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2024-05-07 18:11:07

Gene list

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COG category: Defense mechanisms
Organism: Erwinia carotovora subsp. atroseptica SCRI1043, SCRI1043

Number of genes found: 47

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Erwinia carotovora subsp. atroseptica SCRI1043, SCRI1043
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA ECA0558 putative membrane proteinchromosome CDS625127 618 + 0.461165
NA ECA1514 putative permeasechromosome CDS1762389 1122 + 0.559715
NA ECA2665 putative N-acetylmuramoyl-L-alanine amidasechromosome CDS3001431 828 - 0.55314
NA ECA3268 putative toxin secretion ATP-binding proteinchromosome CDS3672395 2217 + 0.516013
NA ECA0422 putative membrane proteinchromosome CDS478617 1191 - 0.551637
NA ECA3475 conserved hypothetical proteinchromosome CDS3896702 351 + 0.501424
NA ECA2414 putative ABC transporter ATP-binding proteinchromosome CDS2726216 1719 + 0.522978
NA ECA0423 putative membrane proteinchromosome CDS479801 1119 - 0.571046
NA ECA0597 conserved hypothetical proteinchromosome CDS655150 1962 + 0.526504
NA ECA0947 putative membrane proteinchromosome CDS1060623 894 + 0.512304
NA ECA3324 ABC transporter integral membrane proteinchromosome CDS3735108 771 - 0.51751
NA ECA1097 putative type I secretion protein, ATP-binding proteinchromosome CDS1227176 2145 - 0.571562
NA ECA0585 restriction enzyme beta subunitchromosome CDS647419 987 + 0.379939
NA ECA1513 putative permeasechromosome CDS1761092 1290 + 0.566667
NA ECA0077 putative exported proteinchromosome CDS91666 1203 + 0.463009
NA ECA3325 ABC transporter ATP-binding proteinchromosome CDS3735875 939 - 0.518637
NA ECA0584 restriction enzyme alpha subunitchromosome CDS645558 1872 + 0.438568
NA ECA2929 putative efflux proteinchromosome CDS3271911 3090 - 0.560194
NA ECA0278 putative HlyD family secretion proteinchromosome CDS326310 966 + 0.549689
NA ECA0960 putative restriction enzymechromosome CDS1070915 2607 + 0.351745
NA ECA1515 ABC transporter ATP binding proteinchromosome CDS1763515 717 + 0.545328
NA ECA4127 putative permeasechromosome CDS4605050 1284 - 0.566199
NA ECA4448 conserved hypothetical proteinchromosome CDS4990460 897 + 0.304348
NA ECA0432 conserved hypothetical proteinchromosome CDS492953 792 - 0.554293
NA ECA2762 putative efflux proteinchromosome CDS3103135 1428 + 0.519608
acrB ECA1169 acriflavin resistance protein Bchromosome CDS1322899 3129 - 0.514222
acrD ECA4131 probable aminoglycoside efflux pumpchromosome CDS4609363 3123 - 0.569004
ampD ECA3795 anhydro-N-acetylmuramyl-tripeptide amidasechromosome CDS4242965 576 - 0.513889
ampE ECA3794 putative membrane-bound sensory transducerchromosome CDS4242114 855 - 0.550877
bacA ECA3589 bacitracin resistance proteinchromosome CDS4035704 819 - 0.501832
emrA ECA3512 multidrug resistance protein Achromosome CDS3932105 1176 + 0.539966
hsdM ECA3121 subunit M of type I restriction-modification systemchromosome CDS3486097 1473 - 0.514596
hsdR ECA3122 type I restriction enzyme EcoEI R proteinchromosome CDS3487642 2427 - 0.484137
hsdS ECA3120 subunit S of type I restriction-modification systemchromosome CDS3484442 1656 - 0.424517
lolD ECA1824 lipoprotein releasing system ATP-binding proteinchromosome CDS2071740 708 + 0.542373
macB ECA0887 macrolide-specific ABC-type efflux carrierchromosome CDS988067 1953 - 0.551459
mdlA ECA1158 multidrug resistance-like ATP-binding protein mdla; ATP-binding component of ABC transporterchromosome CDS1312639 1770 + 0.525989
mdlB ECA1159 ATP-binding component of ABC transporterchromosome CDS1314401 1776 + 0.524212
mdtB ECA3185 multidrug transporterchromosome CDS3560370 3123 + 0.572526
mdtC ECA3186 multidrug transporterchromosome CDS3563489 3081 + 0.571243
mexB ECA3447 multidrug resistance proteinchromosome CDS3866439 3144 - 0.50827
msbA ECA2557 lipid a export ATP-binding/permeasechromosome CDS2885457 1785 - 0.50028
norM ECA1922 multidrug resistance proteinchromosome CDS2179897 1374 - 0.534935
sapB ECA1976 peptide transport system permease proteinchromosome CDS2242767 966 - 0.552795
sapC ECA1975 peptide transport system permease proteinchromosome CDS2241890 891 - 0.579125
sapD ECA1974 peptide transport system ATP-binding proteinchromosome CDS2240881 993 - 0.550856
sapF ECA1973 peptide transport system ATP-binding proteinchromosome CDS2240066 816 - 0.5625