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# Parachlamydia sp. UWE25, UWE25

>pc1888 conserved hypothetical protein
MTEALVFLQNVSKIFDPSHPPALCSLSAKLMPGKMIGIAGPDGAGKTTLL
RLIAGLLLPSSGSITVAKYDTVLQAKHIHSLIGYMPQKFGLYEDLTVDQN
LALYADLKGLEKEERKEIFDKLLDFTGLKPFTKRLARALSGGMKQKLGLA
CTLLRKPQLLLLDEPNVGVDPISRRELWRMVQDLITNGITVLWSTAYLDE
AEKCDSVILLNEGQLLYHGSPYEFAERVRGRTFKLTHLQGNRREILTHIL
NQPFVKDGIIQGNDIRLVTENPNVELNPLSLPAGLSATVIPILPRFEDAF
VDILGGGPKGPSPLAVQIPQISSCQKEIIQARDLVKKFGSFTAADHINFT
VEEGEIFGLLGPNGAGKSTTFKMMCGLLKPTAGSAIVNGLNLQLAPGKVR
SQIGYMAQKFSLYGNLSVSQNLNFFSGIYNLRGKHRQKMIDQMIVIFGLQ
DYLNESAETLPLGLKQRLALSCSLMHYPKVLFLDEPTSGVDPITRREFWN
HINGLVKKGVTVMVTTHFMEEAEYCDRIGLIYRSRLIQVGTPENLKSIAK
TVQNPYPTLEDAFIHLIEEYEKENPT
>pc1900 unknown protein
MNSNDSNQSNNEPNKPFTPYDASQLSQNSNPDMTQKDKNFSQKERAEDKI
REQLRFARESKNNDEIFDFAKNNKEQMITYLLLGLGIVLMMFMYGSLLGE
LIIGMVVGYHFASEIVFYLQNVRHFFSNKEQLRSIVLTVVLVALFIAAPG
IFIGAAIIAAIQQFMPNKGGNRDE
>pc1216 hypothetical protein
MILLALKMLIGNKTSCLGVIFGIFLTTLLVSQQSAIFLGLLTRSYRMVTD
IPAPNIWVTDPATESDDRVRSMPEGYLDIVRSTPGVDWAVPISRSNVSLI
TPSRTFEVCKLYGIDDATLIGAPVEIIEGNVKDLRREGAVIVDVYAAHSS
LATITSEGKKRPLKISDEIEINNRRAVVVGICKITQGFYPQPILFSSYTQ
FKYFNPLIGDRIEFIVAKTNPNKSVEEVKQKINAHPNLNALTKEEFESKI
IESFLKTGILINFGLSVALGIIIGFSIAGQIFYSMTLENLMYYALIKAVG
GTKKMIFNMIIVQALLAGLIGFSLGIGATLLWGEAIQGTTLAFLFPWQLL
LFTAVIVLLICFLTTMLCIRKVSTADSKVLMGN
>pc1333 putative ABC transporter ATP-binding protein
MPQATLPKTFPAFFWFFLKKQWKWLLFAQIFSFAWSLDHTLWPYVIMTLI
DTITNFAGPQAEVWHALAKPIIMGISLWLGVEISFRLAGFIIAYIVPKIE
ADIRMSMFQYVMHHSHQYFSSHMAGSIANKIADLPQSLTRLLTLIVQLFL
PACLALMISTTMFAFINPFFALILISWVIIHMGICLAFSKKCDDYSNTHA
ESRTLLSGKIIDSLSNNANIRLFSRSQFEASYLSFFQEDELNKHWRSLFY
MEKMKIALGIACFLGACIALNWYMLYSWQQGELSAGEVVFIFNTTWNITI
MAWLAGLELPQVFKEIGICKQALTVIQDTHDIIDSPFAEQLTIHQGKIIF
DNVTFRYQKQQSLFQNMNITIEAGQKVGLVGFSGSGKTTFINLILRNYDI
ESGRILIDNQDISKVTQTSLREQISIIPQDPTLFHRSLIDNIRYARPDAT
DEEVIEASKQAHCHEFILKLPDKYQTLVGERGSKLSGGQRQRIAIARAIL
