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# Nitrosomonas europaea ATCC 19718, ATCC 19718

>NE2379 ATPase component ABC-type multidrug transport system
MTPAIEVRQLSKRYGKLVALDNIDLVVQPGEFFALLGPNGAGKTTLISIL
AGLTRASQGSARVMGYDVLSGYREARKRLGVVPQELVYDPFFTVREMLVI
QSGYFGIRCNDAWIDEILQHLDLADKAHTNVRALSGGMKRRLLIAQALVH
KPPVIILDEPTAGVDVDLRQSLWQFIRQLNLEGHTVVLTTHYLEEAEALC
NRVAVLKQGRIAALDSMHNLVRSTRDYTLELRLSTDTLPSGLGTWPGGHD
GCLHNLKIKNYTEIEKILSVLRQSGIEVLDMRLLQPDLETVFMKIMETDA
AGIS
>NE0826 DUF214
MKLRDLLHFSLRTITSYPARSFLIMLAMALGVAAVIILTALGDGARQYVV
NEFSSIGTNLIIVLPGRAETAGSFPGAVMGQTPRDLTLEDAHWVGRLPQV
RRYAPLNVGVAELSATGKLREVTLMGTTAEIFPIRHMKLAQGRFLSHSGE
NSAQIVLGAKIAQEFFPDGNALGQRVRLGDRRFLVTGIMAVQGESMGFNS
DELVIIPIQHAQTLLNTTSLFRLLIETRHHNEIENAKEAIHQALIRRHDG
EDDVTVIAHDAVLATFDRILRALTLGVAGIAVISLAVAGILVMNVMLVSV
SQRTAEIGLLKAIGTPASAIRHIFMAEAVWLSVTGAFAGFVLGQAGSWLL
RLAYPLLPAWPPLWANFAGIAVAVLAGVLAGLLPAIRAAKLDPVMALSKR
>NE1799 conserved hypothetical protein
MACPEATFFHRAGWKQVIEQAFGHKTWFLYIEEGGCIQGVLPLAEIDSLL
FGHSLSALPFCVYGGIAAISDDARIRLDQAAQMLATYLKVDYLEYRHLHP
FHHDWPTKDLYVTFRKTMDSDVEQNMLAIPRKQRAMVRKGMKYELQSYLD
QDTDHFFRAYSASVHRLGTPVFSRKYFRLLKSVFAEDCELLIITKDENVV
SAVMSFYFRDEVLPYYGGGTDAARDLAGNDFMYWELMRRACERGYRVFDF
GRSKRGTGSYSFKKNWGFEPQPLFYEYQLHQAKTIPEHNPLNPKYQLFIK
AWQKMPLALANMLGPHIVKNLG
>NE1404 ABC transporter, ATP-binding protein
MSLTPVLELSNVSKTYSSRQVLSGLSYSFAAGEYVAIMGDSGVGKSTLLN
LIAGLDSPDSGEIRIDGKILPVEDEAATNLRRRHLGFIFQAFHILPHLTL
LQNVSLPLLLNRLPLDRAPVMLTAVGLQGREQDFPHQLSGGELQRVAIAR
ALVHRPRLILADEPTGNLDQDTAHEVLQLIRTEIKANQASAIIVTHSRLA
AETADKILMLSKHGLTPVPLENQT
>NE1210 putative ABC transporter permease protein
MKSASGQEKSIVVRRFDPARFVALVRKESLQAMRDPSTLLIALVLPLILL
FLFAYAVSLDVRHVRIGVVLESPGATARTLADAFSGTHYLDVTFAYDRRE
VAGKLIAGELRGYVVIPQNFERHFADTGSPLVQIITDGSQPNTANFVANY
AQGVVQTWMASLTETMPMPAVQLEPRYWFNPELASRRALVPGAIAIIMTI
IGTLLTALVVAREWERGTMEAILSTPASVLEILVGKLLPYFVLGMLSTLI
AAALAVFLFNVPLRGSLFALLVLSAVFMMPALGQGLLISSLARNQFLASQ
LALFSGYLPAFMLSGFLFEIDAMPALIRAITWLIPARYFVSSLKTIFLAG
DVWSVFLPDLLGMATIGLIFFLIAQRYTRKSLE
>NE1405 DUF214
MNPVSLTRWLLLGEWCSHRLQSVVAVLAIMLGVALGFTIHLINTAAVSEF
SAATRSLSGTSDLTVRAVQSTFDESLYPTLMQHEGVAQASPVLEITAGVP
AKAKSMHNPVFKILGLDVFRATAVTPDLLGVPAEDRQMDILASDAVFLSP
AAMEWLSVKQGDSIEVSAGAKRITLRVAGGLTRAHAGQRIAVMDIGAAQW
HFDQLGQLSRIELKLRQGVDRDTFRATLSKELGASYLLTESEDDDERAHN
MSRAYRVNLNILALVALFTGAFLIFSSQVLSTIRRRSQLALLRVLGMTRR
QILRQLLLESGMLGVLGSLLGLALGYLLAATALYFFGADLGAGFFPGLEP
RLHPDPLAALFYFLLGTGVTLSGSLLPAWEAAHAHPAPALKSGSEYTVLA
ALRAPRLAAACLLTGVIFAGLPPVDDLPVFGYLAIVLLLIGSMAALPYLC
ELFFSTLSRALNPNRSSVLYTLAITRLSNASGLAAIALGGVLVSFSLMVA
MAIMVASFRISVDDWLARVLPADLYLHPTIHQDMRGFIPDEQQIIASQPG
IERIDFIRSIPLTFDPARSNITLLARPIDRNDPGLTLPLTEDRLPPGDIP
PDAIPIWVSEAMVDLYGFKTGKRVTLPFADPEQTFIVAGIWRDYGRIFGA
IQMQLSDYRRLTGDDHASDAALWVKEGAAIDTVISALQALPFGDTLEIME
TGRVRAVALKQFDRSFVITYLLELVAIGVGLMGVAASFSAQTLTRIREFG
MLRHIGLSRRQIHRMLTLEGGLLAGFGIITGFLAGTAISLILIFVVNPQS
FHWTMQLHMPWTWLLLMALAVLGAAALTAFAASRHAASGNVIRAVREDW
>NE2523 hypothetical protein
MVSLDEIKAEDWTLNISRYVLPPLQEDIPPLPDAIAAFKDALTRCREAEE
RLAQVMTEGGWLDTVRPEPVEGREQA
>NE1118 putative ABC-2 type transport system permease protein
MLTLLNAFHLGIKELRSLGRDKLMLFLILFAFTGQVYLTATGLPESLHKA
PVAIIDEDRSPLSLRIIDAFYPPHFLPPLIIEQYAADPGMDTGLYTFVLD
IPPDFQRDVLAGRRPAIQLNVDATRMSQAFIGSGYIQNIVTGEVTAFSQR
YRMLPAWPAELEIRARFNPNLSSVWFGSVMEVINSITMLSIILTGAALIR
EREHGTIEHLLVMPLTPFEIMLAKVWSMGLVVAIVATASLVFVVQDLLNV
PIEGSIGLFVMGMTLHLFATTSMGIFLGMVARSMPQMGLLMIIILLPLQM
LSGGMTPRESMPEAVQYLMLAAPTTHFVSLAQAILYRGADFGIVWPEFLA
LLAIGSIFFTLALARFRRTISSMA
>NE0157 probable transmembrane multidrug-efflux system lipoprotein transmembrane
MDFSKFFIDRPIFAIVLSVIIFAAGLIAIPLLPAGEYPEVVPPSVVVRAT
YPGANPKEIADSIAVPLEEAINSVEGIMYMKSVAGSDGSLQVTVTFMPGI
DPDTAAVRVQNRVAQALSRLPNDVRQYGVTTQKQSPTPLMYVNLSSPDGR
YDSVYLRNYMTLNIKDQLSRLKGVGNVGLYGEGDYAMRLWLNPNELAARG
LTASDVVDAVREQNVQVSAGQLGAEPSPQGADFLVPINVRGRLRSEQEFG
DIVLKSADDGQLVRLSDVGRVELGSSDYTLHAMIDNRGSTSAGIFLTPSA
