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2024-05-19 06:02:38

Gene list

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COG category: Intracellular trafficking and secretion
Genomic element: chromosome

Number of genes found: 150

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pseudomonas syringae pv. syringae B728a, B728a
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Psyr_0718 type IV pilus assembly protein PilXchromosome CDS820668 495 + 0.567677
NA Psyr_0021 SMF proteinchromosome CDS24821 1119 + 0.641644
NA Psyr_2316 general secretion pathway protein I, putativechromosome CDS2692836 396 + 0.638889
NA Psyr_0798 type II secretion system protein E:General secretory system II, protein E, N-terminalchromosome CDS903509 1695 - 0.534513
NA Psyr_0383 Twin-arginine translocation protein TatBchromosome CDS413752 477 - 0.624738
NA Psyr_3454 ATPase FliI/YscNchromosome CDS4116887 1359 - 0.632818
NA Psyr_0204 Biopolymer transport protein ExbD/TolRchromosome CDS219306 426 - 0.584507
NA Psyr_2864 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS3435495 1407 - 0.628287
NA Psyr_1747 Peptidase S14, ClpPchromosome CDS1984783 642 + 0.571651
NA Psyr_4498 Biopolymer transport protein ExbD/TolRchromosome CDS5360832 426 + 0.629108
NA Psyr_1195 Secretory protein YscJ/FliFchromosome CDS1355109 807 + 0.604709
NA Psyr_0403 Type IV pilus assembly protein PilMchromosome CDS433624 1065 + 0.613146
NA Psyr_4394 type II secretion system proteinchromosome CDS5256440 885 + 0.614689
NA Psyr_0543 Type I secretion outer membrane protein, TolCchromosome CDS613307 1440 - 0.630556
NA Psyr_3077 Type I secretion outer membrane protein, TolCchromosome CDS3680341 1476 - 0.567751
NA Psyr_2770 tail fiber domain proteinchromosome CDS3354775 1104 - 0.563406
NA Psyr_3590 conserved hypothetical proteinchromosome CDS4271541 486 + 0.58642
NA Psyr_3446 Surface presentation of antigens (SPOA) proteinchromosome CDS4109479 459 - 0.570806
NA Psyr_1215 Type III secretion protein HrcVchromosome CDS1371411 2088 - 0.603448
NA Psyr_1641 Peptidase S49, SppAchromosome CDS1847951 999 + 0.590591
NA Psyr_4482 Biopolymer transport protein ExbD/TolRchromosome CDS5343623 405 + 0.622222
NA Psyr_2289 Biopolymer transport protein ExbD/TolRchromosome CDS2659017 402 + 0.579602
NA Psyr_0717 type IV pilus assembly protein PilWchromosome CDS819949 708 + 0.574859
NA Psyr_0404 Fimbrial assemblychromosome CDS434688 576 + 0.583333
NA Psyr_0407 type II and III secretion system protein:NolW-like:NolW-likechromosome CDS436404 2157 + 0.606398
NA Psyr_3390 Heme exporter protein D (CcmD)chromosome CDS4049062 177 - 0.610169
NA Psyr_2492 Outer membrane autotransporter barrelchromosome CDS2899921 2745 - 0.620401
NA Psyr_1281 Signal recognition particle proteinchromosome CDS1447349 1377 + 0.604938
NA Psyr_3151 type II secretion system protein E:General secretory system II, protein E, N-terminalchromosome CDS3775147 1758 - 0.622298
NA Psyr_4497 MotA/TolQ/ExbB proton channelchromosome CDS5360104 729 + 0.639232
NA Psyr_1218 type III helper protein HrpK(Pto)chromosome CDS1375465 2313 + 0.595331
NA Psyr_0714 type IV pilus biogenesis proteinchromosome CDS818332 501 - 0.592814
NA Psyr_1413 Biopolymer transport protein ExbD/TolRchromosome CDS1598532 465 + 0.55914