KNAPILILDEATSALDSVTERNIQEGLEFLMKDHTSLVIAHRLSTLSGMD
RILVFKEGKIIEDGTHEELIQADQHYANMWEMQVGGFLIDNYDELEDEES
EIDSSVY
>pc0839 unknown protein
MGSYMSLIQAISTCTHLICFPWKYQKNNSKKIAAWAAFFFIGWLYHPFKA
ANRYYEKLTDQGKTYFIGKKILLRNSIPEKLASFNNSHVQGQIYGIYITT
NETNLAATYQRLREAPQANEKQTIHIGCATWHNFDMICERKSSYGLIVDF
NPKNAAFINKTIDIINASNTRKVFKQSMIDYLNSLQEEEKKLFFHTDQQG
LPTDKIKQELSREGSWLQSEETYLFIRKLVSEGRLIAITEDITNFEKFAS
IRKFLDHNNIAIDTLYLSNICNFMHTDNDKYAFTKSIKSMLQDDTILINC
PKLRQLNTEYITILHQKTILGREVLASTFDNEELFEAVF
>pc1944 unknown protein
MYTGNLTSPFAVINTTSNSSIDEANQIQADIFGQKTKIEAIKNYALNFLG
HGYNRLAKNSGSKLLQRTLVKFPTDLVNVQSANSCDEYAIGATNEEASEK
IKNKYGGKFNLTCPIATIGTGVDYKNSKNAGERVDKIVFAACHIDYSKCT
LNKFPELRKKLLTVGCEVKGDSFVSSVWVYTGYKIFFEIDIQSQKEGSQK
NFQIEGGVEKGSVGLKAHADGLNKSLANREIKGITMHAKGFGGYSIPTNQ
FSLPQNGEEINQVIQTINNDYLAKVNQLMTRKCFINEKCLTSYNSVPIPC
FPKTYPKHLPVVETPHEPITVNFLKLAEQIDTYNSHKLKFELGTIQLNEL
FTSMATIFSDIEAKFRGCSSEDYTLVIGRSGAGKSTLIGYLQGAKIIYDK
IPITDSPENFSAIDKSEIEENLYVPKKLVAVYKTKQGTLYPEMGHDIAKT
KAFAVYENYIDTAGIFDTGGPANDICNAEAIRMATKVYSPRKMIVLINSA
SFEDRAYVFLEMIDRLKRVVRNPTDKSVMSSILFVVNDKLSKARHERKSK
KGVTKDILRAIRNLELERNRLLPQEQTWWNWFWGQKSKDQKLAIKERAND
PRIVGYQEKIKILKKLLKLDNIIVADIFAEDTRQKIKDWKDKKISLELSS
NPLSFTMENFVEGGHNKFKSTLRETTGYFLYLLSKIKQRNRKLNDFKIEI
AEIESQISSLNYSEKTDIETKISKKREAIESNTKIIADSKIELKEIKEKI
AEKELRKNKLQTDRRIFWKKMSPDKPINPRSFFAAGFLATKYIFSIDDKN
TPINHVELISGKRQEETTGSFCNEDRSKLNEGKYIVSYKPGWYGYQEDCK
AEVKLYVKTKDHPSSKTELIQIDQDLADLTARQIRLTTRISGFEGFNSVL
SVEIEQLKSQGELIESNKQQSIRNYSDKLNRLKHSQAAINCKLQPLKSIL
NAYKDFCQLIGKIIKNLKLDESENSSDRNIFNQFLDEYCRENGNEGNVET
LL
>pc1111 unknown protein
MSVKKSELLSSVYVTHSTEIESGESQTNHRKSKTIHELFHSDTLEIGENT
DSLKATEQVSYQCFFSKAMNIQSTHTPSDEDIRRAAPIHPIPEIDKPAFF
QEASLEGFVPKITSHSQISNLPSKDLLRNLAQMESKTIDQVMAIVLKAQL
ELERDQAEISQNSFDQLQNLRKIQERTLEEIKEALKKDEKLAGYLDTAQK
IAIAATFICGVAAMVITLSFSMPILTGAATALAIPAKMGAFFTGLLTAFS
AGGKGYINAKSNQTKGVLTSHKHDIELTKGWTDDYREKMGTIAETDAYFK
EMLIKLIKSLERMRRNVSAT
>pc0981 hypothetical protein
