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# Rickettsia conorii str. Malish 7, Malish 7

>RC1353 unknown
MLAEQQTEWIEWIISNNLVNKGWHIDNDTKKNVYFQKPKSKTEQTRLNGK
RPDHILYESNNNKPIAIIEAKKQEWI
>RC0301 multidrug resistance ABC transporter ATP-binding protein
MPWAIENAAKAANIHEFIESLPEKYNTIVGERGVKLSGGQRQRIAIVRVI
LKNAPILVLDEATSSLDSHTEQEVQKSINTMLDIENVTIIAIAHRLSTIK
HMDRIIVMDKGKIVEDGTFKELWEYQVNGFV
>RC1243 similarity to beta-lactamase
MPVSVQAQEMTKNILFIEDFVDCWKRYGKTGSGNKLSQDRTVKLKDRKIG
WFIGWLQKNDRTVFFVHFIENNKNYDSYAGQRSKEAAKEKLKELINQELK
>RC1077 ABC transporter ATP-binding protein
MNNTILILKNISKHYSQGKTIVRVLDDLNLTVNEGELIAIIGSSGSGKST
LLHIAGLLDKPTKGQVIIPNSKYQKYHLIRLHYLGFIYQQHHLLKDFTAL
ENVIMPRLISGLDQKEAIEDATKILDDLGLGKKLYNMPGELSGGEKQRVA
IARSLINKPKIILADEPTGNLDPKTTNEVFNLFLKVAREQNTAIIMVTHN
YELAHKMDKLYKLKHRLLNIA
>RC0298 unknown
MKIKTYPVSFLWSVIKPYKYWYFVMMLGPIASGFHPIIYNYAVKLLLDLF
TQNEKIIFARSYKPIIWFVAAQAILDGAWRAHNFAQLKAMPHIFQGMMHK
ICNHCFNVPYTYFQNNLSGSIVGRYGAR
>RC0565 similarity to probable RND efflux transporter
MQIDRYKAAKLGILVEHVQNILYAAYGAEQISTLYTPTAQYDVILELDPK
YQTDSSMLSLVNINSTSGNLVTLTTLAKIVNTVGPLSISHFGQLPSVMVS
FNLQDGYSISDAVPKVNQAIRELQMLTTITGSFQDTVQACQPSFSDLGLL
LGLAVIVIYIILGMLYESFVHPITILLGLPTAILGALLALLIFNSELDMY
GFVGLIMLIGIVKKNAIMIIDFALELERTGNKSSACSNL
>RC0568 similarity to probable RND efflux transporter
MDYYAETIMAERLSMLPGVAQIQVYGSQQYAVRVQIDPVKMAVNNIGLDQ
VSNIISSANVNLPTGALYGTDIYSSIRAPGQLQNVKEYNELILTYKNGNP
LFLKNIGKTIDSVANNKIAAWYRDKPGVILAIQKQPDTTNTIEIVDSIKE
VLPLLRRQIPEGININIMF
>RC0873 similarity to type I restriction enzyme restriction subunit
MQDVIQDFDMITNGLNREEKAALKTRFSCSKMLAQTKEAIYAKAFDISTH
YLKTFKGTGLKGMLIAPSRLIAVRFKKFLDDIGQVSSEVVISATDDRDGY
KDIESENEVDKFIKNMREQYGVKFNNRIIKKFKSSDDPEILIVVSKLLTG
FDAPRNVVIYICKE
>RC0566 similarity to probable RND efflux transporter
MPYSYTGQILVFTDAAQTISFDAMVQEQQQVSDVLLKNPNIDSFFSAVGV
SGRNSAVNQGTILISLKPRDQRIGADAVIDQLRSKLNHLVGLRVYIQNVP
TITIDGPATKSQYQYTMQELDQDVLFSFAPKLKDKLARLPGFINVTSDLQ
IAQP
>RC0564 similarity to probable RND efflux transporter
MYFRPIMMTTLAALIRTMPIALGVGATRTERRSLGPAVVGGLLTHCNYLL
FIHHTDNLPIFRNS
>RC0569 similarity to probable RND efflux transporter
