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2024-05-06 23:01:58

Gene list

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COG category: Defense mechanisms
Organism: Rhodopseudomonas palustris CGA009, CGA009

Number of genes found: 67

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Rhodopseudomonas palustris CGA009, CGA009
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA RPA4087 ABC-2 type transport system permease and double ATP-binding protein fusionchromosome CDS4626573 2796 - 0.636981
NA RPA4774 conserved unknown proteinchromosome CDS5389767 642 + 0.668224
NA RPA1021 putative transporter, AcrB/D/F family; Cation efflux system proteinchromosome CDS1121232 3225 + 0.655814
NA RPA0460 putative esterasechromosome CDS506145 1188 - 0.637205
NA RPA1650 putative ABC transporter, ATP-binding proteinchromosome CDS1833998 681 + 0.653451
NA RPA3788 putative ABC transporter, ATP-binding proteinchromosome CDS4286411 1173 - 0.642796
NA RPA1300 possible restriction system proteinchromosome CDS1419941 954 + 0.598532
NA RPA2926 ATP-binding protein of ABC transporter, possibly involved in lipoprotein releasechromosome CDS3310911 699 - 0.666667
NA RPA2567 possible EA31 gene protein, phage lambdachromosome CDS2913943 840 + 0.538095
NA RPA4095 putative multidrug-efflux transport protein mexFchromosome CDS4635409 3153 - 0.633999
NA RPA4414 putative RND efflux transporterchromosome CDS4970295 3138 - 0.659975
NA RPA4432 NHL repeatchromosome CDS5000844 1635 + 0.656881
NA RPA0515 possible efflux pump protein FarAchromosome CDS574938 1170 - 0.667521
NA RPA3789 putative ATP-binding component of a transport systemchromosome CDS4287580 954 - 0.667715
NA RPA1951 possible FusE-MFP/HlyD family membrane fusion proteinchromosome CDS2194774 891 - 0.673401
NA RPA3509 permease, ABC-2-type transport systemchromosome CDS3962336 762 + 0.616798
NA RPA4810 predicted permeasechromosome CDS5430828 2466 + 0.689376
NA RPA4680 putative efflux transporterchromosome CDS5278164 3153 + 0.664447
NA RPA0096 putative multidrug-efflux transport proteinchromosome CDS107415 3150 + 0.662857
NA RPA3539 Putative peptidoglycan binding domain 1:N-acetylmuramoyl-L-alanine amidase, family 2chromosome CDS4003820 786 + 0.681934
NA RPA3508 ATP-binding component of ABC transporterchromosome CDS3961413 921 + 0.65038
NA RPA2574 possible RND efflux transporterchromosome CDS2922833 3132 + 0.663155
NA RPA3775 putative RND efflux transporterchromosome CDS4269405 3105 - 0.64219
NA RPA0574 possible ABC transporterchromosome CDS636449 831 + 0.618532
NA RPA2809 Beta-lactamasechromosome CDS3183212 1293 - 0.647332
NA RPA3543 possible multidrug resistance efflux pumpchromosome CDS4007765 1269 - 0.694247
NA RPA1878 putative 6-aminohexanoate-dimer hydrolasechromosome CDS2108394 1176 - 0.64881
NA RPA0683 possible ABC transporter permease componentchromosome CDS759598 1134 + 0.603175
NA RPA4809 putative ABC transporter, ATP-binding proteinchromosome CDS5430178 654 + 0.668196
NA RPA3483 RND efflux transporterchromosome CDS3930242 3138 + 0.659656
NA RPA2575 possible RND efflux transporterchromosome CDS2925964 3108 + 0.667954
NA RPA0556 HNH endonuclease:HNH nucleasechromosome CDS617758 558 - 0.616487
NA RPA3991 putative ABC transporter ATP-binding proteinchromosome CDS4513285 1803 + 0.663339
NA RPA0919 ABC transporter, ATP-binding proteinchromosome CDS1020753 1905 + 0.684514
NA RPA1608 Beta-lactamasechromosome CDS1787022 1281 + 0.626073
NA RPA2287 hypothetical proteinchromosome CDS2590350 987 + 0.492401
NA RPA2800 unknown proteinchromosome CDS3175202 810 - 0.644444
NA RPA0682 possible ABC transporter ATP-binding component, membrane boundchromosome CDS756887 2715 + 0.635359
NA RPA1325 putative FusE-MFP/HlyD family membrane fusion proteinchromosome CDS1444051 942 + 0.679406
NA RPA0573 putative ABC transporter (ATP-binding protein)chromosome CDS635655 798 + 0.650376
NA RPA1961 RND efflux transporterchromosome CDS2205714 3051 + 0.648968
NA RPA3265 putative ABC transporterchromosome CDS3674048 2139 - 0.659654
NA RPA2148 Beta-lactamasechromosome CDS2416916 1269 - 0.640662
NA RPA2709 possible FusE-MFP/HlyD family membrane fusion proteinchromosome CDS3081860 903 + 0.616833
NA RPA1968 RND efflux transporterchromosome CDS2215077 3156 + 0.666667
NA RPA3284 possible penicillin binding proteinchromosome CDS3703437 1224 + 0.665033
NA RPA4086 probable permease of ABC transporterchromosome CDS4625458 1113 - 0.5885
NA RPA4763 possible cation efflux pumpchromosome CDS5375567 1437 - 0.693807
NA RPA1345 conserved hypothetical proteinchromosome CDS1490469 750 + 0.626667
NA RPA2657 putative beta (1-6) glucans synthasechromosome CDS3022547 1635 + 0.649541
NA RPA1391 possible ABC transporter ATP-binding proteinchromosome CDS1536850 1044 + 0.646552
bacA RPA0044 bacitracin resistance proteinchromosome CDS50260 807 + 0.612144
czcA2 RPA2056 RND divalent metal cation efflux transporter CzcAchromosome CDS2315398 3216 + 0.649565
emrA RPA3697 putative multidrug resistance proteinchromosome CDS4171914 1179 + 0.673452
matE1 RPA0800 putative cation efflux pump, DNA-damage-inducible proteinchromosome CDS886913 1323 - 0.66969
matE2 RPA0949 putative multidrug efflux protein (NorM)chromosome CDS1049187 1425 - 0.690526
matE3 RPA1691 probable cation efflux pump (multidrug resistance protein)chromosome CDS1886876 1374 - 0.681223
mexB RPA2372 RND multidrug efflux transporter MexBchromosome CDS2686138 3168 + 0.648359
mexD2 RPA1498 RND multidrug efflux transporter MexDchromosome CDS1661612 3168 + 0.64678
mexD2 RPA2736 RND multidrug efflux transporter MexDchromosome CDS3105483 3132 + 0.654215
mexD3 RPA3903 RND multidrug efflux transporter MexDchromosome CDS4404420 3153 - 0.645734
mexF RPA2956 putative RND multidrug efflux transporter MexFchromosome CDS3341940 3141 + 0.658707
ndvA RPA4265 putative beta-1,2-glucan ABC export system ATP-binding protein ndvAchromosome CDS4811238 1800 + 0.654444
nosF RPA2063 putative NosF protein (an ABC transporter)chromosome CDS2326036 906 + 0.677704
penP, penA RPA0362 putative class A beta-lactamase precursor (penicillinase)chromosome CDS392647 876 + 0.690639
ragC RPA1754 putative cation efflux system proteinchromosome CDS1961116 3195 + 0.637246
rmrA RPA4105 putative hlyD family multidrug secretion proteinchromosome CDS4645025 1215 + 0.621399