVIGIASVIAMVMLGDATTAFITQ
NISKLGTNMLMVIPGQERKGPPSSSLMAKKFTHSDIEAIKKEIANLRGAA
PVGSTMIRAVYGNQNYSTTIEGSNNDYFIVKDWVFASGRNFNETELRSGK
AVCVIGESVKKELYGDLDPIGTSMRLENFSCEVIGLLESKGAAMFGMDQD
DIIVAPIRMFQRRISGNQDISRIMLSANSSENIEDVKASTIMLMQERRRI
GLNQDNDFFVHDMREMVQTLSSTTKMLTILLGAVAAISLLVGGIGIMNIM
LVSVTERTREIGIRLAIGALEREVLLQFLVEAVVLSSLGGVIGIVLGISV
GVGATIFFDLPLIVNTYIIIIAFLFSTCVGVVFGYFPAQKAARLNPIDAL
RHE
>Tmden_1363 Protein of unknown function DUF214
MIDLAAKDIKHTLGKFLVTAMGVGMLLGIVLIMIGVYRGMMADAETLLND
IKADLWIVQEDTLGPFAESSRVYRDMRETIYVMQGIEKSEAMTFQNIQLP
SREKPVRVVAVGYDIYGSINPINEARLVAGRALKNEHYEIVVTDKTGFEL
GEIIKLGRNNYTVVGITHDTVSNGGDPLVYLNLKDAQELQFLYSNKEIQN
SVARGVKNSESDMVNVIIARVKSGYDIEEVASEIRKWQHKSVYSAKDQKE
ILTKNLIEKSSKQIGLFTAILVVVSTIIIALIIYTMTLEKMKEIAIMKLM
GLPNSIIISMIVKETLLLGVFAFIFGNIFSHLTYDKFPKRIVLEIPDAWM
LFGVIIIASILASFVGVKKVISADPAAAIGG
>Tmden_1364 ABC transporter-related protein
MEKKSAIKIKKLVKNFGKNDSLVKVIDNASFEINKGELVALIAPSGAGKT
TLLMMIGCVLEPTSGEIWLGEEVVYNNKWIAKDTRRIRREKIGFIFQAHY
LIPFLNVIENITLLPQVNKVSEKEAKQKAMELLEYLEIADKAHAMPSQLS
GGQNQRVAIARALANNPEIILADEPTAALDAHRSISVIKMLKKIAIEQNV
AIITVTHDERILPYFDKIMKIQNRGIVFEELDENQIL
>Tmden_0942 Type I restriction-modification system M subunit
MQKTTQSTINNVVWKACDTFRGTMDGSDYKDYVLTMLFVKYLSDFYKEKL
DLLKAEYGDKTDRIEAKLKREKFRLDESCTFDYLIKHKEAPNLGEIMNKV
LERIEEDNRDKLEGIFRSIDFNNKNKLGDTKERNTILKNLIEDFSDTRLD
LRPSRLEGNDVIGDAYEYLISHFASDAGKKGGEFYTPSEVSTLLAKLVEP
KEGEMIYDPTCGSGSLLIKASKEIGSKNFRLYGQEKNGQTQALCKMNMFL
HEINDAVIEWGDTIRNPLHLQDNLLKTFDVVVANPPFSLDKWGEEIASDD
SFGRFKYGTPPKSKGDYAFVLHMISSLNSHGKMGVILPHGVLFRGASEGK
IREKLIEQNLLDTVIGLPSNLFFGTSIPACILIFKKNRVHNDILFIDASR
EFEKGKNQNNLTDEHIAKIFDTYKNRSEIEKYSHVATLEEIQENDYNLNI
PRYVDTFEEEEIIDLDATKTNIATIEIELVEIKSKMNGYLKELGL
>Tmden_0941 Restriction modification system DNA specificity domain
MKIKLNDIAEIKTGLVLNRKKADMSKDQKLYYSVVSLKSFNEDAVYDNTF
