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2024-05-03 14:02:51

Gene list

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COG category: Defense mechanisms
Organism: Vibrio parahaemolyticus RIMD 2210633, O3:K6

Number of genes found: 71

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Vibrio parahaemolyticus RIMD 2210633, O3:K6
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
VP0038 putative multidrug resistance proteinchromosome 1 CDS42145 3123 - 0.476785
VP0300 conserved hypothetical proteinchromosome 1 CDS296035 1260 - 0.481746
VP0301 ABC transporter, ATP-binding proteinchromosome 1 CDS297291 729 - 0.478738
VP0387 putative HsdS polypeptide, part of CfrA familychromosome 1 CDS387473 1752 - 0.408105
VP0388 type I restriction enzyme M proteinchromosome 1 CDS389245 1491 - 0.470154
VP0395 type I restriction enzyme R proteinchromosome 1 CDS393448 2445 - 0.460123
VP0400 putative transmembrane proteinchromosome 1 CDS398559 816 + 0.4375
VP0413 putative undecaprenol kinasechromosome 1 CDS412499 804 + 0.467662
VP0941 putative multidrug resistance proteinchromosome 1 CDS980397 3114 + 0.473667
VP0978 ABC transporter, ATP-binding proteinchromosome 1 CDS1020348 708 + 0.477401
VP0982 transport ATP-binding protein MsbAchromosome 1 CDS1025315 1749 + 0.448256
VP1015 hypothetical proteinchromosome 1 CDS1064317 1041 + 0.427474
VP1092 acridine efflux pumpchromosome 1 CDS1147285 3162 + 0.489247
VP1167 peptide ABC transporter, ATP-binding proteinchromosome 1 CDS1224418 783 - 0.481481
VP1168 peptide ABC transporter, ATP-binding proteinchromosome 1 CDS1225197 996 - 0.491968
VP1169 peptide ABC transporter, permease proteinchromosome 1 CDS1226192 888 - 0.48536
VP1170 peptide ABC transporter, permease proteinchromosome 1 CDS1227066 963 - 0.46729
VP1178 transporter, AcrB/D/F familychromosome 1 CDS1234695 3102 + 0.471954
VP1224 adhesinchromosome 1 CDS1287200 1377 + 0.485839
VP1225 ABC transporter, ATP-binding proteinchromosome 1 CDS1288850 672 + 0.474702
VP1226 conserved hypothetical proteinchromosome 1 CDS1289445 2511 + 0.469932
VP1359 conserved hypothetical proteinchromosome 1 CDS1442582 864 - 0.454861
VP1431 putative ATP-binding component of a transport systemchromosome 1 CDS1535826 1779 - 0.445756
VP1432 ATP-binding component of a transport systemchromosome 1 CDS1537608 1740 - 0.470115
VP1479 multidrug resistance protein NorM (Na+/drug antiporter)chromosome 1 CDS1590882 1371 - 0.477024
VP1609 ABC transporter, ATP-binding proteinchromosome 1 CDS1705491 1797 + 0.436283
VP1659 hypothetical proteinchromosome 1 CDS1777610 1824 - 0.450658
VP1715 conserved hypothetical proteinchromosome 1 CDS1828581 1167 + 0.473865
VP1717 conserved hypothetical proteinchromosome 1 CDS1829744 1152 + 0.467882
VP1989 putative secretion proteinchromosome 1 CDS2083820 1065 + 0.49108
VP1995 ABC transporter, ATP-binding proteinchromosome 1 CDS2090036 720 - 0.501389
VP1996 conserved hypothetical proteinchromosome 1 CDS2090778 1284 - 0.499221
VP1997 conserved hypothetical proteinchromosome 1 CDS2092064 1215 - 0.488066
VP2142 hypothetical proteinchromosome 1 CDS2251354 2508 + 0.395534
VP2449 Na+-coupled multidrug efflux pumpchromosome 1 CDS2570131 1347 - 0.460282
VP2472 putative multidrug resistance proteinchromosome 1 CDS2596243 3132 - 0.465198
VP2510 putative permeasechromosome 1 CDS2647728 771 - 0.45655
VP2511 ABC transporter, ATP-binding proteinchromosome 1 CDS2648499 918 - 0.437909
VP2521 AmpD proteinchromosome 1 CDS2661441 552 - 0.434783
VP2853 conserved hypothetical proteinchromosome 1 CDS3020510 1383 + 0.510484
VP2854 hypothetical proteinchromosome 1 CDS3020404 216 - 0.5
VP2943 DNA-damage-inducible protein Fchromosome 1 CDS3147308 1350 - 0.491852
VPA0015 ABC transporter, ATP-binding proteinchromosome 2 CDS13813 699 + 0.51073
VPA0033 putative ABC transporter ATP-binding proteinchromosome 2 CDS27813 858 - 0.483683
VPA0061 hypothetical membrane proteinchromosome 2 CDS51995 1341 + 0.483967
VPA0097 putative secretion proteinchromosome 2 CDS88863 1026 + 0.497076
VPA0224 putative ABC transporter, ATP-binding proteinchromosome 2 CDS226201 1965 + 0.497201
VPA0344 putative multidrug resistance proteinchromosome 2 CDS334826 3159 + 0.465654
VPA0363 putative efflux proteinchromosome 2 CDS356942 3063 - 0.499837
VPA0416 hypothetical proteinchromosome 2 CDS410445 1110 + 0.445946
VPA0435 hypothetical proteinchromosome 2 CDS425599 960 + 0.416667
VPA0471 putative multidrug efflux membrane fusion proteinchromosome 2 CDS468733 3141 + 0.491882
VPA0477 beta-lactamasechromosome 2 CDS476708 852 - 0.480047
VPA0488 putative transmembrane proteinchromosome 2 CDS493691 1101 - 0.491371
VPA0489 putative ATP-binding component of a transport systemchromosome 2 CDS494788 927 - 0.490831
VPA0560 putative ABC transporter, ATP-binding proteinchromosome 2 CDS559010 714 + 0.483193
VPA0792 putative ATP-binding/permease fusion ABC transporterchromosome 2 CDS818952 1761 - 0.473027
VPA0809 transporter, AcrB/D/F familychromosome 2 CDS838333 3060 + 0.462092
VPA0939 putative adhesinchromosome 2 CDS970660 1386 + 0.458153
VPA0944 putative cation efflux system (AcrB/AcrD/AcrF family)chromosome 2 CDS977122 3309 - 0.486552
VPA0975 hypothetical proteinchromosome 2 CDS1021027 1386 + 0.481241
VPA1190 putative acriflavin resistence proteinchromosome 2 CDS1260174 3153 - 0.487789
VPA1218 putative secretion proteinchromosome 2 CDS1290924 1056 - 0.480114
VPA1227 conserved hypothetical proteinchromosome 2 CDS1298788 1383 + 0.472162
VPA1260 hypothetical proteinchromosome 2 CDS1334950 645 - 0.43876
VPA1434 putative hemolysin secretion ATP-binding proteinchromosome 2 CDS1509953 1827 - 0.477285
VPA1480 conserved hypothetical proteinchromosome 2 CDS1580281 1131 + 0.478338
VPA1581 putative membrane proteinchromosome 2 CDS1678268 891 + 0.476992
VPA1709 hypothetical proteinchromosome 2 CDS1828647 552 + 0.487319
VPA1715 ABC transporter, ATP-binding proteinchromosome 2 CDS1833293 1851 + 0.483522
VPA1736 toxin secretion ATP-binding proteinchromosome 2 CDS1856957 2115 + 0.488889