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2024-05-25 08:34:41

Gene list

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COG category: Intracellular trafficking and secretion
Genomic element: chromosome

Number of genes found: 109

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Dechloromonas aromatica RCB, RCB
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Daro_3404 ATPaschromosome CDS3653738 1380 + 0.610145
NA Daro_2009 Peptidase S49chromosome CDS2165074 963 + 0.541018
NA Daro_2987 TPR repeatchromosome CDS3225279 801 - 0.54432
NA Daro_3216 type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminalchromosome CDS3468531 2004 + 0.629741
NA Daro_3883 Pilus retraction protein PilTchromosome CDS4176677 1044 - 0.563218
NA Daro_3040 General secretion pathway protein Hchromosome CDS3284774 534 - 0.52809
NA Daro_0747 hypothetical proteinchromosome CDS818997 285 - 0.547368
NA Daro_4056 MotA/TolQ/ExbB proton channelchromosome CDS4354443 678 - 0.594395
NA Daro_3279 YajCchromosome CDS3530275 327 + 0.584098
NA Daro_3222 type II secretion system proteinchromosome CDS3473088 1185 + 0.644726
NA Daro_3405 type II and III secretion system proteinchromosome CDS3655224 1785 + 0.577591
NA Daro_0866 conserved hypothetical proteinchromosome CDS937380 3111 + 0.57152
NA Daro_3223 type II secretion system protein Echromosome CDS3474282 1695 + 0.656047
NA Daro_3210 MotA/TolQ/ExbB proton channelchromosome CDS3460570 606 - 0.594059
NA Daro_0761 Flagellar biosynthesis protein FliRchromosome CDS830981 783 - 0.560664
NA Daro_0773 Flagellar FliF M-ring proteinchromosome CDS839925 1755 - 0.57208
NA Daro_1214 hypothetical proteinchromosome CDS1317948 1833 + 0.57665
NA Daro_3209 Biopolymer transport protein ExbD/TolRchromosome CDS3460153 414 - 0.594203
NA Daro_4053 TolB, N-terminal:WD40-like Beta Propellerchromosome CDS4351886 1314 - 0.613394
NA Daro_3221 General secretion pathway protein Gchromosome CDS3472606 471 + 0.624204
NA Daro_0894 general secretion pathway protein, ATPasechromosome CDS967195 828 + 0.619565
NA Daro_3218 general secretion pathway protein Gchromosome CDS3471013 381 + 0.656168
NA Daro_0893 type II and III secretion system protein:Secretin, N-terminal:Secretin/TonB, short N-terminalchromosome CDS965404 1758 + 0.608646
NA Daro_1386 hypothetical proteinchromosome CDS1517007 804 - 0.539801
NA Daro_0762 Flagellar biosynthesis protein FliQchromosome CDS831765 252 - 0.543651
NA Daro_1114 Biopolymer transport protein ExbD/TolRchromosome CDS1217329 426 - 0.600939
NA Daro_0306 SecE subunit of protein translocation complexchromosome CDS349092 354 + 0.542373
NA Daro_0776 Flagellar hook-basal body complex protein FliEchromosome CDS844396 324 + 0.537037
NA Daro_3926 Type I secretion outer membrane protein, TolCchromosome CDS4221189 1326 + 0.586727
NA Daro_3919 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS4213473 1470 - 0.665986
NA Daro_2655 conserved hypothetical proteinchromosome CDS2850196 591 + 0.646362
NA Daro_2803 Outer membrane efflux proteinchromosome CDS3010652 1245 + 0.661847
NA Daro_3199 VCBSchromosome CDS3435124 14565 - 0.644696
NA Daro_0339 SecY proteinchromosome CDS374907 1323 + 0.525321
NA Daro_2478 Outer membrane efflux proteinchromosome CDS2676095 1251 + 0.670663
