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2024-05-18 09:51:54

Gene list

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COG category: Intracellular trafficking and secretion
Genomic element: chromosome

Number of genes found: 137

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Xanthomonas campestris pv. vesicatoria, 85-10
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA XCV2824 putative MarC transporter family proteinchromosome CDS3215329 600 - 0.648333
NA XCV4312 type II secretory pathway ATPasechromosome CDS4955334 1815 + 0.686501
NA XCV2608 type IV secretion system VirJ-like proteinchromosome CDS2940503 1263 - 0.665875
NA XCV2518 putative secreted proteinchromosome CDS2842773 438 - 0.625571
NA XCV4127 TolB-like proteinchromosome CDS4722294 882 + 0.698413
NA XCV1587 putative secreted proteinchromosome CDS1793815 531 - 0.642185
NA XCV2874 putative membrane proteinchromosome CDS3265682 2085 - 0.701199
NA XCV2815 Tfp pilus adhesinchromosome CDS3202185 3747 - 0.554844
NA XCV3650 putative glycosyltransferasechromosome CDS4202110 1908 - 0.631027
NA XCV1424 type IV secretion system VirJ-like proteinchromosome CDS1601470 1374 + 0.677584
NA XCV0608 putative lipasechromosome CDS687313 1323 + 0.640212
NA XCV3563 conserved hypothetical proteinchromosome CDS4080384 1350 + 0.583704
NA XCV3068 Tfp pilus assembly protein, putative ATPasechromosome CDS3492349 1038 - 0.618497
NA XCV2821 putative type IV pilus assembly protein FimTchromosome CDS3209341 519 - 0.581888
NA XCV3407 putative secreted proteinchromosome CDS3895392 1032 + 0.531008
NA XCV2454 putative membrane proteinchromosome CDS2784636 330 - 0.572727
NA XCV3928 DNA processing chain Achromosome CDS4508709 1146 + 0.696335
NA XCV4204 hemolysin activator proteinchromosome CDS4823183 1683 - 0.687463
NA XCV2367 conserved hypothetical proteinchromosome CDS2695658 2868 - 0.661785
NA XCV3197 putative membrane proteinchromosome CDS3635474 693 - 0.676768
NA XCV3730 Tfp pilus assembly proteinchromosome CDS4311406 1134 + 0.628748
NA XCV2068 putative secreted proteinchromosome CDS2358151 789 + 0.637516
NA XCV3574 putative regulatory proteinchromosome CDS4095912 2466 - 0.656123
NA XCV1152 Tfp pilus assembly proteinchromosome CDS1280994 354 + 0.641243
NA XCV3560 conserved hypothetical proteinchromosome CDS4076327 1350 + 0.601481
NA XCV2813 putative type IV pilus assembly protein FimTchromosome CDS3201019 543 + 0.618785
NA XCV2819 PilW-related proteinchromosome CDS3207702 1158 - 0.585492
NA XCV2036 Negative regulator of flagellin synthesischromosome CDS2317913 312 + 0.628205
NA XCV3930 PilA-related fimbrial proteinchromosome CDS4510411 726 + 0.676309
clpP XCV1081 ATP-dependent Clp proteasechromosome CDS1213748 627 + 0.626794
czcC XCV4261 outer membrane efflux proteinchromosome CDS4893493 1272 - 0.718553
exbB1 XCV0009 biopolymer transport ExbB proteinchromosome CDS11692 762 + 0.645669
exbB2 XCV2252 biopolymer transport ExbB proteinchromosome CDS2584100 552 + 0.653986
exbD1 XCV0010 biopolymer transport ExbD proteinchromosome CDS12500 423 + 0.600473
exbD2 XCV0011 biopolymer transport ExbD proteinchromosome CDS12926 414 + 0.596618
exbD3 XCV0012 biopolymer transport ExbD proteinchromosome CDS13586 408 + 0.615196
exbD4 XCV2253 biopolymer transport ExbD proteinchromosome CDS2584655 465 + 0.64086
ffh XCV1338 Signal recognition particle proteinchromosome CDS1504697 1377 + 0.663036
fhaB1 XCV1860 filamentous hemagglutinin-related proteinchromosome CDS2096009 1620 + 0.648148
fhaB2 XCV1861 filamentous hemagglutinin-related proteinchromosome CDS2097680 11130 + 0.64133
fhaC XCV1859 HlyB family outer membrane activator proteinchromosome CDS2094268 1701 + 0.64903
flhA XCV1980 flagellar biosynthesis pathway component FlhAchromosome CDS2255442 2094 - 0.678606
flhB XCV1981 flagellar biosynthesis pathway component FlhBchromosome CDS2257532 1131 - 0.648099
