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2024-05-19 02:30:29

Gene list

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COG category: Defense mechanisms
Organism: Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18

Number of genes found: 56

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Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
HCM1.182 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS134029 351 + 0.45584
HCM1.27c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS9003 525 - 0.485714
HCM2.0050c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM2 CDS37229 324 - 0.493827
HCM2.0092 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM2 CDS74068 246 + 0.52439
STY0168 AmpD protein (anhydro-N-acetylmuramyl-tripeptide amidase)SubName: Full=AmpD protein (Anhydro-N-acetylmuramyl-tripeptide amidase); SubName: Full=Anhydro-N-acetylmuramyl-tripeptide amidase; chromosome CDS172501 564 + 0.551418
STY0169 AmpE proteinSubName: Full=AmpE protein; chromosome CDS173061 855 + 0.554386
STY0194 hypothetical ABC transporter ATP-binding proteinSubName: Full=Hypothetical ABC transporter ATP-binding protein; chromosome CDS204369 927 + 0.499461
STY0195 ABC transporter integral membrane proteinSubName: Full=ABC transporter integral membrane protein; chromosome CDS205292 771 + 0.54345
STY0449 conserved hypothetical proteinRecName: Full=Uncharacterized protein YajD; chromosome CDS458765 348 + 0.494253
STY0504 putative ABC transporter ATP-binding membrane proteinSubName: Full=Putative ABC transporter ATP-binding membrane protein; chromosome CDS511391 1782 + 0.579125
STY0519 acriflavin resistance protein BSubName: Full=Acriflavin resistance protein B; chromosome CDS522109 3150 - 0.541905
STY0850 putative inner membrane proteinSubName: Full=Putative inner membrane protein; chromosome CDS843412 1107 - 0.529359
STY0851 putative inner membrane proteinSubName: Full=Putative inner membrane protein; chromosome CDS844634 1131 - 0.54023
STY0927 putative N-acetylmuramoyl-L-alanine amidaseSubName: Full=Putative N-acetylmuramoyl-L-alanine amidase; chromosome CDS917387 831 + 0.574007
STY0985 probable transport ATP-binding protein MsbARecName: Full=Lipid A export ATP-binding/permease protein MsbA; EC=3.6.3.-; chromosome CDS980946 1749 + 0.51801
STY1258 ABC transporter ATP-binding subunitRecName: Full=Lipoprotein-releasing system ATP-binding protein LolD; EC=3.6.3.-; chromosome CDS1213359 702 + 0.545584
STY1355 peptide transport system ATP-binding protein SapFSubName: Full=Peptide transport system ATP-binding protein SapF; chromosome CDS1316752 807 - 0.532838
STY1356 peptide transport system ATP-binding protein SapDSubName: Full=Peptide transport system ATP-binding protein SapD; chromosome CDS1317560 993 - 0.522659
STY1357 peptide transport system permease protein SapCRecName: Full=Peptide transport system permease protein SapC; chromosome CDS1318552 891 - 0.573513
STY1368 peptide transport system permease protein SapBRecName: Full=Peptide transport system permease protein SapB; chromosome CDS1323500 966 - 0.528986
STY1598 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1541402 303 - 0.60396
STY1680 putative HlyD-family proteinSubName: Full=Putative HlyD-family protein; chromosome CDS1607276 870 + 0.498851
STY1697 hypothetical integral membrane proteinRecName: Full=Multidrug resistance protein MdtK; AltName: Full=Multidrug-efflux transporter; chromosome CDS1623395 1374 + 0.537118
STY1928 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1820401 915 + 0.563934
STY2074 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1930637 1053 + 0.483381
STY2216 putative inner membrane proteinSubName: Full=Putative inner membrane protein; chromosome CDS2051109 1458 - 0.530864
STY2340 putative RND-family transporter proteinRecName: Full=Multidrug resistance protein MdtB; AltName: Full=Multidrug transporter MdtB; chromosome CDS2173488 3123 + 0.582453