NSLEVARTVYAKFEELAANFPPGIEYRVVWDPTVFVRDSIRAVGQTLIEA
VFLVVLVVILFLQTWRASIIPLIAVPVSIIGTFAWLYLLGYSINTLTLFG
LVLAVGIVVDDAIVVVENVERYIEKGLSPLAAAHQAMKEVSGPIIAIALV
LCAVFVPMAFLSGVTGEFYKQFAVTIAISTIISAINSLTLSPALAAKLLK
GQSAPKDKLTRVLERSLGWLFHPFNRLFLRSSDKYQGTVARTLNRRGIVF
AVYAGLLLATVVLFHIVPTGFIPNQDKLYLFAGAKLPEGASLARTDAVTR
QLNDLASSIEGVEMTESYVGMNALQSVNTPNLAASYVILKPFDQRQRSAE
SITAELNAKLTDIKDGQAYALLPPSIQGLGNGSGYSLYLVDRGGLGYGVL
QNVMTHFQNVIAQTPGMTFPVSSYQANVPQLEVKVDRVKAKAQGVNLTDL
FNTLQVYLGSFYINDFNLYGRIYRVMAQADAAFRQKAEDINNLYTRNSRG
EMVPLGSMVTIQHTFGPDPVIRYNGYPAADLIGDADPRVLSSGQVIAKLS
QIAAEVLPRGITLEWTDLSYQQVTQGNAAAIVFPLSIMLTFLVLAALYES
WTLPLAVILIVPVCMCAALFGIWFTGGDNNIFVQVGLVVLMGLACKNAIL
IVEFARELEIQGKDIVEAALEACHLRLRPIVMTSIAFIAGSVPLVFSYGA
GSEVRYATGITVFAGMLGVTLFGLFLTPVFYVALRKLAHFNHLKSQEG
>NE0720 ABC transporter, fused permease and ATPase domains
MSNHSSAPLIRLLRYGHAFRGRIWLATLFSILNKLFDLAPPVLIGMAVDI
VVNQQSSVFARLGFPEVSTQLWILATITLIVWGFESIWEYLLKLCWRNLA
QSIQHTLRLDAYDHVQKLELAYFEARSTGGMMAILNDDINQLERFLDVGA
NDLIQLLTTVITVGGMFIYLTPGVAWMALLPMPFVVAGSYLFQKRIAPRY
MAVREQVSILNSYLSNNLGGIATIKSYTTEPYELRQIERESQIYQEKNQH
AIALSAAFVPIIRMVIALGFSAIMIAAGLMAAGGELNVGAYSILVFMTQR
LLWPLTRLGETLDLYQRAMASTHRVLDLLQAQPTITDGPQTLPAAQVSGE
IIFDDISFNYERRASTLNHLSLTVHAGQTIALVGATGSGKSTIVKLLLRF
YEPQQGRILLDGHDIRDLRLHDLRKSIGLVSQDVYLFHGTVYENIAYGSS
GAHMEDVIAAARTAEAHDFIMELPDDYQTIVGERGQKLSGGQRQRISIAR
AVLKNPPVLVLDEATSAVDNETEAAIQRSLERITVGRTTIVIAHRLSTIR
NAHCIYVLDKGEVVETGTHEALLARNGLYTNLWQVQTGEKMRAHG
>NE1757 hypothetical protein
MHKPSVHDFSQPDTGNQAVPVYLVAGYLFFVIYGSLVPFSWNGLAFDTAW
ENFQHIPLLELGVASRADLVANLLLYIPLGLLTCGLFTGRSRDPLVLATG
IVLSLLFSTVIALAVEFTQQFFSPRTVSLNDLYAEFAGALSGALLWPLIG
MRLQKITLDILHGGKNARHAALLTYTLVYLILSFFPYDLLLSYDEWQQKL
TSGQMGWLFAPSCGNSCTWKLIPEALLVAPLAIFLFQPLQRTSLILAATT
GIMLGVLIEGLQLTIVSGISQGASIISRMAGMMLGTALIQISPRVNWYWL
HPYIRPLLLLGLIPYLGVLVLINYRLSGNWLGLTEGIERLKEIHFLPFYY
HYFTTELVALMSLLLQAGAYLPVGIGFWLWHRTKLSFNSQHYCISHPGVT
AGILSCVIEAGKLFSPDTHPDPTNVLIAAVSASLACYLLNLLFPVKSEVS
PNNGKLNIPQTTDSDHKVISGSNGKAADQINDPEKITSQHNRQSPPPTFS
ATLSRTETSAFTGASEQQPPPSRRPGWPAIAGTIALLLAGIAAITSPLGA
LWVSFPLIIYSALLWWRPDLWLVWVLAFLPLLDLTPWSGRLYWTEYDTLL
LATAGIGYLRLCFHPYTQPILRRPAALALALFVISTAISLGIALFPLSPL
DQNAFTSYYSSYNGLRSVKGILFALLFIPLLTREWNAPETAARRLALGMS
LGFAAEILYVLWERITFPGLFNFETDYRITGSFHGMHTGGAYIEGFLVLA
APFTVLWAWQQRNTLITLLTIGLYCLGAYCVMVTFSRGGQIAFGLVTVLL
ATGFSGFVLRRRTRIFSSISITILITVLAGTIAWPILSGPYSQSRFATVE
KDVVTRADHWQDSIDIALVRGSPVFGMGSGSFPYAFFWYSSVPARPSTYT
FATEDKNTYLQLGSGETLYFEQPVAVEPGQRYMLTMNLRSQAPNAAITAP
VCEKALLYSFRCFWLSLRLDKVPPGKWGYYEAAISTSEFNTENSRVRRPA
KLSLYNGQPDTTVDVDNISLKDAEGNDLVLNGDFSDGMSHWFFSTDSHLP
WHIKNLFLHIFFEQGWFGLACFIVLTGYLLTRGLIRTWHNDVLHLVLCIS
LGAFLAIGIVDSLIDEPRLAFLFYLLMITGSISDTHPLPLLSGNRTRNTA
>NE1900 DUF214
MNLLTIIGEATRALQTNRLRTALTMLGMIIGVAAVVLMLSIGQGAQTSIN
SAIASMGSHLLIVMPGATSSGGLRWGSGSVKTLTVQDAHAIAELPMVDAT
APVISGTAQLNYGANNWSTVLTGVTPDYFSVNNWEMADGEIFTEGDLRSG
TRVAVLGQITANSLFGNEDPVGKIVRIANRPFTVVGVLVAKGQSLSGRDQ
DDNVFIPLTTAQRQIIGNQFPGSINHMTVRAKTADSMEAAEAEITRLLRQ
RHRISAHMENDFTVRNLTALASVASNTARVMAWMLGAVASVSLLVGGIGI
MNIMLVSVTERTREIGIRMAIGANQRMILTQFLLESLMICILGGITGIAL
GIGGAWLASRIAELEIVITPGMIALAFSFSSIIGIFFGLYPARKAAALKP
VEALRHE
>NE0825 DUF214
MSFLDALRFALRALTAHRMRTFLSASGIAIGIAAVILLTSIGSGIQHFVL
SEFTQFGTNILNITPGKIRTRGASTGSIGSVRLLTIEDSLALKSSRHAIY
TNATVTGNAEVRGGGRSRRVTVYGQGPDFDRAFNMHTAIGQFLPADDPRN
PRAFAVLGAKVHKELFGDANPLGSVLQVGGSRFRIIGVMASKGQVLGFDL
DDTVYIPTARALEIFNREGVMEVQVVYPPTTPLDEVMEDIKRIMVERHGR
EDFTITPQQQMLSTLSTVLDVLTFAVAVLGGISLLVGAVGMITLMHITVN
ERMAEIGLLNALGATPMRIRILFLLESTALSTLGGMIGLMTGSGIAGLLS
VLFSDLPVNIPWRYVLAALILSGVIGLGAGVVPAMRAARLNPVDALRAE
>NE1613 ABC transporter, fused permease and ATPase domains
MRTLITYIMVFPKRSAFVLVALLLAGIAEALSLTALLPLLSIAVGESIDS
SMGKLVVDTLHQVGLSPTLEIILLVIVGGMFLKGAILLLTNQQVGHTVAH
VATALRLDLIKALLASRWQYYLRQPAGALANSIATEAYRAAMGFEHSVNV
LALAIEALVYGIVALFISWEATLASLLIGTILFVVLNRLVRAAKRAGNKQ
THLLRHLLTYLSDVLGSVKSLKAMARDNVADAILHEQTRMLEKATRKEVT
