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2024-05-07 01:22:21

Gene list

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COG category: Defense mechanisms
Organism: Rhizobium etli CFN 42, CFN 42

Number of genes found: 51

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Rhizobium etli CFN 42, CFN 42
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA RHE_CH03412 probable multidrug efflux transporter proteinchromosome CDS3585922 3111 + 0.608807
NA RHE_CH02962 probable multidrug efflux proteinchromosome CDS3096164 1404 - 0.624644
NA RHE_CH02374 putative multidrug resistance ABC transporter, ATP-binding and permease proteinchromosome CDS2481141 1839 + 0.623709
NA RHE_CH01377 probable toxin secretion ABC transporter, ATP-binding proteinchromosome CDS1449463 2145 + 0.62704
NA RHE_CH03199 putative surface saccharide ABC transporter, ATP-binding and permease proteinchromosome CDS3361426 1860 + 0.582258
NA RHE_CH03040 probable ABC transporter, ATP-binding proteinchromosome CDS3179729 1914 - 0.62069
NA RHE_CH00958 probable chloranphenicol phosphotransferase proteinchromosome CDS1007024 642 - 0.629283
NA RHE_CH01989 hypothetical proteinchromosome CDS2076046 633 + 0.417062
NA RHE_CH02865 putative 6-aminohexanoate-dimer hydrolase proteinchromosome CDS2993266 1422 - 0.654008
NA RHE_CH01192 probable multidrug resistance efflux system proteinchromosome CDS1245365 1191 + 0.629723
NA RHE_CH03251 probable ABC transporter, ATP-binding protein (consisting of 2 fused ATP-binding domains)chromosome CDS3418762 1746 + 0.647766
NA RHE_CH02076 putative ABC transporter, permease proteinchromosome CDS2169924 1203 + 0.655029
NA RHE_CH00171 probable multidrug ABC transporter, ATP binding proteinchromosome CDS184702 1788 - 0.628076
NA RHE_PF00045 probable sucrose ABC transporter, ATP-binding proteinp42f CDS46008 1764 + 0.619048
NA RHE_CH03357 probable protein secretion protein, HlyD familychromosome CDS3524860 1218 - 0.626437
NA RHE_CH02980 probable antibiotic resistance (streptomycin kinase) proteinchromosome CDS3120955 801 + 0.641698
NA RHE_CH03299 probable acriflavin resistance protein (transporter protein)chromosome CDS3462053 3321 + 0.613972
NA RHE_CH02028 probable saccharide ABC transporter, ATP-binding proteinchromosome CDS2121707 1791 - 0.617532
NA RHE_CH02607 hypothetical conserved proteinchromosome CDS2720613 1200 - 0.668333
NA RHE_CH01304 probable multidrug efflux transporter protein, AcrB/AcrD/AcrF familychromosome CDS1357438 3126 - 0.629239
NA RHE_CH02608 hypothetical conserved proteinchromosome CDS2721847 1140 - 0.617544
NA RHE_CH04108 hypothetical conserved proteinchromosome CDS4357988 1644 - 0.613139
NA RHE_CH02860 probable N-acetylmuramoyl-L-alanine amidase proteinchromosome CDS2988371 675 - 0.61037
NA RHE_PF00284 probable efflux transporter protein, acriflavin resistance protein familyp42f CDS314504 3072 - 0.621094
NA RHE_CH00236 probable restriction system proteinchromosome CDS252008 750 + 0.552
NA RHE_CH03784 putative endonuclease proteinchromosome CDS4011175 558 - 0.591398
NA RHE_CH02075 putative ABC transporter, ATP-binding proteinchromosome CDS2169218 717 + 0.642957
NA RHE_CH02812 probable acriflavin resistance (multidrug efflux transporter) proteinchromosome CDS2928455 3156 - 0.644487
NA RHE_CH03422 hypothetical proteinchromosome CDS3599753 1632 - 0.594363
NA RHE_CH04096 hypothetical conserved proteinchromosome CDS4339619 1272 - 0.648585
NA RHE_CH02609 probable peptide ABC transporter, ATP-binding proteinchromosome CDS2722983 702 - 0.609687
NA RHE_CH03252 probable ABC transporter, permease proteinchromosome CDS3420504 1128 + 0.639184
NA RHE_CH01625 probable lipoprotein ABC transporter, ATP-binding proteinchromosome CDS1706286 684 + 0.635965
NA RHE_CH03042 probable ABC transporter, ATP-binding proteinchromosome CDS3182127 1857 - 0.609585
NA RHE_CH03687 putative multidrug efflux transporter proteinchromosome CDS3904434 3147 - 0.634573
NA RHE_CH00528 probable cation/multidrug efflux transport proteinchromosome CDS545017 3111 + 0.619094
NA RHE_CH03507 probable multidrug ABC transporter, ATP-binding proteinchromosome CDS3694304 1728 + 0.667824
NA RHE_CH03652 probable multidrug resistance efflux proteinchromosome CDS3867175 1218 - 0.634647
NA RHE_PF00551 putative multidrug resistance efflux pump proteinp42f CDS616375 1152 - 0.634549
NA RHE_CH03253 probable ABC transporter, permease proteinchromosome CDS3421633 1113 + 0.619946
aacC1 RHE_CH01086 aminoglycoside N3`-acetyltransferase proteinchromosome CDS1136589 873 + 0.655212
ampC RHE_CH03194 beta-lactamase proteinchromosome CDS3353803 1062 + 0.619586
bla RHE_CH01220 beta-lactamase proteinchromosome CDS1271136 891 + 0.655443
dinF RHE_CH00541 DNA-damage-inducible F protein (Na+ driven multidrug efflux pump)chromosome CDS557926 1344 - 0.662202
hndI RHE_CH02452 multidrug ABC transporter, ATP-binding proteinchromosome CDS2561320 927 - 0.588997
hndJ RHE_CH02451 multidrug ABC transporter, permease proteinchromosome CDS2560562 762 - 0.562992
mexF1 RHE_CH03348 multidrug-efflux system, acriflavin resistance proteinchromosome CDS3513862 3201 - 0.625742
mexF2 RHE_CH03361 multidrug-efflux system, acriflavin resistance proteinchromosome CDS3529741 3186 + 0.611425
ndvA RHE_CH04000 beta-1,2-glucan ABC transporter, ATP-binding proteinchromosome CDS4233809 1782 - 0.617284
upk RHE_CH00310 undecaprenol kinase proteinchromosome CDS318411 798 + 0.610276
vbsD RHE_PF00460 efflux transporter inner membrane proteinp42f CDS519260 1419 + 0.651163