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# Dehalococcoides sp. CBDB1, CBDB1

>cbdbA789 ABC transporter, ATP-binding protein
MTGNAISLRDISFNYKHIKALDDLSLEIPGGISFGIMGPNGAGKTTLIRI
MVGLLRQKSGYLAILGKEFSRQLEYQLGYMPQAHSLYTELSISQNIDFFA
RVYGLRDKTLRKARIEEVIRLIDLWERRNDAVMNLSGGMKQRVSLACAIV
HNPPVIFLDEPTVGLDPELRCRFWEYFKSLNQKGVTIIISSHTLDDAAHC
DRLAFLREGKVIAEGTPADLKAATGKADASLEDAFLHSIRIGGIPCHE
>cbdbA133 ABC transporter, permease protein
MSIKHIITLFNREVIHGPKDVTFIMVVVTPILISLFISLAFGNIFSEKPK
LGLTDLGNSQIVNLLKENNTLLIKEYPDEAALKEAATSGAVDMGLVLPAD
FDTSLIQTNTLKANAYVWGESLAKSRMIIPAVLADTARQITGANVPVEIN
SISLGDEMNVPWADRLFPFVVLMAMFFSGLMLPASSLIDEKQKRTLEAVN
ITPATLGEIFTAKGAIGTLLGVVMGLIILALNSAFGNSPLPLILMLGLGS
LMASLLGLLAGAFIKDMNTLFAVWKFGGLLLFGPAFIYLFPQIPQWIGYF
FPTYYILKPVVDLSVYDAGWTDIALNAGISVILVVILLVAVSKVVSRMSN
SALRLYT
>cbdbA136 ABC transporter, ATP-binding protein
MSQISISVEKLSYWYGDLKAVNQISFEVAQGEILGFLGPNGAGKTTTQKM
LTGQLRPKDGRATLLGFDVAKDTEEIHRRIGICFEQTNLYEQMNALENLQ
LFADLFGVNNFNGYALLKRVGLAGREKDKVAGYSKGMKQRLMVARSLVNT
PSILFMDEPTSGLDPVSSESIRDIILEERKRGATIFLTTHDMWEADKLCD
RVAFINEGSIAALDAPVNLKQQYGKRSLIAKVKSANGQLENREIALDTGK
TAEEVSKLLSSERVLTLHSEEATLEDIFIKITGRRLTE
>cbdbA838 ABC transporter, permease protein
MKEILHYAWIEIIRRPARSIGNMLGYSLALAIAIVLFSVLSFSQDASASV
LNSTGTHFITYLPQCNSEACAVDLKDPLHEGFIANNTLSKVLSADIVSQI
TALDTVKDASPFILFRFYDKITDTYTLVAGFDPLNTTAVKTNCCSSEDII
TGEFLKPTDTGLVMLEESFALAETLPVGFRVDIGGQSFRVGSIINAGVRP
GKADIYMPITELRNLINTRLNTALPPDATNIILVESNGANVHYQAIDQVK
EIMGDRSLVSTYACSKPASTAMGIGENGIWLVSGILLISVIALALKSEYS
AVLERRRDIGILKAIGLSDSTILWQIVSQSVIQAVIGAVAGILLGVVLIY
TIPFASISGISSQDTLGVDWIVTLSAFGLAVTGGIAAGIIPALSAASMRP
AESLRGL
>cbdbA1289 ABC transporter, ATP-binding protein
MIEVNNLSKVFKDKTVLDNITFSVAPGEIFGFLGPNGAGKTTTMRIILGL
LNPSSGKATLNGKNLAKDDTARSNVGVLLEVDGIYDRLSAYENLRYFADI
YRIPNREARINELLEFFNLSERRNDPAGKFSKGMKRKLALAKAIMHKPEV
LFLDEPASGLDPEAQKSFRDLILSLSREGNMTIFLNSHDLDEVQRICNKV
AIIKGGKLLAWDSLTNLDRKNRQPGMELSFSNTADIEQAEKLLVSAKLAV
