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2024-05-03 03:19:09

Gene list

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COG category: Defense mechanisms
Organism: Escherichia coli O157:H7 EDL933, EDL933

Number of genes found: 60

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Escherichia coli O157:H7 EDL933, EDL933
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Z5948 putative restriction modification enzyme R subunit (endonuclease)chromosome CDS5471136 2433 - 0.494451
NA Z1594 chromosome CDS1481944 738 - 0.302168
NA Z3144 chromosome CDS2804386 1140 - 0.486842
NA Z5894 chromosome CDS5390202 1104 - 0.384964
NA Z3143 chromosome CDS2804038 324 - 0.521605
NA Z3695 putative beta-lactamasechromosome CDS3341233 1293 + 0.520495
NA Z5337 chromosome CDS4867416 387 - 0.341085
NA Z5892 chromosome CDS5388810 885 - 0.493785
NA Z1800 unknown protein encoded by prophage CP-933Nchromosome CDS1647591 366 + 0.554645
NA Z1100 putative regulatorchromosome CDS1037685 831 + 0.56799
NA Z1155 chromosome CDS1086337 738 - 0.302168
NA Z1356 unknown protein encoded by cryptic prophage CP-933Mchromosome CDS1273463 285 + 0.575439
NA Z1552 chromosome CDS1447257 708 + 0.44774
NA Z5946 putative restriction modification enzyme S subunitchromosome CDS5467846 1755 - 0.417094
NA Z2508 putative efflux pumpchromosome CDS2230032 3084 - 0.51524
NA Z2507 chromosome CDS2230013 168 - 0.541667
NA Z1852 putative holin protein of prophage CP-933Cchromosome CDS1690182 390 + 0.551282
NA Z1955 orf, hypothetical proteinchromosome CDS1775100 915 - 0.525683
NA Z5900 chromosome CDS5406645 4935 + 0.519352
NA Z5947 putative restriction modification enzyme M subunit (methylase)chromosome CDS5469600 1482 - 0.503374
NA Z0634 putative cytoplasmic membrane export proteinchromosome CDS601519 2163 + 0.571429
NA Z6047 putative DNAse encoded by cryptic prophage CP-933Pchromosome CDS2308786 366 - 0.568306
NA Z2659 putative membrane proteinchromosome CDS2396142 900 + 0.501111
acrB Z0576 acridine efflux pumpchromosome CDS547322 3150 - 0.537778
acrD Z3727 sensitivity to acriflavine, integral membrane protein, possible efflux pumpchromosome CDS3373553 3114 + 0.541747
acrF_1 Z4626 N-terminal fragment of integral transmembrane protein involved with acridine resistancechromosome CDS4217210 1887 + 0.510864
acrF_2 Z4627 C-terminal fragment of integral transmembrane protein involved with acridine resistancechromosome CDS4219127 1233 + 0.512571
ampC Z5757 beta-lactamase; penicillin resistance proteinchromosome CDS5262076 1134 - 0.504409
ampD Z0120 regulates ampCchromosome CDS123223 552 + 0.539855
ampE Z0121 regulates ampCchromosome CDS123771 855 + 0.520468
bacA Z4410 bacitracin resistance; possibly phosphorylates undecaprenolchromosome CDS4010153 822 - 0.524331
creD Z6003 tolerance to colicin E2chromosome CDS5524971 1353 + 0.494457
dinF Z5643 DNA-damage-inducible protein Fchromosome CDS5140910 1380 + 0.551449
emrA Z3986 multidrug resistance secretion proteinchromosome CDS3602875 1173 + 0.533674
emrK Z3630 multidrug resistance protein Kchromosome CDS3280272 1164 - 0.417526
mdlA Z0557 ATP-binding component of a transport systemchromosome CDS534937 1773 + 0.539199
mdlB Z0559 putative ATP-binding component of a transport systemchromosome CDS536702 1782 + 0.560045
msbA Z1260 ATP-binding transport protein; multicopy suppressor of htrBchromosome CDS1185486 1749 + 0.50829
sapB Z2496 homolog of Salmonella peptide transport permease proteinchromosome CDS2223768 966 + 0.512422
sapC Z2498 homolog of Salmonella peptide transport permease proteinchromosome CDS2224720 891 + 0.572391
sapF Z2500 putative ATP-binding protein of peptide transport systemchromosome CDS2226604 807 + 0.51425
yadG Z0138 putative ATP-binding component of a transport systemchromosome CDS147152 927 + 0.492988
yadH Z0139 orf, hypothetical proteinchromosome CDS148075 771 + 0.509728
yaiH Z0472 putative enzymechromosome CDS454911 1158 - 0.551813
yajD Z0511 orf, hypothetical proteinchromosome CDS494862 348 + 0.471264
ybhF Z1014 putative ATP-binding component of a transport systemchromosome CDS951265 1752 - 0.557078
ybhR Z1012 orf, hypothetical proteinchromosome CDS949022 1107 - 0.523939
ybhS Z1013 orf, hypothetical proteinchromosome CDS950139 1134 - 0.552028
ybjZ Z1116 putative ATP-binding component of a transport systemchromosome CDS1053082 1947 + 0.53775
ycfV Z1758 putative ATP-binding component of a transport systemchromosome CDS1620855 687 + 0.556041
ydhE Z2690 putative transport proteinchromosome CDS2418364 1374 + 0.533479
yegN Z3244 orf, hypothetical proteinchromosome CDS2900915 3123 + 0.564521
yegO Z3245 orf, hypothetical proteinchromosome CDS2904038 3078 + 0.563678
yhcQ Z4600 putative membrane proteinchromosome CDS4190649 930 - 0.53871
yhhJ Z4884 putative transporterchromosome CDS4427378 1128 - 0.537234
yhiH Z4885 putative ATP-binding component of a transport system, fragment 1chromosome CDS4428502 2685 - 0.562756
yhiV Z4927 putative transport system permease proteinchromosome CDS4469776 3114 + 0.528902
yiaV Z5006 putative membrane proteinchromosome CDS4561525 1137 - 0.506596
yibH Z5021 putative membrane proteinchromosome CDS4580172 1137 - 0.526825
yjcR Z5682 putative membrane proteinchromosome CDS5185748 1032 - 0.552326