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2024-05-05 19:24:55

Gene list

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COG category: Defense mechanisms
Organism: Ralstonia solanacearum GMI1000, GMI1000

Number of genes found: 47

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Ralstonia solanacearum GMI1000, GMI1000
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
RSc0164 PROBABLE ATP-BINDING ABC TRANSPORTER PROTEINchromosome CDS184299 966 + 0.701863
RSc0165 PROBABLE TRANSMEMBRANE PROTEINchromosome CDS185261 1146 + 0.660558
RSc1180 PROBABLE INNER MEMBRANE TRANSMEMBRANE PROTEINchromosome CDS1242552 1347 - 0.681515
RSc1452 PROBABLE TRANSMEMBRANE PROTEINchromosome CDS1553101 927 + 0.700108
RSc1654 PROBABLE TRANSMEMBRANE DRUG EFFLUX PROTEINchromosome CDS1778487 3120 + 0.666026
RSc1680 PROBABLE PHAGE PHI-105 HOLIN-LIKE PROTEINchromosome CDS1797957 375 + 0.688
RSc1765 PROBABLE 6-AMINOHEXANOATE-DIMER HYDROLASE LIPOPROTEINchromosome CDS1891963 1194 + 0.69933
RSc1796 PUTATIVE N-ACETYLMURAMOYL-L-ALANINE AMIDASE PROTEINchromosome CDS1931234 1032 - 0.612403
RSc1808 PROBABLE COMPOSITE ATP-BINDING TRANSMEMBRANE ABC TRANSPORTER PROTEINchromosome CDS1961077 1857 + 0.696284
RSc1809 PROBABLE COMPOSITE ATP-BINDING TRANSMEMBRANE ABC TRANSPORTER PROTEINchromosome CDS1962930 1746 + 0.710195
RSc1853 PROBABLE MULTIDRUG RESISTANCE TRANSMEMBRANE PROTEINchromosome CDS2035646 1158 - 0.69171
RSc1974 PROBABLE ATP-BINDING ABC TRANSPORTER PROTEINchromosome CDS2148369 966 + 0.690476
RSc1975 PUTATIVE TRANSMEMBRANE PERMEASE ABC TRANSPORTER PROTEINchromosome CDS2149355 825 + 0.665455
RSc2200 PROBABLE COMPOSITE ATP-BINDING TRANSMEMBRANE ABC TRANSPORTER PROTEINchromosome CDS2380939 1779 - 0.670039
RSc2726 PROBABLE MULTIDRUG RESISTANCE TRANSPORT TRANSMEMBRANE PROTEINchromosome CDS2931981 1167 + 0.716367
RSc2955 PROBABLE TRANSMEMBRANE PROTEINchromosome CDS3184160 789 - 0.651458
RSc2956 PROBABLE ATP-BINDING ABC TRANSPORTER PROTEINchromosome CDS3184945 966 - 0.672878
RSc3155 PUTATIVE ANTIBIOTIC HYDROLASE SIGNAL PEPTIDE PROTEINchromosome CDS3408633 1179 - 0.669211
RSc3205 PROBABLE TRANSMEMBRANE DRUG EFFLUX PROTEINchromosome CDS3464759 3123 - 0.621518
RSc3394 PUTATIVE RESTRICTION MODIFICATION ENZYME R SUBUNIT PROTEINchromosome CDS3660547 2865 - 0.700873
RSc3396 PROBABLE TYPE I RESTRICTION ENZYME M PROTEINchromosome CDS3664301 1446 - 0.700553
RSc3416 PROBABLE TRANSMEMBRANE PROTEINchromosome CDS3692511 846 + 0.665485
RSp0030 PROBABLE OXACILLIN HYDROLASE (CLASS-D BETA-LACTAMASE) SIGNAL PEPTIDE PROTEINmegaplasmid CDS34899 819 + 0.703297
RSp0135 PUTATIVE HYDROLASE TRANSMEMBRANE PROTEINmegaplasmid CDS156755 1050 - 0.707619
RSp0164 PROBABLE TRANSMEMBRANE PROTEINmegaplasmid CDS190739 1449 - 0.723948
RSp0264 CONSERVED HYPOTHETICAL PROTEINmegaplasmid CDS339666 351 + 0.706553
RSp0440 PUTATIVE MULTIDRUG RESISTANCE HOMOLOG TRANSMEMBRANE PROTEINmegaplasmid CDS551701 1092 - 0.703297
RSp0818 PROBABLE DRUG EFFLUX TRANSMEMBRANE PROTEINmegaplasmid CDS1031318 3162 - 0.676787
RSp1182 PUTATIVE COMPOSITE ATP-BINDING TRANSMEMBRANE ABC TRANSPORTER PROTEINmegaplasmid CDS1502255 2220 + 0.716667
RSp1198 PROBABLE DRUG EFFLUX PUMP TRANSMEMBRANE PROTEINmegaplasmid CDS1520570 3126 + 0.681702
RSp1199 PROBABLE DRUG EFFLUX TRANSMEMBRANE PROTEINmegaplasmid CDS1523692 3102 + 0.678594
RSp1213 PROBABLE TRANSMEMBRANE PROTEINmegaplasmid CDS1543535 1368 - 0.689327
RSp1458 PROBABLE TRANSPORTER TRANSMEMBRANE PROTEINmegaplasmid CDS1832864 3105 + 0.688245
RSp1464 PROBABLE ATP-BINDING ABC TRANSPORTER PROTEINmegaplasmid CDS1842828 783 + 0.730524
RSp1465 PROBABLE TRANSMEMBRANE PROTEINmegaplasmid CDS1843612 1263 + 0.721299
RSp1597 PROBABLE TRANSPORT TRANSMEMBRANE PROTEINmegaplasmid CDS2002192 3195 + 0.679812
RSp1603 HYPOTHETICAL TRANSMEMBRANE PROTEINmegaplasmid CDS2011063 1113 + 0.622642
YS02621 PROBABLE TRANSMEMBRANE MULTIDRUG-EFFLUX SYSTEM LIPOPROTEIN TRANSMEMBRANEmegaplasmid CDS1408202 3210 + 0.668536
acrB PUTATIVE ACRIFLAVIN RESISTANCE TRANSMEMBRANE PROTEINchromosome CDS8446 3150 - 0.65873
ampD PUTATIVE AMIDASE PROTEINchromosome CDS3018877 603 - 0.708126
bacA BACITRACIN RESISTANCE PUTATIVE UNDECAPRENOL KINASE TRANSMEMBRANE PROTEINchromosome CDS748286 882 + 0.64059
cyaB PROBABLE CYCLOLYSIN-TYPE SECRETION COMPOSITE ATP-BINDING TRANSMEMBRANE ABC TRANSPORTER PROTEINmegaplasmid CDS379620 2178 - 0.662534
dinF PROBABLE DNA-DAMAGE-INDUCIBLE F TRANSMEMBRANE PROTEINmegaplasmid CDS366465 1374 + 0.716885
emrA PROBABLE MULTIDRUG RESISTANCE A (TRANSLOCASE) TRANSMEMBRANE PROTEINchromosome CDS1377867 1287 - 0.714841
lolD PROBABLE LIPOPROTEIN RELEASING SYSTEM ATP-BINDING ABC TRANSPORTERchromosome CDS1175005 735 + 0.710204
mexD PROBABLE MULTIDRUG EFFLUX SYSTEM TRANSMEMBRANE PROTEINmegaplasmid CDS407966 3150 - 0.672063
nosF PROBABLE COPPER ATP-BINDING ABC TRANSPORTER PROTEINmegaplasmid CDS1726418 945 + 0.679365