DIHRTQEGLTLTPAEGVDTPKIITYLSGHNIQLEEVRKLKRSLEEIYLET
MKQETK
>cbdbA791 ABC transporter, permease protein
MNNMLAIAQRLIRQLLHDRRTMALIIVVPVVVMGLIGVSFPDATVLDYIA
PAMLATLALFFSFLLTGISFLRETSQGTMERLMAAPVSRLDIVAGYLLGF
FVFALLQTLIIVLFTIYALGVNFQSELWQILLFQVLITTGAVTLGIFTSS
FAKNEFQMVQFIPLIIVPQIFLCGVIWPVSQMPEWLQYLSNILPLTYGVD
GMREIMLQGKNLAEVGFQCGVLMLFAVITTLLASLTVPKRR
>cbdbA839 ABC transporter, ATP-binding protein
MKKSRLEAINISRSFQKGTQSIPVLKEINLRAEPGEVVVIRGKSGAGKSV
LLWILSGLDNPDSGRVVFDGLELNSLGNSQRAELRRSRLGIIFQNFNLIG
SWTAYENVEIALRNSKLSPLEKSKRINRILSELGLSDRLQNLPAELSIGQ
QQRVAIARTLATNPELILADEPTGDVDPETGAEIIEMLLTPVKAGKAGLI
VATHGNFPLEIATRVYTLDNGVLIPFKLASTPHLQS
>cbdbA1715 ABC transporter, ATP-binding protein
MDAILCQKLTKKFGDFTALDGLDLAVEKNRVFGFLGPNGAGKTTAVRMLT
GLSQPTSGKAYVSGEEVTPRNLSLRSKIGFLPDVPAFYSWMTGREFMLFS
GELHKLSPRENNLRADELLELVDLSEAGKRRVGGYSRGMKQRLGIAQALV
NKPEVLFMDEPTSALDPMGRRDVLNLIERLSGDTTVFMSTHILSDVERVC
DRVAIINEGKLITSASVEELKRKYSTSAFEIQFEEEPTPILTQLLKMPYI
KTAEVRTEGEVRVLYVQASDLAKAKTEIPGVIAQSGLTLTHYELTTPSIE
DVFIQLVGNGAKA
>cbdbA104 putative type I restriction-modification system methylation subunit
MARNITVRPFRRLTQAELDAFLEKAANILRGNVDHSEFRGYVFALLFFKR
ISDVYIEEVRKLTAQLGDETLAKDPKMHNFVVPDGSLWDIAARQSRNQVG
TTLNEAMIAIERANQPKFDGILTSGVDFNDAEKLPRDKLINLINHFSSQI
FDRAHVTDDVLGNAYEYLIRNFASRAGKSSGEFYTPKEVAYLMSEIVEPQ
PGQSICDWASGSGGLLLQCRNYVTRQCKDPDRLLLYAQESNLSTYNISRI
NMILHGVKSWEHRHQDSLRNPLHVDDGKKLLKFDRIVMNPPFSLEDWGYD
DFQGGDPFGRFGYGMPPRNNGDYAWLEHVLKSLKDTGKAIVVMSQGVLFR
GQPEQTEEDDGRNQSADAEYVIREGFIKADAIECVIVLPSKLFYGNTVPG
CLIIMNKNKPPERKNKILMIWASRNFQNANPQNILRPSDLMRILVPWRAF
GDLDLARRLVSIHEEKLVQEEELERQRRLKDIEDAYAPILEPLETLTLEL
SRLETSNWQSNGYSRKSEQVIRIRELKRSVKELGKIQGERNAAEDEVNSH
ANQEIAHIHEAATDLLSICSDPNLANRYFSVVDINELSPNEYNLNMSRYV
DTYDEREEYIPLPDAANLLQESERRRSEAMRRVSLALGACNYDEV
>cbdbA486 putative daunorubicin resistance ABC transporter, ATP-binding protein
MAATSKAQPDIPAIETLDLSRSYGQLLAVDKLNLNIRKGELFALLGPNGA
GKSTTINMLCCLLKPTSGTARVMGFDINTQGYQVKSIIGSSPQETAISDH