NA Psyr_0799 Fimbrial protein pilinchromosome CDS905429 420 + 0.495238
NA Psyr_1395 virulencechromosome CDS1577656 1335 - 0.621723
NA Psyr_3952 conserved hypothetical proteinchromosome CDS4699372 378 - 0.502645
NA Psyr_0874 Biopolymer transport protein ExbD/TolRchromosome CDS996605 408 + 0.561275
NA Psyr_1205 Type III secretion protein HrpY/HrcUchromosome CDS1364133 1080 - 0.573148
NA Psyr_3195 NolW-likechromosome CDS3824645 744 + 0.59543
NA Psyr_1968 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS2281105 1389 - 0.654428
NA Psyr_1207 Type III secretion protein HrpOchromosome CDS1366004 267 - 0.606742
NA Psyr_3489 FlgNchromosome CDS4158023 468 + 0.576923
NA Psyr_1415 TolB, N-terminal:TolB, N-terminalchromosome CDS1600063 1302 + 0.565284
NA Psyr_0382 Sec-independent periplasmic protein translocasechromosome CDS412955 801 - 0.596754
NA Psyr_2620 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS3177351 1431 + 0.634521
NA Psyr_2038 pili assembly chaperone:Bacterial pili assembly chaperonechromosome CDS2367444 747 - 0.562249
NA Psyr_4395 type II secretion system proteinchromosome CDS5257326 885 + 0.59548
NA Psyr_3441 Flagellar biosynthetic protein FlhBchromosome CDS4106062 1137 - 0.596306
NA Psyr_2606 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS3060225 1437 - 0.600557
NA Psyr_3953 Signal peptidase Ichromosome CDS4699864 855 - 0.576608
NA Psyr_1511 type II secretion system protein Echromosome CDS1697514 933 - 0.553055
NA Psyr_3408 Outer membrane autotransporter barrelchromosome CDS4068972 2130 - 0.577934
NA Psyr_1634 Biopolymer transport protein ExbD/TolRchromosome CDS1838687 432 + 0.587963
NA Psyr_4183 Preprotein translocase SecG subunitchromosome CDS4976553 381 - 0.514436
NA Psyr_0405 Pilus assembly protein, PilOchromosome CDS435260 624 + 0.583333
NA Psyr_1510 prepilinchromosome CDS1696111 1407 - 0.569296
NA Psyr_1412 MotA/TolQ/ExbB proton channelchromosome CDS1597822 696 + 0.579023
NA Psyr_2485 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS2886987 1464 + 0.620902
NA Psyr_3870 SEC-C motifchromosome CDS4608743 201 + 0.577114
NA Psyr_1230 SecD/SecF/SecDF export membrane protein:SecD export membrane proteinchromosome CDS1388001 1869 + 0.58855
NA Psyr_2037 Fimbrial biogenesis outer membrane usher proteinchromosome CDS2364893 2514 - 0.606603
NA Psyr_3159 Type I secretion outer membrane protein, TolCchromosome CDS3786200 1350 - 0.608148
NA Psyr_0719 type IV pilus-associated protein, putativechromosome CDS821149 3210 + 0.55919
NA Psyr_0935 Type I secretion outer membrane protein, TolCchromosome CDS1069923 1410 + 0.6
NA Psyr_1608 ice-nucleation proteins octamer repeatchromosome CDS1807674 4047 + 0.60934
NA Psyr_0205 MotA/TolQ/ExbB proton channelchromosome CDS219735 963 - 0.634476
NA Psyr_4561 SecE subunit of protein translocation complexchromosome CDS5419660 369 - 0.517615
NA Psyr_3463 Flagellar protein FliSchromosome CDS4127176 390 - 0.576923
NA Psyr_4751 Cell division transporter substrate-binding protein FtsYchromosome CDS5626435 1518 - 0.6278
NA Psyr_2460 Peptidase S49chromosome CDS2847916 1023 + 0.58651
NA Psyr_2034 Outer membrane autotransporter barrelchromosome CDS2359849 2199 + 0.599818
