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2024-05-05 17:06:28

Gene list

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COG category: Defense mechanisms
Organism: Silicibacter pomeroyi DSS-3, DSS-3

Number of genes found: 49

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Silicibacter pomeroyi DSS-3, DSS-3
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SPO0028 ABC transporter, transmembrane ATP-binding proteinchromosome CDS27605 1833 + 0.618658
NA SPO1260 MATE efflux family proteinchromosome CDS1329564 1341 + 0.659955
NA SPO2967 N-acetylmuramoyl-L-alanine amidase, putativechromosome CDS3164377 675 - 0.691852
NA SPO0921 transporter, AcrB/AcrD/AcrF familychromosome CDS973916 3033 + 0.649192
NA SPO3771 undecaprenol kinase, putativechromosome CDS3983356 804 + 0.664179
NA SPO0957 ABC transporter, permease proteinchromosome CDS1008968 792 + 0.656566
NA SPO1495 ABC transporter, ATP-binding proteinchromosome CDS1569268 708 + 0.644068
NA SPO0574 ABC transporter, transmembrane ATP-binding protein, putativechromosome CDS583707 3099 + 0.636334
NA SPO3641 ABC transporter, permease proteinchromosome CDS3842881 762 - 0.599738
NA SPO3636 beta-lactamase, putativechromosome CDS3836662 1161 - 0.665805
NA SPO2754 conserved hypothetical proteinchromosome CDS2946591 471 - 0.692144
NA SPO2332 transporter, AcrB/AcrD/AcrF familychromosome CDS2468788 3780 + 0.653175
NA SPO1221 hypothetical proteinchromosome CDS1280672 1983 + 0.461926
NA SPO1496 ABC transporter, permease proteinchromosome CDS1569983 2364 + 0.678934
NA SPO1960 beta-lactamasechromosome CDS2091123 1236 - 0.650485
NA SPO1245 ABC transporter, permease proteinchromosome CDS1313798 933 - 0.652733
NA SPO1511 efflux ABC transporter, ATP-binding proteinchromosome CDS1587291 732 - 0.689891
NA SPO1641 beta-lactamasechromosome CDS1744264 1197 + 0.643275
NA SPO2123 HNH endonuclease family proteinchromosome CDS2256948 585 - 0.611966
NA SPO3438 conserved hypothetical proteinchromosome CDS3641837 333 + 0.636637
NA SPO1394 beta-lactamase, putativechromosome CDS1459532 2124 + 0.652542
NA SPO1510 efflux ABC transporter, permease proteinchromosome CDS1586503 792 - 0.647727
NA SPO0027 ABC transporter, transmembrane ATP-binding proteinchromosome CDS25770 1839 + 0.630234
NA SPO0810 6-aminohexanoate-dimer hydrolase, putativechromosome CDS843475 1164 - 0.635739
NA SPO2696 beta-lactamase, putativechromosome CDS2848417 1128 - 0.64539
NA SPO2486 conserved hypothetical proteinchromosome CDS2636180 903 + 0.702104
NA SPO3005 ABC transporter, ATP binding/permease proteinchromosome CDS3204929 1932 - 0.667184
NA SPO0109 membrane protein, putativechromosome CDS113139 1128 - 0.567376
NA SPO3847 ABC transporter, ATP-binding proteinchromosome CDS4062235 930 + 0.651613
NA SPO2182 permease, putativechromosome CDS2316917 2415 + 0.709731
NA SPO2181 ABC transporter, ATP-binding proteinchromosome CDS2316132 789 + 0.705957
NA SPO0110 ABC transporter, ATP binding/permease proteinchromosome CDS114268 2727 - 0.605794
NA SPO1525 transporter, AcrB/AcrD/AcrF familychromosome CDS1601623 3207 - 0.669161
NA SPO3815 ABC transporter, permease proteinchromosome CDS4029463 3120 + 0.649679
NA SPO1926 conserved hypothetical proteinchromosome CDS2047955 2898 - 0.572119
NA SPO3030 efflux ABC transporter, transmembrane ATP-binding proteinchromosome CDS3234424 1971 + 0.642821
NA SPOA0367 ABC transporter, permease proteinmegaplasmid CDS411009 1134 - 0.64903
NA SPO3121 MATE efflux family proteinchromosome CDS3329622 1395 - 0.678853
NA SPO1397 hydrophobe/amphiphile efflux-1 family proteinchromosome CDS1464160 3129 - 0.646532
NA SPO0293 transporter, AcrB/AcrD/AcrF familychromosome CDS304955 3402 + 0.664315
NA SPO0645 multidrug resistance efflux pump, putativechromosome CDS666206 1239 + 0.648103
NA SPO3642 ABC transporter, ATP-binding proteinchromosome CDS3843639 930 - 0.631183
NA SPO2592 beta-lactamase, putativechromosome CDS2747794 789 - 0.602028
dinF SPO2909 DNA-damage-inducible protein Fchromosome CDS3109324 1326 - 0.668929
hsdM SPO2733 type I restriction-modification system, M subunitchromosome CDS2920543 2703 + 0.63892
hsdR SPO2735 type I restriction-modification system, R subunitchromosome CDS2924539 3384 + 0.636525
hsdS SPO2734 type I restriction-modification system, S subunitchromosome CDS2923238 1305 + 0.56092
lolD SPO1124 lipoprotein releasing system ATP-binding proteinchromosome CDS1181305 687 + 0.700146
nosF SPOA0052 ABC transporter, ATP-binding protein NosFmegaplasmid CDS48248 894 + 0.689038