ADEFISNEQIKEDYLVKQGDILLRLREPNFAVYIDKEYENLIYPSLMVRV
KIQDTRLDPHFIAHYLNSTIVRRALSTELSGTTIPMIKVADVNKIKIPLI
NLDKQKKIVEYLKLAHQENELLQNLINQKQKYSKEIFETLALQGE
>Tmden_0799 Acriflavin resistance protein
MIRRFLEFAIDKPLLNHILLTFIFVLSVFSYINIPKEIFPPMNMDKVTIS
GGYVGTSADVLDKMVVKTIEDDLQNIAELDTIKTTIKNGSFVIIADIKPN
SDNANVLNDVKDIVGSVKKDLPADMAEPIAKIKLHSFPLALVALVGDKPK
GELLQRAEELKSELSKFKELSEITIRGDADEELVINIDEQKLLAYGLKPA
LAVEAIKNISSVFPIGTIKERGSHLYISTYNGEKNKDAIEETIISVGGIK
VRIADIAEVEFKLSDQSELSHYNGVRNISINIAKSEDGNAIELVKRVRTL
LKEQEKLHADLEYKIYADTSIWIKNRLNTVFANIVFGLMFVFLAMLLFVN
RGIAFVVAIGIPVSFMIGLIASELMGESLNMLSLLGALIALGMLVDEAIV
VAENIYRHLEEGMDRREAAIVGAQEMFPAVLTATLTTIFAFLPMLLLSGE
MGMFIKIIPIMITVLLLSSLFEAFYFLPLHAYDFLKVSQEDSFTKKIWAK
LSSWHNAVLHFLFRRKHISLILIVVTILSLSAIMAKNAKFQLFPDFDTTQ
VYVYGKVNVNNELEDTEAIVTELEKELLKNIKGDDIASITSIIGFKLDAK
NMVETGEHLFHIFIDLSERAPDNVFDKYISPYLSIEYDKEALKRQKDAVD
IAKDVQKVVEPFLDLKSSDKKVFEELVVKVPGAGVVASDIEISITANDEQ
KILQGVEELENALHVIDGVNNISNDATLGERELKLRINEYGQQLGFNEEL
ISRELRSYYLKGEYGKMFNENGLVRIKIESLVNQKIDSINSIEVQIPSSD
KFVLLKDISDFIMTQGFVALQKENGTRIRTVMASLDKKIVTSAEAMKKLE
PTLKNLKEKGFVVDIKGEERENAKNKREILQSALIAIFLIFITLVWLFDS
IKKSLIIISTIPLVLLGVLFGHMVMGINITMPGLIGIVGLAGVVVNDGLL
VVSFIKNATNTQELMKQAQTRLRPIFLTSLTTVLGLSTLIFFASGQAMIL
QPMAISLGFGIAWATVLNLIYVPLLYAVIFKIKDTQPSEKYKLG
>Tmden_1359 Multi antimicrobial extrusion protein MatE
MLMVGMISISALAAVGMSMQFMMVINVLMTLYVVGGNALISRFIGQGRKR
RASSLLYSLLIVASILSIFVTIGGYFGSKYLYAIMGAQGDVVEQGALYFK
ILSLGIILVFIDTLIYNALSAAGDTKNSLYIKLVSAAINAFLNYVFIFGH
YGFDAMGIEGAAYATLMAYCFNLLAYYILLKKPYSKLNIIPIIRIKDIIR
AWHVGWSAALERGISSISFLFFVSIIAAYGTAELAGYQVGLRIEGIAFMP
GFGFAIAATALVGQSLGANNREKAYKMGIISGRVAYIFMGFVGFFLIMFP
EFLVGFFTQDAQTIAVASYYLIFVGLAQIPLAIMFVYSGALRGAGATKTT
LKVSIVSLWIFRVIPSYIAYKMGYGIVAIFIIMNVETLIKGIIYVYIYKQ
KRWLDTKI
>Tmden_0698 hypothetical protein