fliE XCV1999 flagellar hook-basal body complex protein FliEchromosome CDS2279378 372 - 0.66129
fliF XCV1998 flagellar biosynthesis lipoprotein FliFchromosome CDS2277640 1725 - 0.671884
fliH XCV1996 flagellar biosynthesis/type III secretory pathway protein FliHchromosome CDS2276023 621 - 0.711755
fliI XCV1995 flagellar biosynthesis/type III secretory pathway ATPase FliIchromosome CDS2274650 1377 - 0.705882
fliJ XCV1994 flagellar biosynthesis chaperone FliJchromosome CDS2274191 456 - 0.666667
fliN XCV1990 flagellar motor switch/type III secretory pathway protein FliNchromosome CDS2270826 339 - 0.660767
fliP XCV1988 flagellar biosynthesis pathway component FliPchromosome CDS2269575 846 - 0.647754
fliQ XCV1987 flagellar biosynthesis pathway component FliQchromosome CDS2268413 270 - 0.644444
fliR XCV1986 flagellar biosynthesis pathway component FliRchromosome CDS2267608 792 - 0.669192
fliS XCV2020 flagellin-specific chaperone FliSchromosome CDS2300549 414 - 0.640097
ftsY XCV2750 cell division protein FtsYchromosome CDS3130305 1656 + 0.693237
hrcC XCV0435 HrcC proteinchromosome CDS483229 1824 + 0.641996
hrcJ XCV0429 HrcJ proteinchromosome CDS478416 762 + 0.635171
hrcL XCV0431 HrcL proteinchromosome CDS479799 702 + 0.69943
hrcN XCV0432 HrcN proteinchromosome CDS480490 1329 + 0.668172
hrcQ XCV0423 HrcQ proteinchromosome CDS472630 915 - 0.659016
hrcR XCV0422 HrcR proteinchromosome CDS471999 645 - 0.596899
hrcS XCV0421 HrcS proteinchromosome CDS471734 261 - 0.636015
hrcT XCV0434 HrcT proteinchromosome CDS482317 831 + 0.614922
hrcU XCV0426 HrcU proteinchromosome CDS476245 1074 - 0.611732
hrcV XCV0425 HrcV proteinchromosome CDS474314 1923 - 0.621945
lepB XCV1374 Signal peptidase Ichromosome CDS1555340 801 + 0.616729
lspA XCV1291 lipoprotein signal peptidasechromosome CDS1449436 519 + 0.645472
oprN1 XCV0338 outer membrane efflux proteinchromosome CDS388094 1452 + 0.65427
oprN12 XCV4406 outer membrane efflux proteinchromosome CDS5079418 1461 + 0.70705
oprN2 XCV0463 outer membrane efflux proteinchromosome CDS522714 1509 - 0.692512
oprN3 XCV1500 outer membrane efflux proteinchromosome CDS1690647 1434 + 0.69735
oprN4 XCV1543 outer membrane efflux proteinchromosome CDS1742523 1425 + 0.680702
oprN5 XCV1569 outer membrane efflux proteinchromosome CDS1769307 1404 - 0.668091
oprN6 XCV2106 outer membrane efflux proteinchromosome CDS2411591 1485 - 0.695623
oprN7 XCV2651 outer membrane efflux proteinchromosome CDS2986087 1491 - 0.696848
oprN8 XCV2963 outer membrane efflux proteinchromosome CDS3368695 1470 - 0.668707
oprN9 XCV3002 outer membrane efflux proteinchromosome CDS3412546 1506 - 0.661355
papC XCV1482 PapC family outer membrane usher proteinchromosome CDS1665484 2415 - 0.680331
papD1 XCV1480 pili assembly chaperonechromosome CDS1663344 726 - 0.69146
papD2 XCV1483 pili assembly chaperonechromosome CDS1667852 771 - 0.67834
pilA XCV3353 Tfp pilus assembly protein major pilinchromosome CDS3840484 429 - 0.592075
pilB XCV3352 Tfp pilus assembly pathway ATPase PilBchromosome CDS3838617 1734 - 0.618224
pilC XCV3354 Fimbrial assembly proteinchromosome CDS3841254 1263 + 0.504355
pilD XCV3355 type II secretory pathway prepilin signal peptidasechromosome CDS3842523 864 + 0.641204
pilE XCV2814 type IV pilin PilEchromosome CDS3201745 408 - 0.553922
pilM XCV3501 Tfp pilus assembly proteinchromosome CDS4011958 1059 - 0.629839
pilN XCV3500 Tfp pilus assembly proteinchromosome CDS4011176 783 - 0.641124
pilO XCV3499 Fimbrial assembly membrane proteinchromosome CDS4010514 666 - 0.603604
pilP XCV3498 Tfp pilus assembly proteinchromosome CDS4009984 534 - 0.632959
pilQ XCV3497 fimbrial assembly proteinchromosome CDS4008015 1950 - 0.598974
pilU XCV3067 Tfp pilus assembly protein ATPasechromosome CDS3491106 1131 - 0.616269
raxC XCV3591 outer membrane efflux protein RaxCchromosome CDS4123846 1383 + 0.652928