LTPVENLGLFGKLNHIDPAKLKEWIPRFLEIMGLEDRAKSQVHTFSGGMK
RRLSIMMALIHNPDVVFLDEPTLGLDPQVRHAMWEYIESLKGKKTILLTT
HYMEEADHLADRIGIMDQGRIVALGTPVELKQSLIKEPTMRVQAFNISQR
MVADLKNFYPKVEFSGGTLSISAEHLEFNEIVNRLQNAGATIRSAQIKDP
SLEDVYLKLTGKELRE
>cbdbA105 putative type I restriction enzyme, specificity protein
MTKFSRQEYIIYDLPLLSYAASCKWPVKTVGDIAKVIGGGTPDTGVPQYW
NPAEIPWATPTDITSCKGIYINKTERNISQMGLQSCSATLLPQNSCLLTS
RATIGECRINTIPMATNQGFAALVPKAGTNSYFLFYLTYLLKPTFVRLAA
GTTYTEISKRELRRVKCRVPETEEEQAKIANVIKAVDDALACTPDESLML
MRTSLVQNLMTGKVYLKPEASK
>cbdbA1086 ABC transporter, ATP-binding/permease protein
MWKLIKSLKPFTWSIILIFTLLLGQAMSDLSLPDLMSRIINVGIQQQGIE
NATPSAIRSSEMNRILLFVDSADKASVTGYYTLLDKDLLSPADYNQYIES
YPGLANESIYKLNTNDENAANRLNSILSVPILMVSYIESGAATDILGSQF
DLPDGADIFSVLASLPQEQLDAIIQSAASHLSAIPESMVAQSDVSYLATE
YQAIGIDLNQMQMNYMVKIGGLMLLLTLVSVTFSVAVGFLAARVAAGFGR
DTRRKVFTKVESYSNSEFDKFSTASLITRSTNDIQQIQMILVMLLRIVFY
APIMGVGGIIKALGQDVSMSWIIASAVMAILAMIGVIFVVAIPKFRIIQK
FVDKLNLVTREMLSGLMVVRAFNKQQLEENKFEKANIDLTKTTLFINRVM
VFMMPAMMLIMNGVGVLIIWVGAHQIDAGAMQVGNMMAFMQYSMQIIMAF
LMVSMVFVMMPRATVSAQRIAEVLETEPGIEDPKKPVSFDTNIRGKVEFQ
NVGFKYPGADDYVLKDISFATKLGQTTAIVGGTGSGKSTLVNLIPRFYDI
TEGQILIDNTNIRNVTQHDLRDKIGYIPQKTNLFSGTIESNIAYGNENAD
ADTLKKAARIAQLTEYIDTTENGFNTPISQGGANISGGQKQRMAIARAVA
KQPEIYIFDDSFSAIDFKTDATLRKALKKETHNATVLIVAQRINTVMNAE
QIIVLENGMIVGKGTHKELMENCTVYRELALSQLSMEELSA
>cbdbA511 HNH endonuclease domain protein
MDNHQVLVLNQDYQPLNVCHIRRAVLLVYQSKAEMLEDGLGFWHSEKDHF
ALPSVIRLSCLIKHPPLRPKLNRAEIFSRDKHTCQYCGRKDLELTIDHVN
PKHQGGPHVWENVVAACLHCNRHKAGRTPEQAHMKLMCTPGVPQYRYGYS
LPRANANIRHEWRPYLGLGDEPKLVV
>cbdbA773 ABC transporter, ATP-binding protein
MVIQVQNLVKVYGSIRAVDGISFEVKKGEVFGMLGPNGAGKTTTAEIIEG
LRDADSGSVSVMGLDVRKQRDQIKQLIGIQLQAPALLPLLNVEEILKLFT
SFYRNSVPVEKLLDMVSLTESRKVLSKNLSGGQQQRLSVAMAMVNNPEIT
FLDEPTTGLDPQARRGLWSVIEELRSQGKTVFLTTHYMDEAERLCDRIAV
VDHGKIIALDTPKKLISGNFKESAIEFEMEPVPSGELLGSFPCVTSASVE
GFEVILYSNNVPKTMGAILDYADKNRGNTELRNLHVRQATLEDVFLKLTG
RKIRE