MPGADPTTMASSVALPLEKQCSTISDIDSMSSVNSNGTTQITLQFNLDRN
IDAAAQDIQATTERLTYPALIL
>RC0497 unknown
MSKSKAIENNGISNTNSPNGKYMAPRPEGVKPTCVVITYSVSKDIKAVRE
VLDERGASVHYIIDKDGTQKEYHNDLTDQAFYAGKSSWKGEVGVNKFGIG
VMLINDAKSDFPAEQIGKLKEFLKDVTERYPNLDLKHDLVGLGEVTVNRE
GNAHIAPGSKFPWKELAEAGFGRYFETTQEQKSKLLLSLDSTGEKVNTLQ
ENLKEYGYGVESTSTFDQFTQQAVRVFNDRYGTGLPNEEPPVSWTEAGQD
VLSQLLGQTVLEQTENA
>RC1350 similarity to type I restriction enzyme M subunit
MPFSQTITKKTSKNGKTITENHITSLFNNGIAKNNGDAACVLHCLQNLKE
GGRMALVVPEGFLFRKDTAAVRQFLLSKAKLQLVISLPQGTFLPYTGVKT
SILYFIDVHKPNNQKEYWFYEVKNIGVTSRQ
>RC0567 similarity to probable RND efflux transporter
MSLMALTLAMSFVVDDAIVVLENITRHMGKGESKIAGCINGTKEIGFTIV
SRTLSLMTIFITILFMSGILGKLLHELAIVITTSILLSGVISITVTPMLC
NVFLRDRHCEERSDEALSGQPTEIATAPLTPRNNDLPLTEKAFEYVKQKY
GSSLTTVVEHSKTTMLIFFS
>RC1348 similarity to type I restriction enzyme S subunit
MNSYQKIIEGAKQIIDNWHPYFEINKQWEIVKFGDIVINKLKSNILSLEH
KEYTTLIVGKKGKMININTAIKGDIPVIASGRVSPYSHNQYNFNGNIITI
SSSGAYAGYIWYHNSPMWTSDCNVIYSINEKLLLTKYLYYILKSQQNIIY
QKQVGSGQPHVYLKDLEDLQIPIPPLEEQQKMVTELDNNQSKIDNLKNYI
KQFENKLKTTLNSLWQ
>RC1244 similarity to beta-lactamase
MKIIKQEGNCESRYAPCSTFKIAISLMGYDDGFLIDETHPKLPVKEGYAD
YLEVWKQSQTPKDWMKNSCVWYSQIITKELGMEKFRDYVT
>RC0286 abcT3, multidrug resistance ABC transporter ATP-binding protein
MIKYPTLSKSTFSLSIYFLKFDKVKMTLLTVICILLGMIPAIDSILLQKI
IDLIESFSDKNANNLLSSMIYWAVFYALWWESINIAYRSYDYLYLKTMPI
IKGKILNELYNYTQYHSHKFFQDNLAGHISNRITETARSFEMIISIFGEK
ILRKLAIIVFALIALHSVHYVFATIFILWITVFLGLSVLFSDKINKYSLN
YARSQSFVAGSIVDAISNINAVRMFTAHKFERQHLETRVENAVADEQTMQ
FFMFKLRYALGTSCSIMIFIMIYYLSKLRSELSISIGDCVLVLTLCINVA
DDIWDLTQEIGDMFEQVGAFNQGLSLMAPHIITDIANATPLDIKEGVIEF
RNVTFNYHHNNKLFYNKSVLIPSKQKVGLVGFSGSGKTTFISLVTRLHDI
EEGMILIDNQNIKNVTQDSLRKAISLIPQEPVLFHRTILDNIRYGKKEAT
LEEVIEAAKAAHIHDVIDNLPDGYDTMCGERGNNLSGGQRQRIIIARAIL
KNAPILILDEATSSLDSETESLIQESMDYLMQNKTVIVIAHRLSTLLNMD
RILVFEKGSIIDDGNHAELLKNSKLYQKLWNSQVKGLIV
>RC0211 acrD, acriflavin resistance protein D
MLLSKICIKRPVFATVLNLVIVALGAIFFTKLQIRGTPDISVPIINVEAH
YAGADALYMEQEITTRIEKALKTVKNLDYITSQSSTGESSITLSFLLSTD
IEVALNDVRAKISDITYMFPQDMKTPSVTKLDADSFPSLFISIESDQYSD