MMIGDYMMSSPLSPLNLNKLTAYPQGSMGELWQISFPLMLSLMSVSLMLF
LDRLFLANYSLEALNASANAGILVQFLQFWCISTVSVAEIFVGRYNGSKK
FEKLGQPVWQMIWLSLASFFWFIPLALWAGPYFFDGHPSALLEIEYFKYL
LCFGPLAALSGAISAFYIGQGQVKCVTCVMAVSNLVNIGLDYLLIFGWEP
WIPALGIKGAAIATGIALTVQVVIFGWDFFKASNRKEKGTNKWRINKRLF
RKSLSIGIPNAFAHTLELMAWVLIFHLMTKLGTDYITVVTVAQSIFFLFT
FMTEGVSKGATAIAANFFGAEQHELVWKLLKSGLKLYLFVFLLLGVILVW
YPDPLIHLFLVQKEALSPAVLSTLHAACFWVWLFFLFDGINWLLVGLLTA
AGDTRFIMKVGGTGPWIVALLPIYFFVFKWGAPANIAWMLIALYGVVSSL
IYLWRFKTEKWKYAFVT
>pc1693 unknown protein
MKFFRFKNLGWGILAFAPIGLISYFLILEDELDSRNLTSHARYKFKWEIT
AIPKELAKIDKILEQPFSYLGEGGQSYVFSSEDQKYVLKFFKFKRFKPSY
LVKKLPNSYPFKNYRDKHIAKKKQKLMRVLKGHKLAYDLLKRESGLIFIQ
LNPSNLSKWITLVDKGNQKRKVNLETVSYILQEKGEMLSQDLTYLLNQGN
LSIAKQRVDQVLGLYLSEYQKGIYDLDYGIMHNIGCRENKVFHLDVGKLI
VDERMKQPEFYQKNIVKVASKLQEWFSSKYPQYSRELIDHLEKKLSVILD
RKFTFSQSAGSVE
>pc1886 conserved hypothetical protein
MIDRIIALIIKELLAVWRDKKSRFILIVPPLIQLFVFALAGTLEVKNVPI
GILNLDRGPSSFELLQRFHDSRTFTPIYYLKSIHEIKELLDKQEVMLVIH
LDEQFSRNLKKQQATDVQLILDGRKSNTAQIVQGYVARVIDQFNHDYAQQ
AGFSNSSSELIMRHWFNPNLLYEWFNVPNLMGILTMLVGLIVTALSVARE
RELGTFDQLLVSPLQPMEILLGKTIPALLIGIIEGTIILLAAVFIFQIPF
TGSVAILYLSLFIFISAVVGVGLFISSLCMTQQQAILGTFVFMSPSVMLS
GFATPIENMPSWLQTVTLLNPLRYFLVIVKGVFLKNMPLNIVFQNLWPMF
LMAIFTLACAKWLFKRRLT
>pc1915 conserved hypothetical protein
MNISNFGFNPSQFANITSPSYSPPQDINDHLENENTSLDKPLLNLEETTS
TIQSSALSPSSEEIQLSFQEGTSLTISHSLLTFLREKSPYFKNLWSGHFQ
ETLQHPLDLTKKDFTLLLNCLMDANFKVPLEEITSAIQLADYYELTEVVT
NLEEQLIEGHKSQRFESFNSTEESLVGLKGILNFAQQCQLNALKNYLELT
TVSALLNQTSQLTEFEKILNHFSNEIERVNFSENAHLTDAHLLVLKNCKN
LKVLYLQGCRNLTDAGLAHLTPLTGLQHLNLSWCRNLTDAGLAHLAPLTA
LQYLDLSHCRNLTDTGLAHLTPLTALQHLDLRVCKNITDAGLAHLAPLTA
LQNLDLSDCGHLTDAGLAYLTPLTALQHLNLYFCFNLTDAGLVHLRPLTA
LQTLGLSQCWNLTDTGLAHLTPLTALQHLNLSRCYKLTDAGLAHLTPLTA
LQHLNLSYCENLTDDGLAHLAPLTALQYLRLSQCWKLTDAGLAHLTPLTA
LQHLNLSRCYKLTDAGLARLTPLTALQHLDLKYCINLTDAGLARLTPLSG
LQHLALTNCKYLTDAGLAHLTLLTALQYLALANCKNLTDVGLAHLTPLTA
