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2024-05-11 22:16:28

Gene list

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COG category: Defense mechanisms
Organism: Escherichia coli W3110, K-12

Number of genes found: 44

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Escherichia coli W3110, K-12
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
aaeA p-hydroxybenzoic acid efflux system componentRecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA; Short=pHBA efflux pump protein A; chromosome CDS3388049 933 - 0.535906
acrB multidrug efflux system proteinRecName: Full=Multidrug efflux pump subunit AcrB; AltName: Full=AcrAB-TolC multidrug efflux pump subunit AcrB; AltName: Full=Acridine resistance protein B; chromosome CDS480478 3150 - 0.539683
acrD aminoglycoside/multidrug efflux systemRecName: Full=Probable aminoglycoside efflux pump; AltName: Full=Acriflavine resistance protein D; chromosome CDS2586251 3114 + 0.544637
acrF multidrug efflux system proteinRecName: Full=Multidrug export protein AcrF; AltName: Full=Acriflavine resistance protein F; AltName: Full=Protein EnvD; chromosome CDS3414888 3105 + 0.515298
ampC beta-lactamase/D-alanine carboxypeptidaseRecName: Full=Beta-lactamase; EC=3.5.2.6; AltName: Full=Cephalosporinase; Flags: Precursor; chromosome CDS4382491 1134 - 0.501764
ampD N-acetyl-anhydromuranmyl-L-alanine amidaseRecName: Full=1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD; EC=3.5.1.28; AltName: Full=N-acetylmuramoyl-L-alanine amidase; chromosome CDS118733 552 + 0.538043
ampE predicted inner membrane proteinRecName: Full=Protein AmpE; chromosome CDS119281 855 + 0.520468
ampH beta-lactamase/D-alanine carboxypeptidaseRecName: Full=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH; EC=3.4.-.-; AltName: Full=DD-alanine-endopeptidase; AltName: Full=DD-carboxypeptidase; AltName: Full=Penicillin-binding protein AmpH; Flags: Precursor; chromosome CDS394354 1158 - 0.553541
bacA undecaprenyl pyrophosphate phosphataseRecName: Full=Undecaprenyl-diphosphatase; EC=3.6.1.27; AltName: Full=Bacitracin resistance protein; AltName: Full=Undecaprenyl pyrophosphate phosphatase; chromosome CDS3201966 822 - 0.524331
creD inner membrane proteinRecName: Full=Inner membrane protein CreD; chromosome CDS4642858 1353 + 0.495935
dinF DNA-damage-inducible SOS response proteinRecName: Full=DNA-damage-inducible protein F; chromosome CDS4261332 1380 + 0.557246
emrA multidrug efflux systemRecName: Full=Multidrug export protein EmrA; chromosome CDS2810083 1173 + 0.533674
emrK EmrKY-TolC multidrug resistance efflux pump, membrane fusion protein componentRecName: Full=Probable multidrug resistance protein EmrK; chromosome CDS2487622 1164 - 0.419244
hsdM DNA methylase MRecName: Full=Type I restriction enzyme EcoKI M protein; Short=M.EcoKI; EC=2.1.1.72; chromosome CDS4586139 1590 - 0.548428
hsdR endonuclease RRecName: Full=Type I restriction enzyme EcoKI R protein; Short=R.EcoKI; EC=3.1.21.3; chromosome CDS4587929 3567 - 0.537146
hsdS specificity determinant for hsdM and hsdRRecName: Full=Type-1 restriction enzyme EcoKI specificity protein; Short=S.EcoKI; AltName: Full=Type I restriction enzyme EcoKI specificity protein; Short=S protein; chromosome CDS4584748 1395 - 0.404301
ldcA L,D-carboxypeptidase ARecName: Full=Murein tetrapeptide carboxypeptidase; EC=3.4.17.13; AltName: Full=LD-carboxypeptidase A; AltName: Full=Muramoyltetrapeptide carboxypeptidase; chromosome CDS1243743 915 - 0.530055
macB fused macrolide transporter subunits and ATP-binding component and membrane component of ABC superfamilyRecName: Full=Macrolide export ATP-binding/permease protein MacB; EC=3.6.3.-; chromosome CDS920769 1947 + 0.539291
mcrA 5-methylcytosine-specific restriction endonuclease BRecName: Full=5-methylcytosine-specific restriction enzyme A; EC=3.1.21.-; AltName: Full=EcoKMcrA; chromosome CDS1211923 834 + 0.383693
