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2024-05-05 10:44:42

Gene list

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COG category: Defense mechanisms
Organism: Shigella boydii Sb227, Sb227

Number of genes found: 43

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella boydii Sb227, Sb227
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SBO_4358 conserved hypothetical proteinchromosome CDS4409316 873 - 0.485682
NA SBO_4158 putative type I restriction enzyme R proteinchromosome CDS4206978 3414 + 0.509959
NA SBO_0800 putative regulatorchromosome CDS807718 831 + 0.56077
NA SBO_1491 putative membrane proteinchromosome CDS1468691 900 - 0.496667
NA SBO_0755 putative phage-related proteinchromosome CDS771438 864 + 0.321759
NA SBO_4159 putative type I restriction enzyme M proteinchromosome CDS4210455 1635 + 0.508869
NA SBO_1219 conserved hypothetical proteinchromosome CDS1215318 759 - 0.499341
NA SBO_4160 putative type I restriction-modification system specificity subunitchromosome CDS4212098 1071 + 0.353875
NA SBO_1879 conserved hypothetical proteinchromosome CDS1862421 915 + 0.52459
acrB SBO_0362 acridine efflux pumpchromosome CDS374565 3150 - 0.53619
acrF SBO_3260 integral transmembrane proteinchromosome CDS3263267 3105 + 0.513366
ampC SBO_4306 beta-lactamasechromosome CDS4355147 1134 + 0.505291
ampD SBO_0099 AmpDchromosome CDS107393 552 + 0.541667
ampE SBO_0100 AmpEchromosome CDS107941 855 + 0.520468
bacA SBO_2913 BacAchromosome CDS2917932 822 - 0.529197
creD SBO_4463 tolerance to colicin E2chromosome CDS4516349 1353 + 0.495935
dinF SBO_4073 DNA-damage-inducible protein Fchromosome CDS4114538 1380 - 0.554348
emrA SBO_2832 multidrug resistance secretion proteinchromosome CDS2839136 1173 - 0.529412
emrK SBO_2394 multidrug resistance protein Kchromosome CDS2384108 1164 - 0.418385
mdlA SBO_0342 ATP-binding component of a transport systemchromosome CDS357719 1662 + 0.534296
mdlB SBO_0344 putative ATP-binding component of a transport systemchromosome CDS360927 1782 + 0.558923
msbA SBO_2202 ATP-binding transport proteinchromosome CDS2182576 1749 + 0.50829
sapB SBO_1769 SapBchromosome CDS1746853 966 + 0.514493
sapC SBO_1770 SapCchromosome CDS1747805 891 + 0.566779
sapD SBO_1771 putative ATP-binding protein of peptide transport systemchromosome CDS1748695 993 + 0.511581
sapF SBO_1772 putative ATP-binding protein of peptide transport systemchromosome CDS1749689 807 + 0.513011
yadG SBO_0116 putative ATP-binding component of a transport systemchromosome CDS130978 927 + 0.491909
yadH SBO_0117 conserved hypothetical proteinchromosome CDS131901 771 + 0.511025
yaiH SBO_0271 putative enzymechromosome CDS284301 1158 - 0.550086
yajD SBO_0304 conserved hypothetical proteinchromosome CDS319576 348 + 0.468391
ybhF SBO_0682 putative ATP-binding component of a transport systemchromosome CDS694034 1737 - 0.548071
ybhR SBO_0680 conserved hypothetical proteinchromosome CDS691791 1107 - 0.524842
ybhS SBO_0681 conserved hypothetical proteinchromosome CDS692908 1134 - 0.550265
ybjZ SBO_0812 putative ATP-binding component of a transport systemchromosome CDS823151 1947 + 0.538264
ycfV SBO_1944 putative ATP-binding component of a transport systemchromosome CDS1917218 687 - 0.550218
ydhE SBO_1468 putative transport proteinchromosome CDS1444162 1374 - 0.529112
yegN SBO_0901 conserved hypothetical proteinchromosome CDS925632 3123 + 0.56324
yegO SBO_0902 conserved hypothetical proteinchromosome CDS928755 3078 + 0.561728
yhhJ SBO_3480 putative transporterchromosome CDS3469190 1128 - 0.546099
yhiH SBO_3481 putative ATP-binding component of a transport system, fragment 1chromosome CDS3470314 2685 - 0.565736
yhiV SBO_3513 putative transport system permease proteinchromosome CDS3505980 3114 + 0.529865
yibH SBO_3595 putative membrane proteinchromosome CDS3609392 1137 - 0.528584
yjcR SBO_4113 putative membrane proteinchromosome CDS4158892 1032 - 0.556202