NA Daro_3994 heme exporter protein Dchromosome CDS4293652 201 + 0.557214
NA Daro_0214 type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminalchromosome CDS229610 2148 + 0.503259
NA Daro_2106 Filamentous haemagglutinin, N-terminalchromosome CDS2268611 6240 + 0.614263
NA Daro_0770 ATPase FliI/YscNchromosome CDS836818 1419 - 0.600423
NA Daro_1115 MotA/TolQ/ExbB proton channelchromosome CDS1217756 744 - 0.638441
NA Daro_3369 Peptidoglycan-binding LysMchromosome CDS3627475 1797 + 0.586533
NA Daro_0212 Pilus assembly protein, PilOchromosome CDS228388 684 + 0.472222
NA Daro_0019 SMF proteinchromosome CDS24827 1077 - 0.61467
NA Daro_0948 Preprotein translocase SecG subunitchromosome CDS1028887 372 + 0.553763
NA Daro_0740 Flagellar biosynthesis protein FlhAchromosome CDS811801 2085 + 0.566427
NA Daro_0639 type II secretion system protein E:General secretory system II, protein E, N-terminalchromosome CDS701114 1716 - 0.555944
NA Daro_1176 Outer membrane efflux proteinchromosome CDS1280506 1290 + 0.623256
NA Daro_2624 lipoprotein signal peptidase-like proteinchromosome CDS2823130 336 - 0.559524
NA Daro_2401 ATPaschromosome CDS2589019 1077 + 0.506964
NA Daro_2107 probable activation/secretion signal peptide proteinchromosome CDS2274859 1647 + 0.587128
NA Daro_3217 Prokaryotic N-terminal methylation sitechromosome CDS3470531 480 + 0.641667
NA Daro_0642 Signal recognition particle proteinchromosome CDS705060 1368 + 0.57383
NA Daro_3488 SecA proteinchromosome CDS3735877 2715 - 0.601473
NA Daro_3920 probable lipoprotein signal peptidechromosome CDS4215083 396 - 0.633838
NA Daro_4201 60 kDa inner membrane insertion proteinchromosome CDS4498621 1644 - 0.56691
NA Daro_3356 Fimbrial protein pilin:Bacterial general secretion pathway protein Hchromosome CDS3613758 414 - 0.502415
NA Daro_0213 Pilus assembly protein, PilQchromosome CDS229068 546 + 0.5
NA Daro_3045 Peptidase A8, signal peptidase IIchromosome CDS3287977 480 - 0.591667
NA Daro_1165 Outer membrane efflux proteinchromosome CDS1269411 1389 + 0.650828
NA Daro_3280 SecD/SecF/SecDF export membrane protein:SecD export membrane proteinchromosome CDS3530650 1878 + 0.633653
NA Daro_1725 Pilus retraction protein PilTchromosome CDS1853326 1188 - 0.576599
NA Daro_0880 type II secretion system proteinchromosome CDS953947 1221 + 0.592138
NA Daro_2630 Peptidase A8, signal peptidase IIchromosome CDS2830163 501 - 0.606786
NA Daro_2691 hypothetical proteinchromosome CDS2885129 2094 - 0.592646
NA Daro_0210 Type IV pilus assembly protein PilMchromosome CDS226740 1086 + 0.531308
NA Daro_0261 Protein of unknown function DUF107chromosome CDS303705 441 - 0.61678
NA Daro_0294 Outer membrane efflux proteinchromosome CDS335325 1263 + 0.631829
NA Daro_0927 conserved hypothetical proteinchromosome CDS1005941 1056 - 0.5625
NA Daro_3408 type II secretion system proteinchromosome CDS3659988 1200 + 0.596667
NA Daro_0739 Flagellar biosynthetic protein FlhBchromosome CDS810661 1140 + 0.558772
NA Daro_2162 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS2334288 1428 + 0.642857
NA Daro_2322 conserved hypothetical proteinchromosome CDS2502913 597 + 0.653266
NA Daro_3036 putative Tfp pilus assembly protein tip-associated adhesin PilY1chromosome CDS3278079 4635 - 0.507228