LQHLDLSECRHLTDAGLAHLTPLTGLQHLNLSWCRNLTDAGLAHLSPLSV
LQHLALSQCSRLTDDGLDRFKTLATSLNLEIVR
>pc1887 conserved hypothetical protein
MNINSFIRLKALIIKEFFQIVRDPSSLSISLILPLILLFLYGYGVSLDAN
HIKIGLILEDTSPDAQSFAQTLKDSRFFEVTVAHDRHILNTLMVAGSIKG
IVIVPSYFTSFKMRSYHKAPIQVLTDGSEPNTASFVQNYIQGAWQNWLIQ
ESTIQSNQKIPFVRPLPRFWFNEELESRNFLIPGSLAIIMTLIGTLLTAL
VVAREWERGTMEALMSTSVTITELLIGKLVPYFILGMFAMTVCVCIAVFF
YHIPLRGSWLLLGFVTAIFLWTALGLGLLISTLTKNQFTAAQAAIVASYL
PAFILSGFIFEISSMPTPIRWITYLIPARYFVSSLQTIFLVGNIWKLIIP
NTGVMLLIGCVIYLLTAKKTVKRLD
>pc0896 hypothetical protein
MFNTSSSTPKTLKQFWILLTNRWAFGCFALLTFQQLIEASSTIWLVIIVK
KITAGEAFFSYLFIYLTSLVFPYIPGCMASIIKISWRQEAQRSFINAFVS
SNRNQIGEWNNKGIREEKLSILTAEAPNALQTLIDYVYDLYAYVISVFFN
IFALSIVVEPLFGLAYAISVLTVLVVMKAKRRLQRRLTKKALTARIDLYQ
SLLAAWDNVLLGNRYNFKLWEDRTTQRLNRCLQKNVDLERFDQVLAIVIS
LLTCIPSLIVVVYHVYTNRHSVANLTAFLVTLPILFNILSYTYQTLSLIF
RWTMHRSKLLSIYKTIQPATDAQQMMEKKIKWSKIQLDASNLPKTDHVSL
SVPPTLSSHLDLLTFTQQSGRITLRGENGAGKSTVLMLVKNALCDRAFFL
PTQNQLSFISETNKYSTGESLRSRLLEIIDKVDVDVLLLDEWDANLDKDN
RESLSALIDELAEKKCVIEVCHR
>pc0113 hypothetical protein
MTAIERRALYNLLRMNWLNNPQMKVDHWQVDDYRIFSTETLFERLKKLNI
NLDKSSFIAYADECESPEDLTEQLVGDRELKAQNEDQVYLLIFELWRRLL
SEKPSLSIICNELDQLIYQYDQGKVENSTLLQDQLNQFITLLDENADQGI
PPQEVFTGVSTYCANDIETFLYDFISERIEEENEAYALDLLDDFSTYLGT
NKWFDLLRARLSSLSNRKIATKQLSQLLEDYLDKQDLEFNLELLSFMTEI
GDPYTFKEVLQSTLPLLQTEEDFQDFLFICADYCHRLDQENKEKSIHILI
HQRSNKELLHPFNSNDPALKILLQIFE
>pc0551 acrB, probable multidrug-efflux transport protein, acrB
MISHFFIDRPIFAFVLSIIITLAGLFALRMLPIEQYPNITPPQIQVTASY
AGADASTVAASVAAPIEQLVNGVEDMIYMYSQNSSNGDIALSIFFEIGSN
IDMAQVNVQNRVNMALPQLPEEVQRTGVQIKKQTPNILQLVAIQSPDQRY
DNIFVSNYTTINVVDEILRLPGISNAMIVNARDYSMRIWLRPDRLAQLQL
TTHDVIKAVQAQNNNFTAGLLGYPPTNSSTQLTVPLTGQGRLDNPKQFEN
IILRANNDGSYVQIKDVGRVELGAATYDVDGSLNGKTTSMIAIYPLFGAN
ALEVAGEVRKTMERLSKNFPEGLEYTIPYDTTDFITASIHEVTKTIFEAA
ILVSLVVLIFLQNLRATLIPIIAMIVSIVGTFAGMYVLGFSLNTLTLFGM
VLAIGIVVDDAIVVIENVERNMRELKLLPRAAAHKAMEEVSGPVVAIVFV