MIGTLDSQVIEKFKEFQEKTGKYADLDINKVLFDKKTIDDIVDDFIKGST
PKYSHNPTDTMVIKSGQARGNYNEFNFTKTAYLDLSKVKNPKYLQKGDIL
INTTGVGTCGRVTHFSILMEITYLIVI
>Tmden_0787 conserved hypothetical protein
MKSVKNHLSLVIALLSILFSMQVFFIVDRAIDAYKITLSKNYSVIAVSKK
ELSSDEFKKINNIISNIKEISPDSVIKRLSSDMKSTNVELLKLTLPKFYK
LSLEYYPSPAEVKKLRDDLLENSSITKVEDFSHNHDTVYKLLLLFKNVVS
LFSIVVLIVTVLLIFKELRIWQYKHNERMSIMGLFGAALWLRSAVLFRLS
IVDALIASIVSIGAFVYLSSYPWIIEQFRSIGIEVVIFNPIDDSLVIIGV
AMSISIVLASLIVLGHKEEA
>Tmden_0697 N-6 DNA methylase
MTMIPNRAKILEKSLCDYYWAYSDILRDIGINESTYDQRIMAFMALKLLI
DNDKLMFTFEYNNNFGLDHAIFAKYDLGETKKTFLNIIKNIEKLGQNLNY
FTQESKYNPDTSKNILTYLNHFKTFELERYIQELPNNYLENVLDIYTYKA
NFRDYPKEQYKDLYEATISRMKKLSGDLTGQHFTQKSIVHLMCEVSKFEA
EGYDKLAIYDPTCGTASMLMESAHYFYNKNKIENIEVYGQELHGQTWLLA
KIFLEISSLDGKSQGIKNTIAYGNTLTNPAFANGINGDTSFDFIIANPPF
GVDWKHNYDEIVQNMSSKKSDFFVVKDEKNKVVTPKKSDGQFLFMQHIIN
LMKSEKRRNKHAHAAIISSSTLISTGNATSSESKIRKEIFNTGFVSAVLE
QPSAMFTNTDISSHIWFLDSDPSEKITIVKADTKEEELFSPHLQAKDKMK
NSYSQKNIRRLATLINSKKEFKYKSKFIDSKDRYEINISNEIGFKDEVED
LNFDELTNELNMLMKEMCEEFQNSSLFGIK
>Tmden_0786 ABC transporter-related protein
MNKVIIAKDLSLAYSNNETIINKANFSISSADFVFITGASGSGKSTLLKS
LFGALKLKHGSLVVGGVELSNVSRSKLNFLRRHIGIVFQDYKLVKEWSID
KNIMLPLLINGYVKGVAQNQVDKLLKHVRLNHQTGKYPLELSGGEQQRVA
MARALAHNPILILADEPTGNLDEYSSGLIWNLLEGANEQLKTTVIVVTHN
IPKTLNVNYKHFHIEYGSIHEVC
>Tmden_2042 ABC transporter-related protein
MTLDEKEAVISLHKVVKSYGSAEATTYALRGVNLEIKRGEFVAIMGPSGS
GKSTAMNIIGCLDTLSSGDYLFGGVDIQKLSLDQRTLLRRNYIGFIFQGF
NLLGKTTAIENVELPLLYRGFPARQRSEMAMNALRSVGLEQVAHHTPAEL
SGGQQQRVAIARAIVTDPFILLADEPTGNLDTAKSREIMELLSSFNKEKG
LTIVMVTHENEMASYASRIIRFRDGKIDDTLHVEKA
>Tmden_0951 Beta-lactamase
MKPFMHSFIFSFILIIFTTTTLFANELNQKIEEIFSKADTNATFVLYDMQ
KQKLIIHNQARAQKRYTPASTFKIANSLIGLETKAVKNIDEQIPYLGPEN
PFIASWKEDMGLRKAIAISNVPIYQELARRIGLKRMKHYLKIFEYGNADT
GAIIDRFWLDGPIEISALEQVEFLKKLVKEELPISKEAQRDVKQILLFES