NA Psyr_1209 Surface presentation of antigens (SPOA) proteinchromosome CDS1366928 399 - 0.609023
NA Psyr_4481 MotA/TolQ/ExbB proton channelchromosome CDS5342929 693 + 0.647908
NA Psyr_3444 Flagellar transport protein FliPchromosome CDS4108286 753 - 0.581673
NA Psyr_1514 type II secretion system protein Echromosome CDS1700093 1632 - 0.560049
NA Psyr_1200 type II and III secretion system protein:NolW-likechromosome CDS1357786 2103 + 0.602948
NA Psyr_0249 type II secretion system protein E:General secretory system II, protein E, N-terminalchromosome CDS261709 1785 - 0.612885
NA Psyr_4392 pilus assembly protein CpaEchromosome CDS5253975 1191 + 0.628883
NA Psyr_2969 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS3560826 1398 + 0.651645
NA Psyr_3381 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS4039846 1434 + 0.642259
NA Psyr_0410 conserved hypothetical proteinchromosome CDS440312 1623 + 0.627234
NA Psyr_0137 Biopolymer transport protein ExbD/TolRchromosome CDS145986 402 + 0.584577
NA Psyr_2339 hypothetical proteinchromosome CDS2716405 228 - 0.535088
NA Psyr_3458 Flagellar hook-basal body complex protein FliEchromosome CDS4121878 336 - 0.556548
NA Psyr_1513 type II secretion system proteinchromosome CDS1699012 1092 - 0.565934
NA Psyr_3147 general secretion pathway protein I, putativechromosome CDS3772677 372 - 0.610215
NA Psyr_1654 Type IV pilus assembly PilZchromosome CDS1858666 357 + 0.563025
NA Psyr_3488 Anti-sigma-28 factor, FlgMchromosome CDS4157659 315 + 0.536508
NA Psyr_1443 conserved hypothetical proteinchromosome CDS1633383 456 - 0.587719
NA Psyr_3455 Flagellar assembly protein FliHchromosome CDS4118235 819 - 0.579976
NA Psyr_0796 Prepilin peptidasechromosome CDS901415 873 - 0.596793
NA Psyr_1206 Type III secretion protein SpaR/YscTchromosome CDS1365209 795 - 0.602516
NA Psyr_2039 Fimbrial proteinchromosome CDS2368298 552 - 0.586957
NA Psyr_1246 TPR repeat:TPR repeatchromosome CDS1401579 759 + 0.571805
NA Psyr_1131 Fimbrial proteinchromosome CDS1282298 585 + 0.57094
NA Psyr_0711 Peptidase A8, signal peptidase IIchromosome CDS816344 507 + 0.609467
NA Psyr_0720 Fimbrial protein pilinchromosome CDS824370 402 + 0.569652
NA Psyr_1184 Pectate lyasechromosome CDS1338293 1326 - 0.591252
NA Psyr_4391 type II and III secretion system proteinchromosome CDS5252728 1251 + 0.632294
NA Psyr_1213 ATPase FliI/YscNchromosome CDS1369057 1350 - 0.657037
NA Psyr_1045 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS1180342 1485 + 0.655219
NA Psyr_4389 Flp/Fap pilin componentchromosome CDS5251210 207 - 0.492754
NA Psyr_3442 Flagellar biosynthesis protein FliRchromosome CDS4107199 786 - 0.59542
NA Psyr_4390 Flp pilus assembly CpaBchromosome CDS5251748 960 + 0.642708
NA Psyr_3440 Flagellar biosynthesis protein FlhAchromosome CDS4103602 2130 - 0.586854
NA Psyr_1132 pili assembly chaperone:Bacterial pili assembly chaperonechromosome CDS1282904 795 + 0.555975
NA Psyr_2288 MotA/TolQ/ExbB proton channelchromosome CDS2658248 768 + 0.626302
NA Psyr_4409 Multiple antibiotic resistance (MarC)-related proteinschromosome CDS5273741 597 + 0.586265
NA Psyr_1133 Fimbrial biogenesis outer membrane usher proteinchromosome CDS1283830 2535 + 0.628402
NA Psyr_0478 Pilus retraction protein PilTchromosome CDS516463 1035 + 0.604831