>cbdbA1614 putative integral membrane efflux protein
MWHITKWALRSRLVTILLALAVAGASLWAFMGIKVELMPDISLPYTTVVT
VYPQATPDAVVRDVTTPIERFVWDEWADKGLKHLTSTSSEGMSVIMAEFE
YGTDMNAVGESLNEGISKISFPQAVTNFAAMMGANAKNPQIIPINMNIMP
MVSLSLSGDLPPDQLKQIADSQIVPLLSQLDGVLRVDTEGGEKDYLVISP
DPAKMTQYGITISQIAGILGTNYSSLSDIEQISLGGDDIKLSDIATISLS
PSPSSAITRTNGKPSVGISVVKTESANTVETANAINEKIAELQGTLGDGV
TISTVFDQSDFIGTSISQLEEKAIVGGILAVLVVFFFLWAVRASLIAAIS
IPLSIFFGFLCMSLFGITLNILTLSAMTIAVGRLIDDSIVIIEVIYRRLR
AGESFKEAAIGGAKEVATPITTATLATVAIFAPLMFVGGIVGEMFVPFAL
TVTFAMLASLIVALTLIPALSKWLVSSKQKVVIAKDNWYQKVYIKALKWT
LGHRLAVVATAVLLLIGSAGLLPMAGTSFMSGSFGEETISISISLPATAD
VSATSALTAKVEALLGANPSVRSYSSTIGTSATSMAGIMSASQGGGGANT
ASIIVYLNSDADLQTELSNITLASQGITTDGVIQVSSGSGDSMGGSISSS
SINLSIQGQNREEIASITAQLLEMLKGVDGLEELKSDLTTVVPVLNIAVD
PAKVATSGLSPAQLAQLQQEFVLLMNGGALPGTTITLGSGSYPVYFKGIA
GRLSDAEQAKNLKIGFPVSVTLNDIAFVGVVAEPSHVSHTDTMLSATITG
LITEANVGAVNAAVQEQVDALPSHPGVKVVTAGIAEQMGDTFIQMGIAIL
VAIAIVFLIVILMMRSIRNPLLIMLSIPLAFIGSMLALVVTGYTLGVSAL
MGMLMLVGIVLTNAIVLVSMVEQQRKHGLSVKDALIEGGKIRLRPIVMTA
LTTILAMIPMALSVSSGTMLSAELAIVVIGGMISSTFLTLFVIPAVYSMV
YRGK
>cbdbA106 restriction enzymes type I helicase subunit
MTFTEYKTVEKEILDCLQTAELGWRYEPGDEVTLKYRGGDEQEMLLIPIL
REKLKELNHGVITDDERANIIIQKLRALKDNQEWIKWIRGEKTYKFSQDE
PSRNINLIDYTGVGNNDFLASNQVWIQGIEHRRPDILLFVNGIPVVDIEA
KTASHGHIDWAEGAKQTGRYDKEIPNLYYSNCFCAGVNELRMKYGIPGER
LQYWQQWRDPYPHTHIPSFDEMKCTIYGLFDRTNLLDIIQNFIVFETEQS
KTIKKIARYQQFRAANKIVARALNLDQESGQRRGIVWHTQGSGKSLTMLF
AARKLWNDSKLKQPTIIIVVDREQLQDQMIGELFKTNSENVAVAVSIQDL
RRLVAEGDGYRGIIVTIVNKFEGMQIEISKRANIVMLVDEAHRTQYGDLG
IFMRSAMPNASLFGLTGTPLELDDRNTPRAFGRKLGEDRFERYMDRYSIE
DSLRDGATRPIHYEVRATDWTVAYTDLDKKFEALFADRSPEERKALMGEA
KLDAILKHPKRIAQVANDIANHFIEHIRPNGFKAMVVCRDKEMCALYKTA
LDQLLAPEVSLIIISEDPTHDVDSIKPYYLGDTQRRNAVDDFKNPAPKSQ
EERDNPDNRFKRVEILIVCDMLLTGFDAPILQVMYLDKSMRDHTLLQAIA
RVNRPYSELKEFGLILDYFGMFEKLNDALNYDKNELGEVAFPYGKFRDMF
RTNITELLDLFIGIPHDGSHQSAMRVLIMLNDNDEKREQFEKLFRNVRVL
FETLQPDEFLRDFLYDYEWLCKLYMIYLKKFYPAEHFEISEEDGAKTRQL