NA Daro_1877 Outer membrane efflux proteinchromosome CDS2019051 1242 - 0.640097
NA Daro_3827 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS4114760 1515 - 0.69637
NA Daro_0769 Flagellar FliJ and relatedchromosome CDS836356 456 - 0.539474
NA Daro_3407 type II secretion system protein E:General secretory system II, protein E, N-terminalchromosome CDS3658279 1707 + 0.616872
NA Daro_3374 Twin-arginine translocation protein TatBchromosome CDS3632833 363 - 0.597796
NA Daro_3039 hypothetical proteinchromosome CDS3284370 387 - 0.547804
NA Daro_0771 Flagellar assembly protein FliHchromosome CDS838221 696 - 0.576149
NA Daro_3882 Pilus retraction protein PilTchromosome CDS4175507 1137 - 0.581354
NA Daro_1718 Peptidase S14, ClpPchromosome CDS1846434 630 - 0.584127
NA Daro_2628 Outer membrane efflux proteinchromosome CDS2828159 1299 - 0.6505
NA Daro_3373 Sec-independent periplasmic protein translocasechromosome CDS3632009 828 - 0.559179
NA Daro_2653 conserved hypothetical proteinchromosome CDS2847267 2568 + 0.61176
NA Daro_3375 Twin-arginine translocation protein TatA/Echromosome CDS3633241 231 - 0.558442
NA Daro_2254 Outer membrane efflux proteinchromosome CDS2440339 1311 - 0.641495
NA Daro_0966 type II secretion system protein E:Response regulator receiver:General secretory system II, protein E, N-terminalchromosome CDS1049883 2241 - 0.606426
NA Daro_0613 protein export chaperone SecBchromosome CDS681384 459 + 0.562092
NA Daro_2263 Outer membrane efflux proteinchromosome CDS2448953 1275 + 0.606274
NA Daro_2620 Outer membrane efflux proteinchromosome CDS2820251 1299 - 0.659738
NA Daro_1926 conserved hypothetical proteinchromosome CDS2073316 624 + 0.544872
NA Daro_4055 Biopolymer transport protein ExbD/TolRchromosome CDS4354032 408 - 0.568627
NA Daro_0211 Fimbrial assemblychromosome CDS227822 570 + 0.498246
NA Daro_0638 type II secretion system proteinchromosome CDS699872 1227 - 0.535452
NA Daro_2195 Type IV pilus assembly PilZchromosome CDS2371391 363 - 0.578512
NA Daro_1151 type II secretion system protein E:General secretory system II, protein E, N-terminalchromosome CDS1255520 1869 + 0.591225
NA Daro_3281 SecD/SecF/SecDF export membrane protein:SecF proteinchromosome CDS3532540 945 + 0.584127
NA Daro_3745 Protein of unknown function DUF1555chromosome CDS4025770 585 + 0.523077
NA Daro_0765 Type III secretion system outer membrane O proteinchromosome CDS833234 444 - 0.560811
NA Daro_3718 Cell division transporter substrate-binding protein FtsYchromosome CDS3997077 1086 - 0.615101
NA Daro_3041 general secretion pathway protein Hchromosome CDS3285301 417 - 0.489209
NA Daro_0781 Flagellar protein FliSchromosome CDS847242 408 - 0.563725
NA Daro_0763 Flagellar transport protein FliPchromosome CDS832031 747 - 0.543507
NA Daro_0879 type II secretion system protein E:General secretory system II, protein E, N-terminalchromosome CDS952232 1710 + 0.600585
NA Daro_3038 hypothetical proteinchromosome CDS3283367 999 - 0.536537
NA Daro_2320 conserved hypothetical proteinchromosome CDS2499984 2568 + 0.614875
NA Daro_2027 Peptidase S26A, signal peptidase Ichromosome CDS2180236 789 + 0.493029
NA Daro_0637 Peptidase A24A, prepilin type IV:Peptidase A24A, N-terminalchromosome CDS699018 855 - 0.575439