NA Psyr_2191 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS2546254 1473 - 0.598778
NA Psyr_1229 YajCchromosome CDS1387602 336 + 0.550595
NA Psyr_3148 General secretion pathway protein Hchromosome CDS3773048 435 - 0.634483
NA Psyr_3141 type II and III secretion system protein:NolW-likechromosome CDS3766783 2331 - 0.61819
NA Psyr_4009 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS4775378 1461 + 0.63039
NA Psyr_0797 type II secretion system proteinchromosome CDS902289 1218 - 0.490969
NA Psyr_3457 Flagellar FliF M-ring proteinchromosome CDS4120078 1785 - 0.604482
NA Psyr_4643 conjugal transfer proteinchromosome CDS5507043 972 + 0.545267
NA Psyr_3805 unnamed protein product; similar to a putative DNA processing proteinchromosome CDS4524298 1368 + 0.526316
NA Psyr_1661 conserved hypothetical proteinchromosome CDS1864113 2847 + 0.619951
NA Psyr_3083 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS3688696 1473 - 0.63408
NA Psyr_4094 SecA proteinchromosome CDS4880445 2742 - 0.582422
NA Psyr_0931 Hemolysin-type calcium-binding regionchromosome CDS1063750 1455 - 0.575258
NA Psyr_0406 Pilus assembly protein, PilQchromosome CDS435880 528 + 0.598485
NA Psyr_1208 Yop virulence translocation protein Rchromosome CDS1366278 654 - 0.576453
NA Psyr_3736 Peptidoglycan-binding LysMchromosome CDS4449181 2214 - 0.640018
NA Psyr_1134 pili assembly chaperonechromosome CDS1286361 786 + 0.641221
NA Psyr_3443 Flagellar biosynthesis protein FliQchromosome CDS4107991 270 - 0.574074
NA Psyr_4528 SecY proteinchromosome CDS5392929 1335 - 0.549064
NA Psyr_4393 type II secretion system protein Echromosome CDS5255165 1257 + 0.62848
NA Psyr_1428 conserved hypothetical proteinchromosome CDS1616775 1368 - 0.565058
NA Psyr_1633 MotA/TolQ/ExbB proton channelchromosome CDS1837974 717 + 0.595537
NA Psyr_4396 TPR repeatchromosome CDS5258246 735 + 0.629932
NA Psyr_1517 type II and III secretion system proteinchromosome CDS1703673 1737 - 0.57513
NA Psyr_0877 MotA/TolQ/ExbB proton channelchromosome CDS1000107 651 + 0.588326
NA Psyr_2906 Pilus retraction protein PilTchromosome CDS3485827 1170 - 0.611111
NA Psyr_4801 Outer membrane efflux proteinchromosome CDS5690688 1227 + 0.660147
NA Psyr_1231 SecD/SecF/SecDF export membrane protein:SecF proteinchromosome CDS1389879 912 + 0.601974
NA Psyr_1442 conserved hypothetical proteinchromosome CDS1630375 3009 - 0.560319
NA Psyr_4882 protein export chaperone SecBchromosome CDS5792954 489 - 0.584867
NA Psyr_0715 pillin, putativechromosome CDS818964 474 + 0.578059
NA Psyr_1519 SEC-C motifchromosome CDS1706691 1467 - 0.514656
NA Psyr_0136 MotA/TolQ/ExbB proton channelchromosome CDS145279 708 + 0.635593
NA Psyr_3453 flagellar protein FliJ, putativechromosome CDS4116431 450 - 0.604444
NA Psyr_0384 Twin-arginine translocation protein TatA/Echromosome CDS414233 276 - 0.583333
NA Psyr_1030 bacteriophage N4 adsorption protein Bchromosome CDS1161268 2121 - 0.603017
NA Psyr_3150 type II secretion system proteinchromosome CDS3773948 1203 - 0.631754
NA Psyr_2036 Fimbrial proteinchromosome CDS2363731 1116 - 0.586021
NA Psyr_5134 60 kDa inner membrane proteinchromosome CDS6090630 1692 - 0.554374
NA Psyr_3149 General secretion pathway protein Gchromosome CDS3773491 432 - 0.604167