IREHVDVKEIEEEFPTYKLDENYLTKIKDMNPNAKALDIEAMLDAEIRIR
LDEDEDVRPLSERLKHIIEQKRAGTLAGITLLKELEDLTKQVVDVIQETQ
RPVVDSIAKEVAKRVPNIPQGEAMAVAQAIIAKAKEKCFENWFLQNYMDT
ELYREFTILLATQFKNLQLHGAGKDFVERCIRLLKKARFAGKDK
>cbdbA1612 ABC-transporter, ATPase and permease component
MFMIHSYYSRINGNSPDEKPKITRGLLKRVWSYARPYRWLVLWMLLLTLA
TTGLGLLTPLILRDLIDTTLPNKDLTRLSWLIAALLTIPLLTSFLNVVLR
RYNSRVGEGVISDLRLAMFSHLQRMSLSFFTHTKSGELMSRLNNDVIGAQ
TAISNTFVSIVTSLIQAVVVFSVMVTLEWRLALVSVAILPLFFWAAHHLG
NRLRDIARNQLDLNARMNAVAQELLNISGALLVKLFGRSSEEDRRFKQRS
EEVRNIGIKRAVTGSLFFASIGLLSAIGIALVYGVGGYFVIQETLTIGTI
VALGVYLTTLYGALQTLTNAPVDFATSMVSFERVFEVLDVPLDIKEKENA
RILGKVRGVLEFKDVLFHYEREEKGLLREVRRFGQMEDVVSVLSGAGGAP
RNGGEKDAAGAERTNGEVLEHISFRAEPGQLVALVGPSGAGKTTLTYLIP
RLYDPVAGQILIDGHDLMDVTLDSLAAQIGMVTQETYLFHDTVRTNLLYG
RPDATQTEVETAAKAANIHKFVKGLPQGYETIVGERGYRLSGGEKQRLAL
ARVILKNPRILVLDEATSSLDSQSEYLIQEALKHVMVGRTSIVIAHRLST
ILAADIILVLDHGHIVERGTHSELLALGGLYANLYETQFRGKMNNLSSAE
>cbdbA914 hypothetical protein
MSYCPKCGNAMSDDDLFCKSCGAKQEKMQLTEDKTVITQPAAVEQIAPKT
PMGETGVSSFSNGASVWSPAPQKKKTNMPVTLLSAFLALAIISTGFLGYK
YIDDSNTIDTQQETISGLNADKTGLQSDLAAAQSTIQDVNNQLSLSEAQL
ATTEDELSAIQAKYPLRNFESLNKLQLWASSHKQTEYSYADDQYATALRV
QKAAMEDGYLVSACISWGHADGYSYILCEAMVGTTVYYWFPETGIVQSYM
TDIPVD
>cbdbA1087 ABC transporter, ATP-binding/permease protein
MSQNRNNPQSRMPVSGGPMGGGMHMGGGPMGGMRMAHSGEKARNFKDTMT
SLLKYLTPYRFTLIIALVLAIFGTVFTIIGPKLLGNATTKLFEGLVSKVM
NAPGAGIDFTYIGNIVLILIGLYAVSAICSYIMGYIMTGVSIKVTYDLRK
QIAEKINRLPMKFFDNKTYGEVLSHVTNDVDLISNTLTQSMSQMVTSVVT
ILGVLVMMFTINWIMALASLIIVPVSIGLISLIVGRSQKYFRKQQDYLGH
INGHVEEMYSAHNVMKAFNGEEKSITKFEGLNEELYGASWKSQFLSSIMM
PMMNFIGNLSYVVVCILGGFLAIQKTIQVGDILAFVQYVRSFTQPLAQTA
NIVNILQSTAAAAERIFEFLGEGEEVPEPANPVSLKDISGAVSFKDVSFG
YSPTKVIIKNFNADIKPGQRVAIVGPTGAGKTTMVKLLMRFYDVNSGAIL
VDGINIQDIKRQEYRSAFGMVLQDTWLFNGSIMDNIRFGKLDATDDEVYT
AAKTAYVDHFIHTLPNGYEMVMNEESSNISQGQKQLLTIARAVLANPKIL
ILDEATSSVDTRTEMLIQQAMENLMQGRTAFIIAHRLSTIRNADIILVMK
DGAIVEQGNHKELLEANGFYASLYNSQFESGLIENN