NRAALLALQEPILAALTASGLYLALVVWKLSLPEVMVMVFLLTRILGLLN
KTQRRYQQLVAQESAYWALRNAAEEARMEAERSTGTLVPTLEQGLNLRHI
VFGYERKTIFSDLNLEIPVHSFTALIGSSGAGKSTLLDLLCGLAEPKSGE
ILIDGVSLHHIDLRRWRHMIGYVSQDTVLLHDTILNNILVGEPAISVEDA
ERALRQAGAWDFVSSFPDGIHTVVGERGGMLSGGQRQRIAIARALAHQPK
LLLLDEPTSALDPESERIICATLQNLAKEFTIIAVSHQPAVINAASQVFI
VSNGKAELLSDAAAHLPDITGAKEGN
>NE2244 ATPase component ABC-type (unclassified) transport system
MSSIVRIENVFKEYTLGTSRVHALKDINLQIGNGEFLAIAGPSGSGKSTL
LNLIGCIDIPSSGKIYIDDRDTSGQTPDQLSELRARTIGFIFQTFNLFSV
LSAEENIEYPLLQFKELRAAERRERIVKFLDIVGLAEFADHRPNQLSGGQ
RQRVAIARALATHPKIILADEPTANLDHKTGEGILQLMKDINRNSGTTFI
FSTHDAKVMAMAERLIRIEDGQLVGEDAVHT
>NE1209 ATPase component ABC-type multidrug transport system
MYPVAALPPSSAAEHDDTAIIIDHVDKHFGNVHALRDLSAEIHYGRLTGL
VGPDGAGKTTLMRILTGLLVPDAGHATLAGFDVVANNDAIHVVSGYMPQR
FGLYEDLTVMENMHLYAQLRGMDAGRHIDLFTKLLDFTRLAPFTGRLAGK
LSGGMKQKLGLACALMARPRVLLLDEPSVGVDPVSRQDLWRMVQALTGEG
MAVVWSTAYLDEAERCDSVLLLNEGRLAFAGPPGELTGRLKGRSFRLEAV
GAQRRAVLAEALDLDTIGDGVIQGAGVRVVLRAGAGPEKIQALAGRVGAR
LTPVPARFEDAFIDLLGGGPGGTSALAERLSPVELTSDIAVSCHNLTKRF
GDFIATDNVSFKVHKGEIFGLLGPNGAGKSTTFKMLCGLLKPTGGEAHVV
GLDLRRAPGIAKAQLGYMAQKFSLYGLLSVRQNLEFSAGVYGLDSTTQRE
RIEEMIRIFDLHDWLSAAPDSLPLGHKQRLALACALMHHPPVLFLDEPTS
GVDPITRREFWTHINGLARKGVTIMVTTHFMDEAEYCDRVAMLYRARLIA
LDTPDVLKRDAASADRPDPTMEDAFIHLVETSALTDEVKI
>NE1899 ATPase component ABC-type (unclassified) transport system
MIHPGGSSEPLIEVEKLCKIYRLGNHAGTSLNLQVLFDVSFTIRRGEFVA
IMGHSGSGKSTLMNILGCLDTPTSGHYRLAGHDVSTLSGNQLASVRNRQI
GFVFQGFNLLRRMTALDNVAIPLLYAGYSRAESRRRAMSLLQQTGLEKFV
MHQPGQLSGGQQQRVAISRALINQPQLILADEPTGNLDTQTSHEIMQLFD
RLNREEGMTIVIVTHEEDIAAWTRRLIRLKDGRIIEDRPIAKPVVPLSKS
>NE2527 Restriction enzymes type I helicase subunits and related helicases
MFNESNTVEAYVRDLLAGPIKAVPVNTAQEPQASYGPSPKGVGWRYAAPS
EVPRQNQEVLVEPWLREALIRLNPEIAAQPDRADEVLYKLRAIVLSVRSD
GLIRANEEMTAWMRGERSMPFGANNEHVPVRLIDLDDLSQNHYIVTQQYT
YRAGPTERRADLVLLVNGLPLVLIEAKTPVKKCISWVDAAVQVHDDYEKF
VPELFVCNVFSVATEGKAYRYGSIGLPVKDWGPWHLDGDGEDGQHHPLKS
LKLSAESMLRPHVVLDILGSFTLFATNKKKQRIKIICRYQQFEAANKIVE
RVLAGYPRKGLIWHFQGSGKSLLMVFAAQKLRMHAGLKNPTVLIVVDRID
LDSQITGTFTGADIPNLEKADTREKLQQLLAQDVRKIIITTIFKFGEAPN
GKSGSLNDRSNIIALVDEAHRTQEGDLGRKMREALPNAFLFGLTGTPINR
ADRNTFYAFGADEDEKGYMSRYGFEESIRDGATLKLHFEPRLIDLHIDKA
ALDAAYKDLTGGLSDLDKDNLAKTAAKMAVLVKTPERIRKVCEDIVEHFQ
TKVEPNGFKGQIVTFDRESCLLFKAELDKLLPPEATDIVMSVQAADKKEH
PEYAPYDRSRDEEERLLDRFRDPADPLKLIIVTAKLLTGFDAPILQAMYL
DKPLRDHTLLQAICRVNRTYSEQKTHGLIVDYLGIFDDVAAALEFDDQSV
KQVVSNIQELKDKLPEAMQKCLAFFAGCDRSVQGYEGLIAAQQCLPNNEV
RDNFAAEYSVLNKIWEALSPDTVLGPFEKDYKWLSQVYQSVQPSSGHGKL
IWHSLGAKTIELIHQNVHVDAVRDDLDTLVLDADLLEAVLSNPDPKKAKE
IEIKLKRRLRGHGGNPKFKKLSERLDALKDRFESGQINSVEFLKQLLEIA
KETLQAEKEVPPEEDEDRGKAALTELFNEIKTAETPIMVERVVADIDEIV
RLVRFPGWQGTQAGEREVKKALRKALFKYKLHADEELFEKAYSYIRQYY
>NE0384 Restriction modification system, type I
MAGKWPYKRVEEIALKVAMGPFGSSIKVETFTDTGIPIISGQHLRDAELT
DSEFNFITEEHADSLKNANVQRGDVIFTHAGNIGQVAFIPNHSKYQRYVI
SQRQFYLRCDTSIILPEFVVYYFKSPEGQHKLLANANQVGVPSIARPSSY
LKTIEVPVPSIEEQQVVVRNIKALDVKIRANRRINQTLEAMAQAVFKSWF
VDFDPVKARIAAIEQGQDPLRAAMRAISGKTDLELDQMPREHHDQLAATA
ALFPDTMQESELGAIPKGWQVKRVGDLIELAYGKALKSTDRQEGAVPVYG
SGGITGCHNEALVPHGAIIVGRKGTVGSLYWEDDPFYPIDTTFYVKPKAV
PMTYCFYAMQTLGLNKMNTDAAVPGLNRENVYRLELVKPSTPVLNAFDGL
VAQIRKTMQANETTGQSLAELRDTLLPKLLSGELSVDNTSAEAATA
>NE1081 probable ATP-binding/permease fusion ABC transporter
MVSTDLPPLIELRGIRKRYGGGDKPEVEVLHGIDLDIRAGEFIAIVGSSG
SGKSTLMHLLGCLDRPSSGSYRFAGEDVSTFGSDELAWLRRKAFGFVFQG
YHLIPTESARENVEIPAIYAGLPPGERMQRAADLLGRLGLSDKLNNRPNQ
LSGGQQQRVSIARALMNGGHIILADEPTGALDSRSGAEVMELLRELAGAG
HTVILITHDRDVAAQAQRVVEIRDGRIVADSVTDRQPSEQPLLHHAGLSS
LEMTQAHEDTGTPFWQGLHETIRAAWRVMWIHRVRTSLTLLGIVIGVASV
IVMLAIGEGTKQRVIDQMGSMGTTIMYMSSDVPSTGGPVGVITEEDLDEV
ARLPEISRVMPVIGDPILVRHQNVDKQIYVFSSPYIMPMVHHWRVAQGRF
FTETEDRELAPVVVLGHKIYRSFFPHLSNPVGQYLLIGTSPFEVIGVMAE
RGAESGSQNYDDMVFIPYRAGRARVYQAQEQPDYIVMEAASMDQVQEAEE
AIRALLLERHGREDFRIGNAAARLKTQLETRDTMTRMLGLVAAVSLLVGG
