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2024-05-05 15:49:31

Gene list

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COG category: Defense mechanisms
Organism: Pseudomonas syringae pv. phaseolicola 1448A, 1448A; BAA-978

Number of genes found: 54

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pseudomonas syringae pv. phaseolicola 1448A, 1448A; BAA-978
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PSPPH_0794 ABC transporter, ATP-binding/permease proteinchromosome CDS938153 2109 + 0.601233
NA PSPPH_4360 membrane protein, putativechromosome CDS4982106 663 + 0.58371
NA PSPPH_0613 hypothetical proteinchromosome CDS725878 981 + 0.541284
NA PSPPH_4791 conserved hypothetical proteinchromosome CDS5435995 339 - 0.637168
NA PSPPH_2907 transporter, AcrB/AcrD/AcrF familychromosome CDS3374730 3144 + 0.609415
NA PSPPH_2232 undecaprenol kinase, putativechromosome CDS2592312 834 + 0.581535
NA PSPPH_3300 HlyD family secretion proteinchromosome CDS3823957 885 + 0.616949
NA PSPPH_4686 ATP/GTP-binding proteinchromosome CDS5320626 1404 + 0.44943
NA PSPPH_4516 permease, putativechromosome CDS5146896 1266 + 0.583728
NA PSPPH_3554 multidrug resistance proteinchromosome CDS4090155 1209 - 0.599669
NA PSPPH_1624 ABC transporter, permease proteinchromosome CDS1886029 789 + 0.574144
NA PSPPH_1065 conserved hypothetical proteinchromosome CDS1258024 345 - 0.536232
NA PSPPH_2895 ABC transporter, ATP-binding/permease proteinchromosome CDS3347096 1782 + 0.613917
NA PSPPH_0329 RND efflux transporter, hydrophobe/amphiphile efflux-1 (HAE1) familychromosome CDS373987 3102 + 0.599936
NA PSPPH_2881 ABC transporter, ATP-binding/permease proteinchromosome CDS3328007 1761 - 0.615559
NA PSPPH_1512 ABC transporter, permease protein, putativechromosome CDS1756219 2481 - 0.629182
NA PSPPH_3676 ABC transporter, ATP-binding/permease proteinchromosome CDS4224452 1827 - 0.603722
NA PSPPH_0753 ATPase involved in DNA repair, putativechromosome CDS879828 1539 - 0.383366
NA PSPPH_0104 type I restriction-modification system restriction subunitchromosome CDS116979 3018 - 0.574884
NA PSPPH_0078 multidrug resistance protein NorM, putativechromosome CDS83223 1380 + 0.622464
NA PSPPH_2896 ABC transporter, ATP-binding/permease proteinchromosome CDS3348874 1746 + 0.62142
NA PSPPH_0733 RND efflux transporter, hydrophobe/amphiphile efflux-1 (HAE1) familychromosome CDS856469 3090 - 0.596764
NA PSPPH_4515 ABC transporter, ATP-binding proteinchromosome CDS5146184 711 + 0.610408
NA PSPPH_1196 RND efflux transporter, AcrB/AcrD/AcrF familychromosome CDS1404178 3105 - 0.613849
NA PSPPH_1723 HlyD family secretion proteinchromosome CDS1995588 1158 + 0.611399
NA PSPPH_4052 beta-lactamasechromosome CDS4634178 1107 - 0.607949
NA PSPPH_2203 MATE efflux family proteinchromosome CDS2557518 1374 + 0.604804
NA PSPPH_4014 multidrug/solvent tranporterchromosome CDS4585772 3135 + 0.588517
NA PSPPH_1432 ABC transporter, ATP-binding/permease proteinchromosome CDS1670746 1833 - 0.58647
NA PSPPH_2420 beta-lactamasechromosome CDS2798690 1194 + 0.620603
NA PSPPH_3045 transporter, AcrB/AcrD/AcrF familychromosome CDS3536940 3039 + 0.599868
NA PSPPH_0107 type I restriction-modification system DNA methylasechromosome CDS123215 2406 - 0.5798
NA PSPPH_0254 N-acetylmuramoyl-L-alanine amidasechromosome CDS294160 780 - 0.582051
NA PSPPH_2717 hypothetical proteinchromosome CDS3144478 588 + 0.602041
NA PSPPH_1104 HlyD family secretion proteinchromosome CDS1299020 888 + 0.585586
NA PSPPH_0813 unnamed protein productchromosome CDS958236 2163 + 0.577439
NA PSPPH_3284 beta-lactamasechromosome CDS3806565 1158 + 0.57772
NA PSPPH_1623 ABC transporter, ATP-binding proteinchromosome CDS1885082 951 + 0.574133
NA PSPPH_1556 HNH endonucleasechromosome CDS1808067 375 - 0.610667
NA PSPPH_1790 ABC transporter, ATP-binding/permease proteinchromosome CDS2095695 1770 + 0.605085
NA PSPPH_1513 ABC transporter, ATP-binding proteinchromosome CDS1758699 669 - 0.627803
NA PSPPH_0106 type I restriction-modification system specificity subunitchromosome CDS121882 1347 - 0.454343
NA PSPPH_2379 multidrug efflux transporterchromosome CDS2758099 3147 + 0.599936
NA PSPPH_1798 muramoyltetrapeptide carboxypeptidase, putativechromosome CDS2103535 936 + 0.63141
ampD PSPPH_0843 N-acetyl-anhydromuramyl-L-alanine amidase AmpDchromosome CDS1007260 549 + 0.57377
ampE PSPPH_0844 inner membrane protein AmpEchromosome CDS1007824 837 + 0.620072
dinF PSPPH_4427 DNA-damage-inducible protein Fchromosome CDS5054060 1341 - 0.626398
estC PSPPH_1407 carboxylesterasechromosome CDS1631536 1149 + 0.610966
lolD PSPPH_1860 lipoprotein releasing system, ATP-binding protein LolDchromosome CDS2161789 684 + 0.611111
macB PSPPH_1935 macrolide efflux ABC transporter, ATP-binding/permease proteinchromosome CDS2280297 1971 - 0.6276
mdtB PSPPH_2641 multidrug RND efflux transporter, permease protein MdtBchromosome CDS3050113 3111 + 0.601093
mdtC PSPPH_2642 multidrug RND efflux transporter, permease protein MdtCchromosome CDS3053220 3108 + 0.587194
mexF PSPPH_2272 multidrug efflux RND transporter MexFchromosome CDS2634958 3192 - 0.595551
msbA PSPPH_0527 lipid A export ATP-binding/permease protein MsbAchromosome CDS618657 1875 + 0.5744