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2024-05-03 03:11:18

Gene list

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COG category: Defense mechanisms
Organism: Shigella sonnei Ss046, Ss046

Number of genes found: 41

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella sonnei Ss046, Ss046
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SSO_2519 putative beta-lactamasechromosome CDS2656953 1392 + 0.51796
NA SSO_1512 putative membrane proteinchromosome CDS1589793 900 - 0.501111
NA SSO_1185 conserved hypothetical proteinchromosome CDS1265442 915 - 0.535519
NA SSO_P158 conserved hypothetical proteinpSS_046 CDS139608 291 - 0.415808
NA SSO_2781 putative DNasechromosome CDS2932771 351 - 0.575499
NA SSO_0853 putative regulatorchromosome CDS904194 831 + 0.56077
acrB SSO_0449 acridine efflux pumpchromosome CDS473448 3150 - 0.538095
acrD SSO_2550 AcrDchromosome CDS2689662 3114 + 0.543674
ampC SSO_4336 beta-lactamase; penicillin resistancechromosome CDS4604316 1134 - 0.505291
ampD SSO_0118 regulates ampCchromosome CDS127961 552 + 0.539855
ampE SSO_0119 regulates ampCchromosome CDS128509 855 + 0.523977
bacA SSO_3194 possible phosphorylates undecaprenolchromosome CDS3357540 822 - 0.527981
creD SSO_4550 inner membrane proteinchromosome CDS4821791 1353 + 0.495196
dinF SSO_4224 DNA-damage-inducible protein Fchromosome CDS4482165 1380 + 0.553623
emrA SSO_2829 multidrug resistance secretion proteinchromosome CDS2972651 1173 + 0.531117
emrK SSO_2459 multidrug resistance protein Kchromosome CDS2595344 1164 - 0.419244
mdlA SSO_0436 ATP-binding component of a transport systemchromosome CDS461068 1773 + 0.539763
mdlB SSO_0437 putative ATP-binding component of a transport systemchromosome CDS462833 1782 + 0.558923
msbA SSO_0916 ATP-binding transport proteinchromosome CDS982328 1749 + 0.507719
sapB SSO_1847 peptide transport permease protein-like proteinchromosome CDS1944063 966 + 0.514493
sapC SSO_1848 peptide transport permease protein-like proteinchromosome CDS1945015 891 + 0.567901
sapF SSO_1850 putative ATP-binding protein of peptide transport systemchromosome CDS1946899 807 + 0.511772
yadG SSO_0135 putative ATP-binding component of a transport systemchromosome CDS151755 927 + 0.491909
yadH SSO_0136 conserved hypothetical proteinchromosome CDS152678 771 + 0.507134
yaiH SSO_0351 putative enzymechromosome CDS377935 1158 - 0.549223
yajD SSO_0387 conserved hypothetical proteinchromosome CDS415699 348 + 0.471264
ybhF SSO_0773 putative ATP-binding component of a transport systemchromosome CDS816115 1737 - 0.549223
ybhR SSO_0771 conserved hypothetical proteinchromosome CDS813872 1107 - 0.523939
ybhS SSO_0772 conserved hypothetical proteinchromosome CDS814989 1134 - 0.55291
ybjZ SSO_0866 putative ATP-binding component of a transport systemchromosome CDS919845 1947 + 0.538778
ycfV SSO_1137 putative ATP-binding component of a transport systemchromosome CDS1217944 687 + 0.556041
ydhE SSO_1493 putative transport proteinchromosome CDS1567147 1374 - 0.527656
yeeO SSO_2044 conserved hypothetical proteinchromosome CDS2143072 1641 + 0.484461
yegN SSO_2127 conserved hypothetical proteinchromosome CDS2227294 3123 + 0.563881
yegO SSO_2128 conserved hypothetical proteinchromosome CDS2230417 3078 + 0.565302
yhcQ SSO_3383 putative membrane proteinchromosome CDS3561325 933 - 0.534834
yhhJ SSO_3721 putative transporterchromosome CDS3897080 1128 - 0.547872
yhiH SSO_3722 putative ATP-binding component of a transport system, fragment 1chromosome CDS3898204 2685 - 0.565363
yhiV SSO_3572 putative transport system permease proteinchromosome CDS3741708 3114 - 0.529544
yibH SSO_3812 putative membrane proteinchromosome CDS4002727 1164 + 0.524055
yjcR SSO_4263 putative membrane proteinchromosome CDS4528510 1032 - 0.560078