IGVMNVMLMTVRERTREIGIRMATGAREYDILSQFLIEAMLVTITGGTVG
VILGLTVGALLVFWEVPVVFSFGVMIGAFACAVITGLIFGYMPARTAARL
DPVVALSSE
>NE2496 Restriction modification system, type I
MIPMKPTPLRQLAIVSAGQAAPKSDEFSDYGTPFVRAGSLDRLLSGEPES
GLELVSEETARRRKLKTYPRGTVLFAKSGMSATKDRVYVLQNPAHVVSHL
ATLIPKSGTHIDYLRLALKHFPPSSLIKDPAYPAIGLGDIEDFKIPTPDS
SDAQIRIAHLLGKVEGLIAQRKQHLQQLDDLLKSVFLEMFGDPVRNEKGW
DKPALTAFGKISTGNTPPRSESVNYDGDFIEWIKTDNITGDAVCVTPSTE
HLSEIGARKARTVTSGALLVACIAGSVESIGRAALTDRTVSFNQQINAIQ
PGKDVNPLYLYGLFKLSRSYIQSHATKGMKKILTKGDFEKITMIKPSFEM
QNRFAVIFEKVESIKSRYKQSLADLETLYGALSQQAFKGELDLSRVPIPA
QLVAPVSPGDQATVPEPVVQTVPAIHLPDTGNLLAALENSEARKALIAEW
LEAYRQQLGDAPFSVQDFMVAVSDRLTEWLQTVVEDEGVTDEQKNRLAEF
YPSNDVGLDVNDYEHIKKWVFEALAAGALTQGGNKVGNRIELKAVQS
>NE1211 putative ABC transporter permease protein
MFYHDFRTMLIRLRAQFIKELLCILRDPRNRVVVFVPPLMQLLIFSYAAT
MEVRNLDIAVYNQDTGRAAQELVWHLEAARFIAQVHHVHSNTALREQLVQ
GKVIAAIAIPADFSRTVAVSGSGHAQVLVDGRRSNSGQIVVGYLSSIARD
IRFTADTAPIPETSVTVRHWFNPNLVYLWFMVPGLTGTLAFFSALMITAL
SIARERELGTFDQLLVSPASTLEIILSKSLPALVISSLLALLMITLAIWF
FRIPFTGSFGLLLIGLVLFILSAVGIGLVISAISMTQQQAILGGFVIGVP
TVLISGFATPVENMPLLLQWLAQAIPLTHFLIIIEGCFLKALPPRDVLAN
LWPLAVIAFTMLPIAMIFARSRLQ
>NE0376 ABC transporter, fused permease and ATPase domains
MLRYFERLINPFPSGKLTEPPATLYRFCRHYMKGAEIYFILLAIATFCVA
VGEAMLFGVLGTIIDWLAEKDPQAFLQEERLTLLGLSLFILIAMPVIVFF
HSVILYQSLMGNFPMVVRWLSHCYLLDQSYAFFQNEFSGRIATKVMQTAL
AVRETIIKTLDVLLFVTVYLATALLLIANADLRLCIPLIIWLAVYLCILR
YFIPKLRHISRIQADSRSNMTGRIVDSYANILTLKLFSHTRRESDYARDG
MQEFLDTVHPQMRLVTQLNTCVWINNMLSVFAIGTLGILLWLDTSISTGA
IAIALSLAIRLTGMSHWIMLEVGELFENIGIVQDGMNMLAKPYAVTDTPD
AIPLFVTKGQIDYNQVEFSYHNDIKNEDHRIFKALDLHISSGEKVGIVGP
SGAGKSTLINLLLRFYDIRQGSIQIDQQDIRTVTQESLRANIAIVTQDTS
LLHRSIRENILFGRPDATKEEVILAAQRAHAHEFIQELVDSYGRRGYDAM
VGERGVNLSGGQRQRIAIARVLLKNAPILVLDEATSALDSDIEASIQQSL
HELMQNKTVIAIAHRLSTIAAMDRLIVLDNGHIVEQGRHAELLSLNGLYA
RLWNHQSGGFLGHLDHSSGSHDETC
>NE2450 putative Mrr restriction system protein
MSIPKHDQIRVPALLLLAERGQLKLSDFEQPLAKYFGLSDGEVQEEYESG
KGKIFYDRISWALSYMNMAELLNKPKRGLYQISELGREKLKTPNIINQFI
AEQIAKKQENKPSKIGKITVSEENLTPQEELYESAKKIRQACYQEIIDTI
LSKKPHAFESLVVLLLQKMGYGGEIKQSGLVTPYSNDGGIDGIIKEDVLG
FGRIHIQAKRYALENSVQRQEIQSFVGALAVAQSNKGVFITTSSFSRGAI
QYAVGLNGSTTLILIDGQKLAEYIYEYGVGLQVEHTVEIKKLDSEFWDSM
ENEAGVPDL
>NE0159 ABC transporter, fused permease and ATPase domains
MNNTTRKQIMAPATYWAESLLLAARQLGLQTSPECVRGAASWVGCDDPNA
AVLDIAAQAGLSAKFVEISLTRLSPIMLPALLELDDGQIGLLIDIDAGRA
TILLTLEGKVLERLLPIDNHPRLLLLVHERTAPRKDRVNDYLVTTTDHWL
RDIFISHWKTLFELCAGSLFSNLLAICTALFAMQVWDRVIPARSINTLWV
LASGVAMALLLELMLRMMRVTIADHFGKNADIKLSSMFFARVLDIRNDAR
PRSPGSLIAQLRDLEQLRELLTSSALGVLIDLPFVFAFLLIIWVLGGWLV
LVPLAAIPLLVLPGVLAQYPLAKLSKEGMAEAALRNAILMESIYRIEDIK
TLQAEPRFRQLWDQTNFINADISLKQRYLSGLLMNLSQTVQQLAYAGVLI
EGVYAILDTDLSFGAVMACSILTSRTIAPLSQIPAVLSRLQNARVGKDGL
DKLLELPIDHPVDKNTYHKPVLLGRYEFENVSYSFDPQEKPVLTIPCLSI
RPGERIAILGRVGAGKSTLLRVLAGLAIPQQGRVLFNDTPISMIDVADVR
RDIGTVLQEASLFYGSLRENLLLANPLATDEELLAAMRLSCADQLLLKQP
HGLDLLLRENGFGLSGGQKQSLILARTFLRTPNVLLLDEPTASLDENTER
NIIENMRQWLGGRTLIVATHRYPLLSLVDRIIVIDSGRIVRDGPREEILA
AIRSLAANSQNVAHSKTHIQVHSQPQRQPQTTGTSP
>NE2524 possible type I restriction-modification system methylation subunit
MKRISQQELESYLWGAAVLLRGLIDAGDYKQFIFPLLFYKRVSDVWDEEY
QAALANSGGDLSYAQFAENHRFQIPAGAHWNDVRQTPKNVGAAIQKAMRA
IESANPDLLDGIFGDAPWTNRERLPDETLKNLIEHFSTQTLSVANVPEDE
LGNAYEYLIKKFADDSGHTAAEFYTNRTVVHLMTQLLAPQAGESIYDPTC
GTGGMLISALDEVKRAGGEYRTLKLYGQERNLITSSIARMNLFLHGVEDF
EIIRGDTLAEPKHIEGDRLRQFDVILANPPYSIKQWNREAWSSDKWGRNS
LGTPPQGRADYAFQQHILTSLTAKGRCAVLWPHGVLFRNEEQSMRAKMVE
QDWVEAVIGLGPNLFYNSPMESCIVICNRKKAAARKGKVIFIDAVNEVAR
ERAQSFLKPEHQQRILTAYKTFADVPGFAKVATLAEIGANAGNLSIPLYV
KRIAAAIATDSNDDAVSLRSAWDQWQADGRAFWQQMDALVETLDGLVAQE
AADA
>NE0540 Acriflavin resistance protein
MKLIIWFVKNPVAANLLMILIIVGGIVGLITADRYVYPPEPRHQLQITTI
YDGAGPGEVEQAICIPIEHAVHDLQGVRHLHAEAKQSLCRVLVEFDPAVD
ATRLQAEVQARLEAVTVFPEDADKPVIRELKTGPQAIIATVRGMADLRTL