>cbdbA774 ABC transporter, permease protein
MNSFISMLNANFKQFLRDKTALFFTLAFPVLFIIMFGLVFSGTDKISYDV
ALVNEDNSQISQGITEAFSQVTIFSVKDSPRDESLQLLKDGKLKAVIIIP
EGLGIAALSGQTTDIQVYYDGSQTNVNQILMPVIKEILQTINREITQTPV
LFQISEETIQTKDMSMMSFFIPGVLAMSIMFLGLYSAMPLIQQREKKILK
RLGASPISRSTIIFSQVVLRLGLAVLQTIIIIVIGQLMFGVEILGNWWLL
LGLVMLGTLSFISLGFLVASLAKTEEGAMPIVQLIQFPMMFLSGIFFPLE
FMPDFMRPVVNALPLTYLGDAFRQVMVDGAPAFPLGVDLLVVTGWLVVCM
AVSIRFFRWE
>cbdbA485 ABC transporter, permease protein
MRFWELGIRALKETYRDPMALGFLLGFPLMFMLLFGFAFSGGGSASYQIG
VVDNDQTPLSSAFADEALSEVPSYEIIYINTPEEALTQLKQSDIRAYIII
PAGFGQEVSKLWAGTGGNIYLDVTYDESDIQAASEILSQLNVVTRAFAKI
EIPLNVNAQPVNIENKITNIDFISPGIIVFGLLILIPTSARIIVRDKEKG
FMSRMLTTPSRPVDFILGYSLSMTLICIIQIIFFMLLGYLFGMDIMGNIA
LAFLIFFLTGLSSIGIGMVIAGFSKSENQSESISWFFSMPLAIVSGTWFS
IQFMPDILKGLGYAFPYSHAIETSRLVILRGADFSAVNGEVGILAIWTVA
VFALGTIIFGRTMRS
>cbdbA134 ABC transporter, permease protein
MNFSVIKALLKKDFSLFLQNRFYMLMTIVGLVFYIIIFFIMPNKVDEQLK
AGIYAPVMPPAFSILVADPASSLTSYASLEEAKAAVENGDSQVAIVLPAD
IMQTWASGGKPEVEIYYASSAPIELRDAVISLVKELSYIQTGQSLTFDTN
EQVMGQDMLGEQIPMRNRMVPLLAIFILMMEILSLASLIAEENEQGTARA
LLVTPMTVPELFAAKGIIGVGMALGQVVLFMLLVGGFNSQPLITLGVLLL
GSLMVTGLGFLLASLTKSLMSVTAWGMLLFIILAIPGMGIMFPGLISSWA
KVIPSYYLTDTVNRVVNYGADLSVVGGNLLILVGFTAVIVTAGIVVLRRR
YQ
>cbdbA362 nodI, ABC transporter, ATP-binding protein
MNTHAIKVSNLVKRYKDCTALDGLSLEIEQGECFGLLGPNGAGKTTLVRI
LTSLSPSDSGKVEVMGLDLSHHLRQIKAMFGVIPQLDNLDAELSVTENLV
TFARFFDIKPADARQRAADILKLFKLEQKANSEVKALSGGMRRRLLLARG
LINNPSIIILDEPSVGLDPQSKYLVWQKLKEFKANGITQLLTTQNMDEAA
VLCDRIAIMHQGKVLDMDTPKGLVDRHVGQCLIEIEVRSGEHETITAECI
RRGLDFEDSGLIIQVFRCGEDNLLDELKALGWNVWQRIGTLEDVFLRLTG
KGLVE
>cbdbA363 nodJ, ABC transporter, permease protein
MNWPTYRAFYMWLRNYNVFIRLFWSIAPGFVIEPVVLLVALGFGFGSFIG
DINGQPYMEFIIPGVIASYAMTSATFECTYNVFFRMDYRKTYDSILATPM
NVSDVVTGEVLWGATRSIITACIILLVAALFGIIHSPWALLAPIFAVLEG
IMFASIGIFFASIVPSIYSFNYYFTLFIGPMTFFSGAFFPVSSFPEAVQV
ISNVVPLTPAVSLIRGAVSGDFSGVNVVISLLAVIGVSAAFYIATLFSMK
RRVME