STY2341 putative RND-family transporter proteinRecName: Full=Multidrug resistance protein MdtC; AltName: Full=Multidrug transporter MdtC; chromosome CDS2176611 3081 + 0.567673
STY2399 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS2232222 588 - 0.547619
STY2716 putative exported proteinRecName: Full=UPF0214 protein YfeW; Flags: Precursor; chromosome CDS2548075 1299 + 0.461894
STY2719 putative efflux pumpSubName: Full=Putative efflux pump; chromosome CDS2553752 3114 + 0.556519
STY2877 putative type I secretion protein, ATP-binding proteinSubName: Full=Putative type I secretion protein, ATP-binding protein; chromosome CDS2755839 2157 + 0.570236
STY2940 multidrug resistance protein ASubName: Full=Multidrug resistance protein A; chromosome CDS2814673 1173 + 0.546462
STY2981 transcriptional activator of the formate hydrogenlyase systemSubName: Full=Transcriptional activator of the formate hydrogenlyase system; chromosome CDS2856596 2079 + 0.547379
STY3384 bacitracin resistance protein (putative undecaprenol kinase)RecName: Full=Undecaprenyl-diphosphatase; EC=3.6.1.27; AltName: Full=Bacitracin resistance protein; AltName: Full=Undecaprenyl pyrophosphate phosphatase; chromosome CDS3228068 822 - 0.538929
STY3546 possible exported proteinRecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA; Short=pHBA efflux pump protein A; chromosome CDS3385571 933 - 0.563773
STY4224 hypothetical ABC transporter ATP-binding proteinSubName: Full=Hypothetical ABC transporter ATP-binding protein; chromosome CDS4090292 2742 + 0.578045
STY4434 putative DNA-damage-inducible membrane proteinSubName: Full=Putative DNA-damage-inducible membrane protein; chromosome CDS4305158 1326 + 0.569382
STY4460 putative type-1 secretion proteinSubName: Full=Putative type-1 secretion protein; chromosome CDS4344317 2067 + 0.352201
STY4561 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS4441532 570 + 0.521053
STY4592 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4467675 1950 + 0.545128
STY4853 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4716616 876 + 0.507991
STY4937 inner membrane protein CreDSubName: Full=Inner membrane protein CreD; chromosome CDS4798017 1350 + 0.526667
ampH penicillin-binding protein AmpHSubName: Full=Penicillin-binding protein AmpH; chromosome CDS420379 1158 - 0.535406
bla beta-lactamaseRecName: Full=Beta-lactamase TEM; EC=3.5.2.6; AltName: Full=Penicillinase; Flags: Precursor; pHCM1 CDS161911 861 + 0.491289
cat chloramphenicol acetyltransferaseRecName: Full=Chloramphenicol acetyltransferase; Short=CAT; EC=2.3.1.28; pHCM1 CDS154527 660 + 0.44697
hsdR subunit R of type I restriction-modification systemSubName: Full=Subunit R of type I restriction-modification system; EC=3.1.21.3; chromosome CDS4745128 3510 - 0.553561
hsdS subunit S of type I restriction-modification systemSubName: Full=Subunit S of type I restriction-modification system; chromosome CDS4741999 1389 - 0.425486
iroC putative ABC transporter proteinSubName: Full=Putative ABC transporter protein; chromosome CDS2770645 3657 + 0.589281
mdlA putative ABC transporter ATP-binding membrane proteinSubName: Full=Putative ABC transporter ATP-binding membrane protein; chromosome CDS509626 1773 + 0.555556
merC putative mercury transport proteinSubName: Full=Putative mercury transport protein; pHCM1 CDS115742 426 + 0.619718
mrr mrr restriction system proteinSubName: Full=Mrr restriction system protein; chromosome CDS4748835 915 + 0.527869
steD fimbrial subunitSubName: Full=Fimbrial subunit; chromosome CDS2953143 507 + 0.564103
strB streptomycin phosphotransferaseSubName: Full=Streptomycin phosphotransferase; pHCM1 CDS167667 837 + 0.55914
ybhF hypothetical ABC transporter ATP-binding proteinSubName: Full=Hypothetical ABC transporter ATP-binding protein; chromosome CDS845757 1737 - 0.559586
ybjZ conserved hypothetical ABC transporterRecName: Full=Macrolide export ATP-binding/permease protein MacB; EC=3.6.3.-; chromosome CDS931425 1947 + 0.543914