QHYRDRLHIRLSTHPDIGQILLFPEIPYEVSIEITREDLRRYGFSFDEIA
EMIRAVSGNISAGELKNTDGRLLIRSQAQAMTAEDFAAIRLRSDRQGMQL
KLGDIAHITETVRDQSMLVRSDGLPAMEILIWPRNQLGKTVDAVNQVITA
FHSELPADVEVITWDDWSKYYDENMSMLRGNAISGFILIFVVLALVLDMR
LALWVSAGILISVFGAFWWIPILGISLNVYTITALILILSVVVDDAIIVG
EHIYLLQQRGQSGISGAIGGVRAMAPLVVPMVLTTVIAFTPGLLLPGLTG
HLLYNISAVAILALLFSMTETLLILPAHLAGQSPKDPDAATGIMPHFLRY
AMATLKEQVDNGLRWLTGCYTRALHLALQWRYIVIAGFTAALLLIAALVI
SGRITTVLDRSVDDYYLVGMLKFPAGTAFEEVDRQLFRLGHIAHEIRAEL
NQKYYCDDSAENGDSVRHVLMFSNDNVAVVNLEMAIDDRIRDQVDDIKQQ
WRERFGPLPAGTTLTLQSFWPRDLGVSTEGPPKAIEWVLTAPDTAVQNAA
GEILKHKLAAYAGVHSVTSSMQPGKPELHLELKPAAAFYGLTMRDLSEQV
RHGFFGLEVQRYYHEHDEIRVMLRFPQEDRQALEQLQNMPIRLPGGNSVP
FGTIARAEYQSGFASIQRTDRERIQLIGAEVYQDQVDVESILADMRVHVI
PQLKAQFPGLDIKPGESRQKQEEVMSDLWLYGVLALFGMYALLAIPLRSY
AQPLIIMLTVPFGFIGAVVGHLLFRIPLSLESYFALFAVSGIVINDSLVL
IAQINKNLQQKISVIRAAVAAGKSRFRAILLMNVTTLAGLLPQLSSQGYD
AEKIMPMAVTIAFGMLFTFFVTLFLVPAVCVVFNKNIQSG
>NE1759 conserved hypothetical protein
MKFSHNCTYNLFAFCTSFSYRYAPWVLLIALLFTVASAVYTARNLGMNTD
TTDMLSEHLPFRINSVKYDKAFPQDSGILLLVLSAPTPEQAYSTASRLVV
SLKKDSKNFSDVYAPGTDDFFGRNGLLYEDIPQLNHIADHLAEAQPLIAQ
ISRDPTLYSFIGLLTQAVDELNKGQYLELGPVFNGVSETMDARLAGKSRP
LSWQTLFRGEPAKTSYQEIIIVKPRPDYSELLPGKQPILAVRTAAEQIGL
TDDGPIQLRITGDVALADDELKSSLDGMEVAGVVTFIMVGAVLYSAMHTV
GMTLAVLICLGVGLILTAAFATVAIGQLNVISIAFAVLYIGLGADFAIHF
LLRFREMLENGLSANDAIYKAGGEAGVALTACTVANALGFYAFIPTSYSG
VAELGIISGTGMLISLIVTFIIGPALLRYLSGRSAVEPNGRKTLGKALEF
SLKWRKLTHISVGLLLLLAIVLWPQIRFDYNLLNMQDPKGEAVQTFRELL
ASPDHSPWYAVVLTEDRKEIQQLQNNLIKLPEVSKVVSILDLVPSEQEAK
LAVIEEMSLIMGPGLSVTRSATHEHTIPQQIQALTTLNTALDRYLVQHPD
SAVSASARGLRDSVRSLLDRLDKADAGERQKLLRSLEEDLLSTLSVALQR
LYNLIEAVPFSEQELPESIAGRWHSHTGEYRIAVYPSEDIGDNGLLRHFV
RSVQQVAPQATGMPVISLEAGDAVIDAFFQAFSLALVGVVVALLIMLRSI
KYTVLVLIPLLLSSIFTGVFTVLLDIPFNFANIIALPLLLGLGIDSSLHM
VHRSMDNRVENEILIHTSTARAIFYSALTALVDFASLMFSSHKGTASMGA
LLTVGLAFTLICTLIILPSLLRNPNRQRVVA
>NE2497 hsdM; type I restriction modification enzyme methylase subunit
MLQNNPELKSKIDQLWNKFWSGGISNPLTAIEQITYLLFMKRLDELDQKR
QADARDGWSDPYQSKFEGTWIPPEERNWPVAEQRPIDKRTLRWGEFKRMQ
AEEMLQHVQGKVFPFLKDLNGAESNFTHHMKNAVFIIPKPALLVEAVKTI
DEIFEVMEKDSRENGQSFQDIQGDVYEMLLAEIATAGKNGQFRTPRHIIK
LMAELVQPQLGHKIADPACGTGGFLLGAYQYIVTQLAINAGTQTLTPDED
GFTRTSVAAAFDEKRQAILASSLWGYDIDQTMVRLGLMNLMMHGIEEPHI
DYKDTLSKSYTEEAEYDIVLANPPFTGSIDKGDINENLQLSTTKTELLFV
ENIYRLLKKGGTACVIVPQGVLFGSGKAFKDLRQTLVEHCDLKAVITLPS
GVFKPYAGVSTAILLFTKVWGMKDKVAKPATEHVWFYEMAADGYSLDDKR
TKQEGYGDLQDIIAKYHARDATTDTNRTAKCFMVPRADIESENYDLSLSR
YKEDVFEEVQYDAPGVILDRLIQAEVGDVDEAELAKVQSGIVRELLELKG
MVE
>NE0919 ABC transporter, fused permease and ATPase domains
MQSNISDLPHTVPPDFPSHWQTWIGPILNEHEQIHAWLETDLDGQLNFSS
GLVVITTHRIFSRMANDENWQVWPCRQDMKLTYQDHAGVCSIELSDTHAR
LACWHCTLGRHQAVDQLITHFSRLITAHDAATELTGSNVADNESASESSP
ASDQEATATPPSTWTLFRLWRFARPYKWQLLIGFILMLGSTAAALVPPYL
TMPLMDNVLIPYQNGHPIDVDLVTFYLSGLLAAAILAWILGWLRTYTLAR
VSERIGADLRTTTYEHLLSLSQAYFGGKRTGDLMARIGAETDRINLFLSL
NLLDFATDVLMITLTVIILVSINPWLALITLLPLPIIAWLIHLVRDRLRV
GFEKTNRVWAEVNNVLADTLPGIRVVKAFAQEEREIERFRTVNQRNVEIN
DRVNKVWALFTPTVTLLTECGLLVVWIFGIWQVSQDHITVGVLTAFLAYI
GRFYLRLDSMSRIVSATQKAAAGTKRIFDILDHVSSVPEPVKPVHLPVMK
GHIELRNVSFRYGTRRVIQNLDFTIEPGEMIGLVGHSGSGKSTLINLICR
FYDVTDGSILIDGVDIRALPIAEYRKHIGLVLQEPFLFFGTIAENIAYGK
PGASRKEIIAAARAAHAHEFILRLPYGYDSLVGERGQALSGGERQRISIA
RALLIDPRILILDEATSSVDTQTEQEIQGALDNLVSGRTTIAIAHRLSTL
QEASRLVVLDHGRIVETGNHEELMARQGHYYQLYQSQSRSSDDENRPDTS
EKIMDIRGNRV
>NE0168 multidrug resistance protein MexB
MNSRFFIERPIFASVLSIIIVIVGLVSLKNLPIAQFPEITPPVVQIDADY
PGASADVVAEAVARPIEVQLPGIDNLLYYESTSTNDGHMTMRLTFEIGTD
IDIAQVQTQNRQKLAEPQLPDEVIRQGITVKKTSPDLLLVVALSSTDPSH
DTIFLSNYALLRVLDNIKRLPGVGDASIFGGQNYSMRLILDPVRMAQLNF
TPSDIVAAVREQNRDFPAGRIGREPMVNETELTIPVMTKGRMSEVKEFEE
MIIRAYPDGSMVRLKDVSRVELGAQSYDLQARWNGRPNTFLLTYLSPGAN
ALETAQRIRNEMDKLAKDFPAGASYDVPYDTTTFIEVSIQEVVKTLAEAL
LLVVLVVFIFLQSWRATLIPAIAAPISLIGTFMGMEALGFSINTLTLFGM