mcrC 5-methylcytosine-specific restriction enzyme McrBC, subunit McrCRecName: Full=Protein McrC; chromosome CDS4581592 1047 - 0.374403
mdlA fused predicted multidrug transporter subunits and ATP-binding components of ABC superfamilyRecName: Full=Multidrug resistance-like ATP-binding protein MdlA; EC=3.6.3.44; chromosome CDS468095 1773 + 0.540327
mdlB fused predicted multidrug transporter subunits and ATP binding components of ABC superfamilyRecName: Full=Multidrug resistance-like ATP-binding protein MdlB; EC=3.6.3.44; chromosome CDS469860 1782 + 0.562851
mdtB multidrug efflux system, subunit BRecName: Full=Multidrug resistance protein MdtB; AltName: Full=Multidrug transporter MdtB; chromosome CDS2157400 3123 + 0.566122
mdtC multidrug efflux system, subunit CRecName: Full=Multidrug resistance protein MdtC; AltName: Full=Multidrug transporter MdtC; chromosome CDS2160523 3078 + 0.562703
mdtF multidrug transporter, RpoS-dependentRecName: Full=Multidrug resistance protein MdtF; chromosome CDS3976888 3114 - 0.530186
mdtK multidrug efflux system transporterRecName: Full=Multidrug resistance protein MdtK; AltName: Full=Multidrug-efflux transporter; chromosome CDS1745171 1374 + 0.52984
mrr methylated adenine and cytosine restriction proteinRecName: Full=Mrr restriction system protein; AltName: Full=EcoKMrr; chromosome CDS4591629 915 + 0.506011
msbA fused lipid transporter subunits and membrane component and ATP-binding component of ABC superfamilyRecName: Full=Lipid A export ATP-binding/permease protein MsbA; EC=3.6.3.-; chromosome CDS967043 1749 + 0.508862
rbbA fused ribosome-associated ATPasesRecName: Full=Uncharacterized ABC transporter ATP-binding protein YhiH; chromosome CDS4010877 2736 + 0.567251
sapB predicted antimicrobial peptide transporter subunitRecName: Full=Peptide transport system permease protein SapB; chromosome CDS1356219 966 - 0.514493
sapC predicted antimicrobial peptide transporter subunitRecName: Full=Peptide transport system permease protein SapC; chromosome CDS1355342 891 - 0.569024
sapF predicted antimicrobial peptide transporter subunitRecName: Full=Peptide transport system ATP-binding protein SapF; chromosome CDS1353542 807 - 0.511772
yadG predicted transporter subunitRecName: Full=Uncharacterized ABC transporter ATP-binding protein YadG; chromosome CDS142779 927 + 0.496224
yadH predicted transporter subunitRecName: Full=Inner membrane transport permease YadH; chromosome CDS143702 771 + 0.507134
yajD conserved hypothetical proteinRecName: Full=Uncharacterized protein YajD; chromosome CDS429829 348 + 0.471264
ybhR predicted transporter subunitRecName: Full=Inner membrane transport permease YbhR; chromosome CDS825424 1107 - 0.523035
ybhS predicted transporter subunitRecName: Full=Inner membrane transport permease YbhS; chromosome CDS826541 1134 - 0.551146
ybjR predicted amidase and lipoproteinRecName: Full=N-acetylmuramoyl-L-alanine amidase AmiD; EC=3.5.1.28; Flags: Precursor; chromosome CDS905335 831 + 0.56077
yeeO predicted multidrug efflux systemRecName: Full=Uncharacterized transporter YeeO; chromosome CDS2060340 1644 - 0.482968
yhhJ predicted transporter subunitRecName: Full=Inner membrane transport permease YhhJ; chromosome CDS4013612 1125 + 0.546667
yiaV membrane fusion protein (MFP) component of efflux pump, signal anchorRecName: Full=Inner membrane protein YiaV; Flags: Precursor; chromosome CDS3886316 1137 + 0.506596
yibH hypothetical proteinRecName: Full=Inner membrane protein YibH; chromosome CDS3869036 1137 + 0.526825
yigF conserved inner membrane proteinRecName: Full=Uncharacterized protein YigF; chromosome CDS3633882 381 + 0.349081
yjcR predicted membrane fusion protein of efflux pumpRecName: Full=Multidrug resistance protein MdtN; chromosome CDS4306557 1032 - 0.559109