LCAVFIPVAFLGGIAGQLYKQFAITISVSVVISGFVALTLSPALAALILK
PHTSPSRFSLLFNKGFDAFTNGYMHITKWILNHAWAGLLLFTSVITILVI
LNHVIPTSFIPQEDQGYLMALVNMPDASSLDRTKEVDTAITEIALDIPGV
ENMVSLTGFSLLESLNRLQMGTNFITLKNWDQRRTPVLQAGAIQAALNKK
YSTISDAQIMTFNPPAIQGLGTVGGFEFWIENRGDGDIQALETVTQNFIA
KARGRPELQGLTTSIQTNNMQLYVDLDRYKAETLGVTISEVFQTLQIFLG
SLYINNFNKFGRVFQVNVQAEPTYRSNLQNLEDMYVRSIHNEMVPLKSFL
STHYTKGANLVSRFNGFTSAKIIGGAAPGYSSGQAMAAMEQLAKEELPEQ
MTYAWSGEAYQEKKTGGTSTNVLLIGVLMVFLILSALYERWSLPFAIILA
VPFGLMGAFLAIWIRGISNDVYFNVGLVTLIALSAKNAILIVEFAIIKRE
EGLSVLEAAMEAAKLRFRAILMTSLTFILGVFPLVISSGAGAASRHSVGT
GVFGGMIAATILAVFLVPLLYKLIDQRIEKKEKREHV
>pc0633 acrD, putative acriflavin resistance protein D
MNLPDLSVKRPVFISMIMLALVVFGTIAFKELGVDLFPKIDFPVITVIST
LPGADPETMEKSVTEIIEEAVSNISSIKHLRSTSAEGISQIIVEFDLDKN
VNIAYQEVQAKIGTVRQELPNDLKDIIIEKFDIDSAPIMAVVLSGDQPIE
ELSKIANKTIKDSLQQVPGVGQIKIVGKQDRNIWIYLDPYKLEGMHLSVQ
DVIQAIKNQHLEFPGGRIETGKIELPVKIKAEFDQSQNLSSIVVAYQNGY
PIKISDIGTIVDGLEEQRTLARLNEKQAIALVIRRQSGTNTVNVAHAVKK
ELERLKPELAAQGIHTEIAQDLSVFIEHSIEEIEFHLLFGGALAILIVFL
FLRNFRITLISALAIPISVMATFMLLNWMNFTLNTMTMLALSLSIGILID
DAIVVVENIFRHFKQGKNAEEAAKIGTREIALAAFAITMSIVAVFLPVAF
MKGMIGRFFYQFGLTVTFAVLLSLFVAFSLTPMLAAKFLKPSKSNHFLSK
WIGKALYCLDQIYESLLIKALKFYKTSLFIAFFLLGMTIYLSQYIRSEFV
PLEDQSEFFINVRTPLGSSLSVTDQALKNIRAQIQDNDWFKYSFSTIGND
SFNKVNEGGIYVKMTDKGTRTISQMDAMKWVREKLTNLENMKISVEPVEA
ISGGGARNAAIQLDIKGHNLGKIDEIAQNLIAILQGYEGYVDLDTSYEKG
KPEIEIHIKRDQAFALGVAPSTIAQSVKPLIGGSDISKFRADGERCNITV
RLKEAFRNKTKDLLNLSVRNDQGQLMKLNHFIDVQEKQGPVQIDRYNRFR
IVSVYSNLQSEKKVLGEAINEIQSAIQSMNLPAGYSVQLSGHAESMNESF
ENLLFALFLALVVVYMVLASQFESFIQPLIIMLSVPFSMIGALGILVITQ
STLSIFTIIGIIMLMGMVTKNAILLIDYINLLRSKDGLDIRTAILRAAPT
RLHPIMMTTLAMVFGMLPIALSNGPGSESRAPMALAIIGGLVSSMFLTLI
IVPVMYYMLDNGINFFTNLFKRKKQ
>pc0471 bacA, putative bacitracin resistance protein (probable undecaprenol kinase)
MTIWEAFFLGLIQGVTEFLPISSSGHLELAQYFLGFEKLQSYVLFNLICH
LGTLGSILYMFLPQIKQSLITERNHIFHIILGTLPLFPLVLILKPIKATF
DQPQYLGLCFLFSAALLFSGVYFRLQMQKKHSLRDCLTIGLFQAVAVLPG