LELTKIVEDNLQTPLDKLESVGQSQIYGGREYIMRIEPDSKKLYQHKISL
LEIESAIKEQNKDYPAGTIKTKSNNFIVTLAGSLSTPEEFGNIILKVQNG
GIIKLRDIAKISLTSPDEDIIFRYNGKSSIALGLIKESKANVIDLSHEVT
KALERIKESMPKGISMGIAYDAATPVKASIYAVFQTIFEALILVVLVTYL
FLASAKITLIPFVTIPVSLIGTFSIMYAFGFSINIFTLLAMILAIGLVVD
DAIVMLENIFRYNEMGHKPMEAAMLASKEIGFAIIAMTITLAAVFLPVGF
IEGFIGKLFIEFAWTLAFCILFSGFVALTLTPMMSSRMVTKHNTDLPKFL
VKFNDILQFIQNKYIYYLKLTFDNQKKFVIIIASSFIVLIISFKFTQKIF
VPQEDDGFLQVSLKGPEGSNLESSTKVVKEAEKILANYKDILGYLMVIGA
GGSDNVFGFIPLKNWGERSCSQETIKNMLNKQFSEIPGMSIYAMDPRSMV
SGNASSPIEFTIQTNLEYDDLDKISQQFIDIMKTNPIFLNVNRNLQSAMP
TISIEVNRDKAYLYGMDLANIGKTVQYLLAGQQIGHFRMSNDLYDVILQF
NQKDRKDISDFSKILIRAKNNNMLPLESIANITEKISVKSYSHYNNSKSV
TISSDLAPDRKIDDAINEINKIAAKLLDPSNTIIEYIGEIKQMREADSNM
LITFVFALIFIYLVLAAQFESFTDPLLILLAVPFSITGGVLALWLAGNSL
NMYSNIGLITLIGLITKNSIMIVEFANQLRAKGVKVQEAIIESSKLRLRP
ILMTTLAAVVGALPLVFADGASAAARNSIGFVIVGGLSIGTIFTIFVIPV
IYHTFKKD
>RC1358 ampD, ampD protein homolog
MIVIDKTSYRAVGFDKRIKFLVLHYTQCDFKQSLDFLTGEKLSSHYLINN
ENPEHIFQLVEERDRAWHAGVSYWQGHERINDTSIGIEIVNPAFEVNAKN
NDIVWLPYSERQINSVISLCKQIIARYDIKPTRVVGHSDIAPGRKQDPGP
LFPWKLLYDNDIGAWYDEQVFNDLLPQVDITDIAVIQQKFITYGYKLEVT
EILDSKMKDIIISFQMHFRPSNFSGDLDAETIAILDALILKYKSELI
>RC0327 emrA, multidrug resistance protein A
MVKLIMPSVLQQAIDKYKHHPFTKYVIIIALIIFIYLGYRIYVWANTQST
DNAYIDADISNVSAEVSGVLTKLFVTDNTKVNKGDLIGEIDDRDYKAKLA
ALEASIEACIKNIEIIEQKISIGQISLEQAAEKLKLNKISFDIVATDFMR
VQELNKAKFASSKTLDDSKNAYQKAKTDYKQAQLDLDISKQHLQLLELEK
AAEQEKLKELTENKKVILRSLQNTKLIAMVPGIFGNSSLEVGNYIVPGRA
LFSIVQDNTMYIQANFKETQIQKFKSGMKVKIEFDALPKKVIYGKIRNIA
PATGSKFSLIPPDHATGNFTKSVQRVPVLIDFESPNANLVPGMSAIVSIR
TDQST
>RC0549 mccF, microcin C7 self-immunity protein
MSTVSRKNKIKTGCRGQAPRHDIVGLPVQQYLSIIFMILKNISLLIILFF
SISTFSAGHSLKNISITVVAPATGADNKTLSDLKNINGLNLQISSKCFAK
GKLPFLASSDEVRFNCLRDALFDESDNIVWSLRGGYGSARIIPDLLKLSK
PNKEKFFIGYSDITALHLFLSQEWGWKTIHGSNIADLLKPEQDQGNFTKL
AEILKGKVKQVTIDNLVPLNDIAKSSDLVNGKLTGGNLTMVQTSIGTSWQ
IKTKGKILFLEDVNVVPFRLDRELLHLKQAGLLEDVKAIIFGSFGKDLDA
TMLVLRNFADSLDIPVFKTNRFGHEKINDPIIYNTNSKIIKSKEFKLVMG
V
>RC0705 mccF2, similar to microcin C7 self-immunity protein