ADDYKLYAKTGWQNAPDSGIGWFVGWIENAEGSYIFALNIDMKGANDAPK
RISLTKDCLFALGLLKDL
>Tmden_1367 hypothetical protein
MVKAIFIITLFLSSLYGSTFKKNCLSCHENDFKFNMIIKKYTQKYSSEKK
IKEAIFEYLREPTIEKAILPYEYINRFGIKAKSNLDDKTLREMVDIYYEM
FNIKSKIY
>Tmden_0944 Restriction modification system DNA specificity domain
MSEIKQGYKQTKVGIIPEDWEVVKIKEATSYVDYRGKTPIKTGKGIFLVT
AKNIKQGFIDYEASSEFVSEVEYHEIMKRGMPKIGDILITTEAPLGNVAQ
IDKENIALAQRVIKFRSKKNVKNDFLKHYFLSNRFQSYLYRMAIGTTVLG
IQGKELHNMSIVLPPLKEQEKIAQILTTWDEAITKQTELLEAKELLKKAL
MQKLLSGEVRFSGFSDEWEEARLDKLVFFQEGPGVRNTQYRKSGVKLLNV
GNLNNNTLNLSSTETYISEEEAYGAYKHFLIDEGDLLISCSGINSESFKK
KIAFAKKEDLPLCMNTSTMRFKNLKNKLLLEYLYFFFQTLFFEKQVFGVL
TGSAQFNFGPTHIKWFKIKLPTLPEQQKIAEVLSVADDEINQLKSELEEL
KLQKKALMQQLLTGQVRVKV
>Tmden_1440 Acriflavin resistance protein
MYKLSIKRPISTLMYVLTLVIFGYMSFKAMPSALFPNVDFPIVTIQTNYA
GAEASTIESQITDKVEEAISRIGGIDSVISSSSDGVSIVTVKFFLERNID
EATNDVRDKVASIRLPSDAEVPLVSKLDIGGASIINIFLTAKSDTLQNLM
LFADEKVKPAVQKINDVGAINIIGFRDREIKIFPNPQALNKYEITIAELN
NAITEENVKIGGGKLITKTKEFILKTKADALSIDELKDIKIKDNIKLRDI
AAVEDSLSDAKSYASYNGVEGVMLEVQKISGTNTIEIIEHVKKIVPSLQV
MAGDKFGVEVLNDTSTFIVNSLSDVEFDLIYGAILASIIVFIFLRNLTIT
LVSALTIPSSIFGTFALMDYMGFELNKMTLIGLTLAIGIIIDDAIVVIEN
IYKKMEEGLGKYEAAYEGTKEMAFTILAISAMLLAVFVPVSFMSGIVGKF
FESFAMTVGFAIIISYTIALSFIPSLSARVLRKDESKFYNMTEPFFRAIE
RLYEAILKKVLRFKYLVLFGVFLLFFASLSLFPKIGMDFIPKEDKSEFEI
KIKADASISLEEMVKKSKTVEDLVRKNPNVEYTTLSVGYNTTKEKHKALI
YIKLTPKDKRELKQEQIIQEFRKNLEPFKADMLITASEIPNIKGAGASVP
YQIVLKSDSFEDLERGKENLIEHLRKKDGFMDIDTDLDDQKQQIDINILR
ENASLYGVMASQIAEAIAIAFSSDLEISYFEESGKQYNITLRFSDESRVS
IADIKKLHVRTKDGKLIYLDGLVEFKDSYALGAINHFDRQREVTIFADLF
GLDLGSSIEYTKEKIDSLLPSGVEYRFTGFAEEMGKTADAFGVAIGLSVI
LMFIILAILYESLIQPLIIMVALPLSIIGVILALYISGLQFSLFVMIGFM
LLMGMVGKNAVLLVDFANHAQEHGKGTDEALLEAGRKRVRPILMTTLAMV
FAMLPLAISSGLGSEIKAPMAISIIGGLLSSMFLTLLVVPVMYKIISPLD
IWLRKFYETKMIA