ISRSGATISAARLLGWDKQDAIQFSFLLAIPAILGGTFLEIWQFLKLPAS
EIPPIEIGQFLTGFITSFMIGCASLWAVIQMMTQDKWVYFAWYCLFIGIA
TTLYFQM
>pc0128 emrA, probable multidrug resistance protein, emrA
MTEKEPTTTNQDFSSLNLDLLNKKKRNKVLLKIFFVFLLLTILTTIYWYL
FIRFHESTDDAYVNGNIVNLMSPEQGTITAIYADNTDFVKQGQLLIELDP
TLYQLAFEQAQVELALAVREVQQLYETVQQKKAALELKQADLKRAQEDFE
SRNSLRNTEAISIEDLNHAQANLTVAQAATNLSKHELNSAIAAIGSTSLE
NHPNIQNKEIALKQTYVNLKRCKILAPVSGFISQRKIQVGEWVSTTRSLL
SIIPLDQIWIDANFKETELRDIRIGQPVTVKSDMYGSSVLYHGKVLGVLA
GTGSVFSLIPPQNATGNWIKIVQRVPVRISLDSNELRQFPLFLGLSTYVV
VDTKNQLGDRLASNPVYNPILTTSVYEIPMQPAQELIDSIIQANLNHKS
>pc1217 glnQ, putative ABC transporter, ATP-binding protein
MKEIAVKCRGITKSYGTKENRVDALKGINLDIHQSELTLLVGPSGSGKTT
LLSIISTILTPDEGELYLFEHEIHRMSEKEKALFRRDQLGIVFQSLLLIP
TLTVLENVSLPLLVAGHTQEAAERKARQFLEYLKMAHRSHVSPASLSKGQ
QQRVAIARAMTNESKIIVCDEPTSALDQTSGIEAMNLLKELSSNHSKAIL
VVTHDHRIFSFADRVVEMSDGQILSSGKI
>pc0815 lolD, probable lipoprotein releasing system ATP-binding protein
MHSHSTLILEAHDIQKNFYHPVQVKILQSVSLQVQMGESVAIIGRSGEGK
STLLQILGTLEQPCSGTLTIDNQLISSSNKSQIRNELIGFVFQSFHLLED
YTALENVLMPARIGRKSVAKGSLTEQRGMELLHQVGLQERAHFHTKLLSG
GEKQRIALARAMCNDPKIIFADEPSGNLDRQTAHLMHEILLKFIHGQQKA
LVLVTHDPELAKLCSSQYELINGCLYRR
>pc1163 msbA, putative transport ATP binding protein
MRLLMKTALMGKQHRFLIILTILSMIFLTIASQLEVIALGVITRKGPDFF
ELFAPVKDGKLQRQTEVSWKQMQDRWVEIEGPEQDTITLQDTIHFLNQHT
GTNQNLVEKVIKSLDYFIPVSSSLKALAFFIIIVALFKAISLFSQRFTAR
LVAIQVSRDLRQAYFEHIQSLPMTFYQKHHIGSLSSRVVGDASLVAEALN
ACLVNYLQTPFTVFTTLTLCFYTSWQLSLIIFFGFPLIVFPIIFLAKKVK
KISKQIQKNQEIFSSVLIDFLAGIQTVKVFAMEEFSLKKYREQNGKMAAL
EQKSARYDLSSRPIVHTIGMFFLATALLYGLYILQLNVSDVLVYCGLLYV
FYEPIKKFAEENTHIQKGIAAAERMQEVLHVQPQIKNQDGALELNHVEET
IEFDQVWFRYDSKWVLRGVSFTIQKGQTVALVGPTGSGKSTIAQLLPRLY
DIEKGEIRIDGHSLTAYTQKSLREQMAFVPQKPFLFLDTVAENISFGRPF
SPLDIQEAAKLAHADEFIQQLSEGYQTELSEAGKNLSGGQQQRLAIARAL
VKKAPILIMDEATSALDALSEAHIKSALNQQRGKITQIIIAHRLSTIEDA
DKIIYLENGEKIAEGTKDELLHCCPSFRKMWDVMYTQRSEKSVQTH