secA XCV0839 preprotein translocase subunit SecAchromosome CDS956045 2820 + 0.630142
secB XCV0206 preprotein translocase subunit SecBchromosome CDS241429 513 + 0.637427
secD XCV2693 preprotein translocase subunit SecDchromosome CDS3049133 1845 - 0.64065
secE XCV0985 preprotein translocase subunit SecEchromosome CDS1116319 408 + 0.583333
secF XCV2692 preprotein translocase subunit SecFchromosome CDS3048075 969 - 0.613003
secG XCV2854 preprotein translocase subunit SecGchromosome CDS3246903 474 - 0.677215
secY XCV1019 preprotein translocase subunit SecYchromosome CDS1144961 1365 + 0.622711
sppA XCV3938 protease IVchromosome CDS4519167 1902 - 0.662986
tatA XCV4321 Sec-independent protein translocase TatAchromosome CDS4969936 228 - 0.649123
tatB XCV4320 Sec-independent protein translocase TatBchromosome CDS4969294 627 - 0.669856
tatC XCV4319 Sec-independent protein translocase TatCchromosome CDS4968560 738 - 0.632791
tolB XCV3272 biopolymer transport TolB proteinchromosome CDS3738550 1320 - 0.657576
tolQ XCV3275 biopolymer transport TolQ proteinchromosome CDS3741695 780 - 0.653846
tolR XCV3274 biopolymer transport TolR proteinchromosome CDS3741088 450 - 0.626667
trbJ XCV2159 conjugal transfer proteinchromosome CDS2481727 642 + 0.623053
trbL XCV2161 conjugal transfer protein TrbLchromosome CDS2482658 1650 + 0.653333
virB6 XCV3558 type IV secretion system protein VirB6chromosome CDS4073539 1119 + 0.61126
virB6 XCV3390 type IV secretion system protein VirB6chromosome CDS3875732 1137 - 0.562885
virB6 XCV3561 type IV secretion system protein VirB6chromosome CDS4077679 1185 + 0.583122
virB6 XCV3564 type IV secretion system protein VirB6chromosome CDS4081738 1173 + 0.597613
virB8 XCV2808 type IV secretion system protein VirB8chromosome CDS3194231 1017 - 0.533923
virB9 XCV2807 type IV secretion system protein VirB9chromosome CDS3193467 768 - 0.44401
virD4 XCV2810 type IV secretion system protein VirD4chromosome CDS3196116 1674 - 0.596774
xadA1 XCV3670 Xanthomonas adhesin XadAchromosome CDS4226603 7074 - 0.687588
xadA2 XCV3672 Xanthomonas adhesin XadAchromosome CDS4236201 3198 - 0.679487
xcsD XCV0756 type II secretory pathway protein Dchromosome CDS863528 2070 + 0.66715
xcsE XCV0757 type II secretory pathway ATPasechromosome CDS865602 1488 + 0.660618
xcsF XCV0758 type II secretion system protein Fchromosome CDS867076 1203 + 0.671654
xcsG XCV0759 type II secretory pathway pseudopilinchromosome CDS868307 465 + 0.630108
xcsI XCV0761 type II secretory pathway pseudopilinchromosome CDS869277 381 + 0.666667
xcsJ XCV0762 type II secretion system protein Jchromosome CDS869654 603 + 0.68325
xcsK XCV0763 type II secretion system protein Kchromosome CDS870256 990 + 0.657576
xcsL XCV0764 type II secretion system protein Lchromosome CDS871242 1089 + 0.686869
xcsM XCV0765 type II secretion system protein Mchromosome CDS872327 477 + 0.668763
xpsD XCV3658 type II secretory pathway componentchromosome CDS4213303 2280 - 0.579825
xpsE XCV3668 type II secretory pathway ATPasechromosome CDS4222639 1728 - 0.632523
xpsF XCV3667 type II secretory pathway componentchromosome CDS4221246 1218 - 0.644499
xpsG XCV3666 type II secretory pathway pseudopilinchromosome CDS4220545 492 - 0.630081
xpsH XCV3665 general secretion pathway proteinchromosome CDS4220026 510 - 0.690196
xpsI XCV3664 type II secretory pathway pseudopilinchromosome CDS4219613 417 - 0.671463
xpsJ XCV3663 general secretion pathway protein Jchromosome CDS4218981 636 - 0.665094
xpsK XCV3662 general secretion pathway protein Kchromosome CDS4218133 906 - 0.660044
xpsL XCV3661 general secretion pathway proteinchromosome CDS4217015 1122 - 0.676471
yajC XCV2694 preprotein translocase subunit YajCchromosome CDS3051168 354 - 0.635593
yapH XCV4203 filamentous hemagglutinin-related proteinchromosome CDS4814988 8184 - 0.678519
yidC XCV4485 preprotein translocase subunit YidCchromosome CDS5175858 1725 - 0.662609