VLSIGIVVDDAIVVVENVERHIAEGLTPKNAAIKAMQELFGALIAIILVL
ASVFLPVAFLGGITGELYKQFAVTIALSVMISGFVALTLSPALCALVLKP
GHDSPNKLWKTFNRTFDWAQTRYVSMAGTIIKRSALSILIFLMVIFFAIG
LFKTVPGGFLPEEDQGYFITVVQLPDGASISRTQKVLEKIESYFLSIPSV
HSTDAMAGMNFVFSSRGPNHATMFVPLHHWDTRKNADEQVQNLIANAFGE
FAKIPEALVLAFNAPSIRGLGATGGFSIQLQDPSGGDFSEFAETAQAFVN
KAMEHPAIGIAGTNFRVSAPRMYAHVDRERAKALGVPISDVFDTMQAYFG
NLYVNDFIKFGRVYRVQTEASPEYRSSPDNISNIYVRAQSGTTSTMIPLD
SVVTTEFNSGPDPVTHFNGFNSALVLGSAAPGYSSGQALDALQEVANEVL
APKGYTIDWSGITYQEKMAASGQKIWILSFALLMVFLVLAALYESWSVPF
AVILAVPFGILGALLAIWARGLTDDIYFQVGLITLIGLSAKNAILIVEFA
SDLYAKGASLTEAALEAARVRFRPIIMTSMAFIMGVFPLAISSGAGAASR
IAIGTTVLGGMLAATFLAIFFVPLFFVLIGKITRRDKHPTPEPVQAETGD
QAVTTNEKEDTDGK
>NE2378 ABC 2 transport system integral membrane protein
MTGFYTLFHKELLRFWKVSLQTILAPVLSSLLYLLIFSHVLAARVEVYGS
IPYTVFLIPGLVIMAVLQNAFANSSSSLIQSKITGNLVFILLSPLSYLEI
FLAYVSASTLRGLMVGLGVYAVAAWFYPLPLQSLFWVVLFALLGSALLGV
MGVIAGIISDKFDQLAAFQNFIILPLTFLSGVFYSIHSLPPVWQFLSHLN
PFFYMIDGFRYGFFGVSDISPYISMIVVSCCLAAISGWALWMLKSGYKIR
S
>NE2549 ATPase component ABC-type multidrug transport system
MFIDVTSNSPHPVIEANGLSRHFGDRVAVHDVNLKLHRGDILGFLGPNGA
GKSTTMRMLTGNLAPSSGSVHICGTNLLDDPLEAKHHIGYLPEIPPLYKE
LTVDEYLRFAARLHGLAKTSLQIALDEVKQQCELNDVGKRLIGVLSKGYQ
QRVAIAQAIIHRPQLIILDEPTVGLDPNQIQKVRALICELGKTHAIILSS
HILSEVESVCNRVQIMHQSKLVLDDSLDNLKRQNMNLENIFIQLTAGNTP
TGESVQ
>NE2522 type I restriction-modification system methylation subunit
MSDQHITLSQLESHLWESANILRGPVDAADFKTYIFPLLFFKRICDVWDE
EYQEIVDETGDEQLAWFPESHRFQIPEDCHWNDVRTKASNVGTALQRAMR
EIEKANPDTLYGVFGDAQWSNKDRLSDALLKDLIEHFSKLPFGNKNVSSD
LLGDAYEYLIKKFADATNKKAGEFYTPRSVVRLMIDMLDPKEAETIYDPA
CGTGGMLLAAVQHVKEQHGDVKRLWGKLYGQEKNLTTSSIARMNLFLHGI
EDFQVVRGDTLRNPAFFEVDRLATFDCVIANPPFSLEKWGEDLWLNDPFG
RNFAGLPPSSSGDFAWVQHMVKSMADVIGRMAVVLPQGALFRKGVEGSIR
QKLLEMDLVEAVIGLAPNLFYGTGLAACIMVCAKRKPAKHKNKVLIADAS
RLFRRGRAQNHLEPEHATEILSWYRGFADVQDAVPWSVSTRSRPKTGR
>NE0827 ATPase component ABC-type (unclassified) transport system
MIQLSGITRIFHMGDQAIHALDHIDLTIESGEYVSIMGPSGSGKSTLLNV
IGLLDRPDSGHYLLDGRNVTDLSETEQAQVRREKIGFVFQSFHLIPRLTA
AENIELPLILTGMPPADRKIRIMETLQAFNLSDRAHHRPAELSGGQRQRV
AIARATILRPTALLADEPTGNLDHRIGSEVAALLEALNQTGTTLIVVTHD
RELGSRARRRIAMRDGQIDVDER
>NE1784 ABC transporter, fused permease and ATPase domains
MTSNRWQAVLKTAAFLKPYKLSLSFSLAALFLTAGITLSLGQGIRLMVDR
GFATQSPDLLTRYVLVFLLLVVLLAIGTFTRYYWVTWLGERVIADIRRKV
FAHLIELHPGFFEANRSLEIQSRLTADMTLLQSVVGSSISVALRNLIMLA
GGIVWLFITNVKLTVIVMLSIPLVIVPILLFGRRVRVLSRQSQDRVAAVG
AYVGEMLGQIKTVQAYNHQAMDKMHFDQYVEDAFHIARQRTLQRAWLIAV
VIVLVFGAIGMMLWVGGMDVIEGKISGGELAAFVFYSIIIGSAVGSISEV
LGELQRAAGAAERTMELLEEPSQISSPVDPRQLPAVTGNIVFQRVCFAYP
SRPEIQVINDFSLAVRPGETLALVGLSGAGKSTLFDLLLRFYDVRSGCIS
LEGVNIRDLDLSDLRRSFALVSQNPVLFHGSIEQNLRYACPDASDAEIEM
AAKAAFIHDFIVSLPQGYQTSLGDTGLGLSGGQKQRLAITRAILADAPVL
LLDEATSALDSQSEHWVQQAITRLSTGRTTIVIAHRLSTILTSDRIALIH
HGRLEALGTHVELMESSELYARLAIAQFQIPG
>NE2526 Restriction modification system, type I
MIERDLKPGWRRVKFGDVVRQCKEKADPETSGLERYIAGDHMDTDDLRLR
RWGEIGSGYLGPAFHMRFKPGQVLYGSRRTYLRKVAVADFEGICANTTFV
LEPHNPNELLPEFLPFLMQTEAFNDFSVKNSKGSVNPYINFSDLAKFEFV
LPPIDEQQSAIALLSAATDQCHAVEAAHRAAGRMLQSFKDSLLLRKTSSL
ANSFLLGDLLLRSPESGCSAPPKDADTGYFVLGLAALSRDGYVSGDFKPV
EPTSKMVAAKLSMGDMLISRSNTVDRVGFVGIFSDNRDDVSFPDTMMRLQ
PNPALVHPHFLEALLQTTSAREFLMRIAAGTSASMKKINRANLLQMRLNV
PDLDVQEMALDELQQFKNAIATQKARWDAARQLTRLIAMRTIGGAA
>NE0054 ABC transporter transmembrane region:ABC transporter
MPDKQPAPPIELLTRFVTRSGSHWLTLISILIAGGLFALAITLIPLVVGQ
LFTQILPGGNRQLMQSLPLILMILLLAAIFADWVVYYVLERLLGRAILDI
RTELFKKLLALPPACSDFPAETISLYFFQSIEKLGHNVSLLGVCLSRDLL
TAAGLLGVMAWLNPEMSLLVLAMLATIFFIGQIFRANARQQDMLGQKQYE
VSRCLSKALRLNRIIHLDKGYKQEIRHTRNSFEQLQSFLQKQFRQTKLME
LLAYVLLIGVLTASLYYLLQQLASNQLTAGDAAAFFMAGAMLIFPLQRLF
SINLLLKQCSEALQVIFPLLNQDSRIVEENPYTTQFRRGKGKLRFEGVSF
RGGATECQLPHFNLEIASGQKIALINRDANINRLFADLVCGFVQPSTGRI
LLDDNDTKRINPAELCSYIAWIAADEDLLGDTVAINIAYGSACCSREIAI
TTAAHASQAMEFIRKLPQGLQTKINQPALIFSDDQRQRILIARALLKNPS