MPRHGIQKTTYNTHFLTFLPDTVAGPRYDIIMKKIIFNKQRDFISIIAPA
SSCLDAQDKLKEAIKILALHGFKTLVDDKIFSGDALPFFAASKEERLRMF
KEAMENEQVKIIWAFRGGYGCSEFVEDCFNIEQKGDKVLIGYSDITVLHL
LLNNHYNIPTIHGSVLTSLLPPTNQDIMPIINVLKGEKSEIQLIPIKKIS
EENITGTITGGNLTVLTKLISTGLHIHSHSYASLCHSRRSGNPEKIILDP
RFHGDDNKILLLEDVNEKAYAVHRNLVQLKNTGIFECIKAIIFGDFTKGD
EFVEQAIKSFCLNHIQNIGTYKAAGIGHGEVNHPVIMNHEVIINSNVLSF
TSPFEIVENK
>RC0534 msbA1, multidrug resistance protein
MNNNNLNDNYTAADVIKRLIKDHVKPYANKIYFSIFCMVVAALCTAVIVH
AARPIIDKVFLTHDKEMLIIMPIVLTVTFVIKGISEYYQNYLIKFVGQRV
LNDLQIKMYEHLLFADISFIQNQSSGRLISRFTNDISLMRGAVSNLLVGC
AKHFLTVVCLIATMFHLEPLLSCVVFLVFPLAVYPVQRMGRKIRRIFAQS
QEELGHYTSRLDETFQSIKIIKSFVGEQIESNRASLIINNILEFYKKTSK
LDAMVSPIMEGLSGLAVGGMVWYGGNLVLEGKSTPGALFAFLASFAAAYR
PFKSLVSLNINLQEGIAAAKRVFSILDTEPLIKDHEDAKDVDLYNPQITF
EKLALRFESKIAIKYIDLRLEPHKIIAFVGRSGSAKTSLSNLLVRFYDPN
EGRILINNHDIKDIKLTSLRGQISLVTQDTHLFDTSVAENIAYGQENATR
EEIIRAAKYADAHEFIMHLPNGYDTQIGGQGTTLSGGQRQRLSIARAFLK
DAPILIWDEATSSLDQASEQKILESLKKLRQGKTTLIITHRLSSITDLDN
IIVMKNGEICEQGTHTQLLKNKDEYYRLYNKELRENG
>RC1073 msbA2, multidrug resistance protein
MDIKLLYRLAKYLRCYKKDLIIVMISLLSVSASLLLIGSVFRNLVDKGLS
KDHISSVDNSILYICLLIIILSIASFFRSYFINNVAEKAVNQIRKEAYSN
LINYEIEEFEELKIGDIISRLTNDIDQISTLIVNFLSFFIRNSVMLIGSI
TLMFFESFKLASIVIITIPILLIPLIKFGKHVKVLSKKALESKSLLASDI
NETFNNIRAIYAFNHQINKIADFDTKLQNYLIYCKTRLKIRALFFAISIA
VIFLAITLVVWIGASDIVKGHLSAGQIISFIYYAIIAGVSCGGIFELLSE
MHLPVTALERIITIIDKTPIAHNNYLELNNSDPISIEFKNVDFTYHSRPN
LRIINNMSLKINANKFLGIVGRSGAGKSTVIQLLLRFYRQENGTILINNQ
DITLLNPAEIRKLIAYVPQEASIFSGTIKSNIIFGNNEASDDEINEIIKI
TGIEEFAAKLHDGINAKIGERGVRLSGGQKQRIAIARALLRMPQILLLDE
AMSALDTMSEQKLLESIKKIMRGNIIISIAHRISSIESADYILVIDKGGV
VAEGSHNDLSKNSEIYRNICREQLTI
>RC0345 pbpE, penicillin-binding protein 4*
MISLWSVAVMMRRYLLLLLFFITNCIDCFADIQQRINEAEKEYISNRFLN
AVFMFADDYKPLLTGAKGIFALNGEQLKANEMMPIVSATKPFTAAGILKL
QEQALLNINDKIYKYLDPEMWGGKVPDWAYKISIHNLLTHSSGIAEYFSF
VKLDLNMPKKEIHKKILQFVSSKPLEISIGKKFKYSNTNFVILGMIIEKV
AKKDLANFFYDEFFKPLNMKSTSFASYSEAARIQKNVISSNYPVRYFLTP
NNSNKPIFTPVTADFLAVPCADGGIISTPVDLIRWYRALNEEKILSKKSY
KLMTTKYFLAQDIEGRKSYMGYGIFLTDLDSKRLMIHYTGKALGIQSEAG
YVLPDNLYFAILSNTMIKIPEEEKDKIDMKNPLNQLGIIYFRDAIIGAAI
KN