IIILDETTACFNTDNTALLQALQVLLNNRTVLILSSRPVMLNLAGQQFDP
EKPALISACHSDGCTVR
>NE1112 RND multidrug efflux transporter
MARFFIDRPVFAWVISLLIILAGLLSIRGLPVAQYPDIAPPVINVSATYP
GASARIVEESVTAIIEREMNGAPRLMYTSATSSPGSANINLTFRQGTDPD
LAAVEVQNRLKMVEARLPEVVRRNGIFIEKSADNIQLVVSITSNDNRLTE
IELGELASANILQALRRVEGVGKVQSFSPEYAMRIWPDPAKMTSLDLTAS
DLASAIRSHNARVVIGYIGDKAVPEHAPISANVAADKALATPEDFKNITL
RTKADGGAILLRDVARVEYGGSDYSFFSRVNGKNAAGMAVKMAPGSNAVA
TVERIRNTMDELSRYFPPGVSYQIPYDTSAFVEVSIQKVVNTLVEAVVLV
FLVMLLFMQSIRVTLIPTLVVPIALLGTFAVMYGLGFSINVLTMFGMVLA
IGIVVDDAIVVVENAERIIVEEGLSPYEATVKAMQQISGAIIGITVVLTS
VFLPMAFFSGAVGNIYRQFSLSLATSIAFSAFLALSLTPALCATLLKPVD
KEHHENKRGFFGWFNRTFISLTNRYQHRVGQILKRPVRWLVVYGIIIAAV
ALLFARLPTAFLPEEDQGDFMIMVMLPQGATMHETMNTLGEVSQYLQENE
PVKYVYEVGGFSFYGTGASSGMIFATLQDWEERKHADQHVRSIVERVNMH
FYGRPNLTVFALNTPPLPELGSSSGFDLRLQDRGNVGYKTLAAARDRLLA
EGGQHPVLTNLMFAGLAEAPVINLDINRRKAQALGVTMDEINATLAVMFG
SDYIGDFMHGNQVRRVIVQADGKNRIELDDIRKLRVRNAAGKLVPLSSFV
SLEWGMGLPQLTRYNGFPSFTINGNAAAGKSSGEAMREIEHIVAKLPNGI
GFDWSGQSLEERLSGDQAPFLFGLSVLIVFLALAALYESWLIPQAVILVV
PLGVLGAVLGVTLRDMPNDIYFKVGLIAMIGLSAKNAILIVEVAKELYDS
GMSLIDATLEAARLRLRPIIMTSLAFGAGVLPLALATGAASGAQTAIGTS
VFGGNVMATALAIFLVPLFFAVIGRYIKRSRHS
>NE2452 abcT3, ABC transporter, fused permease and ATPase domains
MDESHHPAHAPALPSEPFAFLLHFFRHYYGWCVLVVVLEIGSSASSILTP
YAIGQIVGGVTDSLTVREQIFSAVAFPLGLYLLLNLGEVIFSRAGASCRI
VIAPRLRAQVTSELYAYLQHHSHRFLSNNFAGALASRISETSTSVNMTLW
TLVFDFLPIVVTLTVSIILLWYASIPLSLFTLVWALLYLSISYWLARRCR
PLAHKSAEARSITVGKVVDAVTNLASVRLFAMLGFERGYLESFLNNEIAA
SRRWLWSNEKILWFQFLLALTLKVGTLLFALWLWQQNQISVADFVMSVSL
SLLIIGEVRNISRRFIDLFEYIGNIANGVGIIVREHEIVDRPGAQPLHIT
RGCIELRGVTFGYSPDNPVFENLDLRIEGGQRVGLVGYSGSGKSTLLNLI
LRLYDPQQGSILIDGQDIRDVTQQSLHEQISLIPQDPGLFHRTLLENIRY
GRPGATREEIELAARGADAHEFIERMPNQYESLVGERGVKLSGGQRQRIS
IARVIAKNAPILIMDEATSSLDSITEQAIQNSLAALMKNKTVIVVAHRLS
TIAHLDRILVFNRGRIIEDGSHAQLLAVNGAYTQLWSRQADGFLVEETEQ
DD
>NE2036 acrD4, Acriflavin resistance protein
MTLPELSIKRHVLAWMVSGLLVLLGVISYQRIGVDRWPYIEFPMISVTTT
LIGANPDIVDASITSIIETAINTIPGIEHVQSSSSPSVSVTTITFSLDKN
IDVAYNEVQANISQVLRRLPDDTDPPVVRKIETNAQPVMWLSLQGDRTLQ
QLNLYGFNVIKKKLETIDGVGEVRLGGRRDRTIRVNILPERMASYNLAAS
DVISAFRREHIQLPGGFLVGRNTERLIKLDLEFHNLKDMSNLIVAYRDGA
PIRLKEIAEIEDELADYRQVARFNGQPSLGVGIVKVSNANTVAIIEEVER
RLKEDIVPSLPPGMRIGVSTSDAIFIKELVNSLQEHLIEGTLLAALIVWL
FLRSVRSTLIIATAIPVSLLGAVAVMYFSGFTFNTMTLLALLLLIGVVVD
DAIVVLESIFRHMSRDQARYGKVDTAAASVRGSHEVVFAVIAATLSLVCI
FAPVIFMDGIIGKFFKSFAVVVTFGVLISLLVSLTLTPMLCSRYLRVDRK
HGRLYHWLDNGFNRMDRIYGSLLEFSIQHRWKVILITTLTVLSSSFFFGK
VEKELSPEADEGVFMITFRTPLGSSIDYTDSRLKLIEGVLTSYPSEVASY
LGMIGAGQDGQVNRGFVNVRLYDRNDRTMTQKMLIRELRERFDKIPGVRA
FPAPVAIVRGQRPEKLQFNLTGPNLQEVGRLAKEMQRRLGEIPGMGKVDL
DLDLDLPQLVVDLDRTRAASLGISATDVAMAINMFTGGVDVARFSDEPGD
GQRYQIRIKGKENRFNQLEDLKKVYLRSTGNELVRLDTVAKFRDNLGAAV
IGRFDLQYAAMFYANPAFSLGNATDMVFQQAAEFMPVGYTVKMTGQAEEL
AKTMTNTLFIFTLALILLYMVLASQFNSFLQPLIVMVAQPLAIIGGIFAL
WLTGNSLNIFSMIGLVLLIGLVAKNSILLIDLTNQLREQGKSVDDALREA
CPVRLRPVLMTSLTVILALLPAAMGLGAGAETNRPLSIAVIGGMISSTLL
TLVVVPAVYSLVMQAVDKLHLSRHGSAD
>NE2182 ampD, N-acetylmuramoyl-L-alanine amidase (family 2)
MSMLIDAEGRLVPARYIPSPNCDERPDRNDISLLVIHAISLPPEEFGSDS
VIELFTNRLDPQAHPYYQGLQDLKVSSHFFIRRNGEIIQFVPCTLRAWHA
GISCWQERPRCNDFSIGIELEGSDNQPFELMQYNRLIELTRAIQAAYPVS
DIVGHADIAPQRKTDPGPYFDWQSYRQALETNR
>NE0039 bacA, Bacitracin resistance protein BacA
MDWLILLKALLLGIVEGLTEFLPISSTGHLILAGDLLNFNDDKAKVFTVA
IQLGAILAVCWEYRERLVNIIRNLGTRQANRFVINLFIAFLPAAILGLLF
IKTIKHYLFHPMPVAIALVTGGILILWAERREHRIEAETVDDMSWKQALQ
VGCAQCLALIPGTSRSGATIIGGLLFGLSRKAAAEFSFFLAIPVMFAATF
YDVYKHREFLYIDDLGMFATGSVAAFISALIAIRGFIRYISHHDFTLFAW
YRIGFGLIVLLTAYSGLVDWSVD
>NE0385 hsdM, hsdM; site-specific DNA-methyltransferase, type I modification
MKPIEQQFFNDLEKKLWTAADKLRSNLDAAVYKHVVLGLIFLKYVSDAFE
ERQRELREQFTNPQHDYYMDPEEYGGAGTPEYEDNIAAELEVRDYYTEKN
VFWVPVEARWQTLRDCAQLPPKAALPWNKPGKDEPEEMRSVGWLIDNAME
AIERENIRLKNVLNKDFARVQLDSSKLGELIALFSDTDFAAKTYKGQPLS
LQSRDILGHVYEYFLGQFALAEGKKGGQYYTPKSIVTLIVEMLQPFKGRV
YDPAMGSGGFFVQSEEFIGQHGGKAANGKSGQISVYGQESNPTTWRLAAM
NMAIRGIDFNFGSGPADTLLNDLHPDLRADFVMANPPFNMKEWWNEKLAN
DPRWIAGTPPQGNANFAWLQHMLWHLAPTGSMALLLANGSMSSNTNSEGE
IRKRLTEDDYVECMVALPGQLFTNTQIPACIWFLTRDKQNGFALDKKKRD
RRGEFLFIDARQMGYMKDRVLRDFTVDDIQKIADTFHAWQQGDGYEDVPG
FCKSASLEEVRKHEHVLTPGRYVGTAEQEEDGEPFADKMQRLTAQLAEQF
AESARLETEIRKNLAGLGYGW
>NE0382 hsdR, Restriction enzymes type I helicase subunits and related helicases
MITEQKLEDTAVGWFAELGWPHANGPEIAPDGDQPARTDYRQVVLREHLL
AALARINPHIPAAALEQAAHELLTVGEPLLIARNRRVHRLLLSGIPVEFS
VGDEKRSDLVNLIDFANPRNNDFLLVSQFTVRATRQPRRPDLVAFVNGLP
LVVIELKNPANEQTDIWDALNQIQTYKEEIGDLFNTNVAVVVSDGFTARL
GSLTANQERMQPWRAIANEDDRPLLEFELETLVRGFFEPALFLDYVRHFV
LFEQDADQIIKKIAGYHQFHAVREAVKATVIAASNPNKGLLEVQEPRATY
GKEVQPGSRKAGVVWHTQGSGKSITMACYAGKLLQQPEMKNPTLVVVTDR
NDLDGQLFATFCAAEDLLRQTPVQAGSREELREILASREAGGIIFTTVQK
FALLDDEEQHPLLSDRSNIVVISDEAHRSQYGMKGRLDTKTGKYVFGYAK
HMRDALANATFIGFTGTPIALEDKDTRAVFGDYVSIYDIQDAVDDGATVP
IFYESRLAKLDVNQAEIDALNAQVDEVIEDEEDITAREKTKSDWAALTKL
VGAQPRLEQVAADLVQHFETRTATLEGKVMIVCMSRDICAELYNATVALR
PDWHDADPEKGAIKVVMTGSAADKPLLQPHLYSQQVKKLLEKRFKDPADP
LKLVIVRDMWLTGFDAPCCHTMYVDKPMKGHNLMQAIARVNRVFRNKPGG
LVVDYIGIANELKAALKTYTESKGKGDPTHNAAEALAVLLEKLDIVRGLM
HGFDYRGFETDAMKLLVPVANHILGLKDGKQRFLDAMLAVSKAFSLCSTL
DETAALRTEIAFFAAVKAAIVKFTTVDRKRSDADKNSALKQILDNAIVAD
GVADIFALAGLDKPNIGLLSEEFLEDVRQMKNRNLAVELLEKLLSDEIKA
RARNNVVQEKKYGDRLLETLRKYHNRAVETAQIIEELIQMAKDFQAALER
EAALGLNPDEIAFYDALANNESAVRELGDDTLKKIAVEITEKLRNSTTVD
WQVRESVRAKLRILVRRTLQKWKYPPDKQLEAVELVLQQAEVLSNSWSK
>NE2499 hsdR, DEAD/DEAH box helicase
MSETEAQTRADLIDQQLALSGWNVKDPTQVIEEFDILTVLTEGVAEPRAP
YQGHQFSDYVLLGRDGKPLAVIEAKKTLRDAALGREQAKQYCYNIQKQLG
SELPFCFYTNGHELYFWDLENAPPRKVVGFPTRDDLERFAYIRRNRKPLT
QEFINTSIAGRDYQIRAIRSVLEGIEQKKRDFLLVMATGTGKTRTCIAMV
DALMRAGHAEKVLFLVDRIALREQALATFKEHLPNEPRWPNVGEKLIAMD
RRIYVATYPTMLNIIRDDAQHLSPHFFDFIVVDESHRSIYNTYGEILDYF
KTITLGLTATPTDIIDHNTFQLFHCEDGIPTFAYTYEEAVNNVPPYLCNF
QVMKIQTKFQMEGISKRTISLEDQKKLILQGKEVEDINFEGTQLERQVIN
NGTNTLIVREFMEEAIKDANGVLPGKTIFFCATKAHARRIEEIFDKLYPQ
YHGELAKVLVSDDPRVYGKGGLLDQFTNNDMPRIAISVDMLDTGIDVREI
VNLVFAKPVYSYTKFWQMVGRGTRLLETSKPKPWCLEKEVFLILDCWDNF
EYFKLNPKGKELKPQLPLPVRLVGLRLDKIEKANDSGHADIASREIAKLR
LQIAALPKESVVIKEAAAALARLDDDNFWISLSHDRLEFLRAEIKPLFRT
VSEADFKAMRFERDLLEYSLAVLNEDKEQAETIKEGIVEQISELPLSVSF
VKQEEALIRAAQTSHYWAKADEEAFDELVAKLGPLMKFREQSTGQEQTHL
DLADELHKKEWVEFGPQHEAVSISRYREMVEALITELTEHNPVLQKIKNG
EAVNSQESNELAELLHEEHPHITEDLLRQVYKNRKARFIQFIRHILGIEV
LQSFPDEVSAAFGQFIRAHTTLSSRQMEFLNLLKNFIIEREKVEKRDLIN
APFTVIHPQGIRGVFSPAEINEILQLTEGLVAS
>NE1056 lolD, lolD; lipoprotein releasing system ATP-binding ABC transporter
MSKIIIACRDLYKSYFQGNLEVPVLHGIDLQVNEGEMVAIVGASGSGKST
LLHVLGGLDKPTRGEVTLLDRELSTISEAERGSLRNHALGFVYQFHHLLP
EFSAQENVAMPLFIRRMNKKAAMEQAAAMLQRVGLGHRLTHTPGELSGGE
RQRAAVARALVTRPACVLADEPTGNLDRHTAEAVFDLMLELNHEANAGLV
IVTHDTQLASRADRVLHLVDGMLQ
>NE1117 yhiH, ATPase component ABC-type multidrug transport system
MSVDISTKPVIRVQNVNLRYGDTLALDALDVEIPAHCMAGLIGPDGVGKS
SLMSLLTGARVMQQGQIEVLGGDIADPAHRRVVCPRIAYMPQGLGRNLYH
TLSVFENIDFFGQLFGHEQIERHQRIDELLESTGLAPFRDRPAGKLSGGM
KQKLGLCCALIHDPDFLVLDEPTTGVDPLSRAQFWELISRLRTQHVNMSV
LVSTAYMDEAERFDWLAAMDAGKILATGTAAELRTRTDTDSLEAAFIRLL
PAEKRRGYREIIIPPRDIRDDQEIAIEAHDLTMRFGDFVAVDRVNLHISR
GEIFGFLGSNGCGKSTTMKMLTGLLPPSEGEAWLFGQVIDAGNLATRKRV
GYMSQAFSLYSELTVRQNLELHAKLFHLPDADIPARVTEMAERFLLEAVM
DSFPDALPLGMRQRLSLAVAVIHQPDLLILDEPTSGVDPIARDMFWELII
GLARRDQVTIFISTHFMNEAERCDRISLMHAGKILASDTPAALIERSGHS
TLEAAFISYLKQASGISDKPVKMPVPSTTQAQATVAPEETHAVMTLNTRF
SLLRLFSYTLREALELRRDPIRGSIALFGTVLLMFIMGYGISMDVENLRF
AVLDRDQTTLSRNYILDLSGSRYFIEQPPITDYGELDQRMRSGELSLALE
IPPNFARDLARGDNVRIGAWIDGAMPTRAENILGYVQAMHQNWLLEQARH
HATDHLPAGLMTIETRFRYNPDVKSLPAIVPAVIPMLLMLILAMLSALSV
VREKELGSILNLYVTPVTRLEFLLGKQLPYIALGMINFFLLCILAVFVFG
VPHKGDFLLLTVAALLYVTAATGLGLLVSAFTRSQIAAIFATSLATIIPS
SRFSGMIDPVSSLEGGARLVGEIFPATYFLTISRGTFSKALGFAELGSLL
LPLALAIPVITSLAVILLKKQER