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2024-05-18 15:20:46

Gene list

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COG category: Intracellular trafficking and secretion
Genomic element: chromosome 1

Number of genes found: 104

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Burkholderia pseudomallei K96243, K96243
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BPSL3262 putative plasmid conjugal transfer proteinchromosome 1 CDS3877520 1431 - 0.589797
NA BPSL0784 putative exported proteinchromosome 1 CDS912788 474 + 0.672996
NA BPSL0078 putative membrane proteinchromosome 1 CDS88374 1677 + 0.641622
NA BPSL0106 putative exported proteinchromosome 1 CDS117179 570 - 0.664912
NA BPSL3263 putative plasmid conjugal transfer proteinchromosome 1 CDS3879171 780 - 0.584615
NA BPSL3170 putative secretion system proteinchromosome 1 CDS3774618 1329 - 0.699774
NA BPSL1893 putative type II/IV secretion system ATP-binding proteinchromosome 1 CDS2254426 1344 - 0.676339
NA BPSL3008 putative type IV pilus assembly proteinchromosome 1 CDS3584982 1260 + 0.719841
NA BPSL1626 putative fimbrial subunit type 1 precursorchromosome 1 CDS1883679 531 + 0.636535
NA BPSL1903 putative exported heme utilisation related proteinchromosome 1 CDS2264383 1680 + 0.6625
NA BPSL1892 putative fimbriae-related outer membrane proteinchromosome 1 CDS2253426 1008 - 0.731151
NA BPSL1898 family A24A unassigned peptidasechromosome 1 CDS2259910 501 - 0.666667
NA BPSL1813 putative fimbriae-related membrane proteinchromosome 1 CDS2160315 945 - 0.725926
NA BPSL1631 putative outer membrane proteinchromosome 1 CDS1889771 3375 + 0.66963
NA BPSL1628 putative fimbrial usher proteinchromosome 1 CDS1885085 2553 + 0.667842
NA BPSL1566 putative outer membrane lipoproteinchromosome 1 CDS1817818 1905 - 0.745407
NA BPSL1661 putative hemolysin-related proteinchromosome 1 CDS1925148 9690 + 0.652012
NA BPSL1896 putative membrane fimbriae assembly proteinchromosome 1 CDS2258467 900 - 0.743333
NA BPSL2940 putative transport-related membrane proteinchromosome 1 CDS3511619 708 - 0.741525
NA BPSL2028 putative fimbriae-assembly chaperonechromosome 1 CDS2423980 840 - 0.721429
NA BPSL3094 putative outer membrane bacteriocin efflux proteinchromosome 1 CDS3693290 1449 + 0.689441
NA BPSL2752 putative fimbrial protein precursorchromosome 1 CDS3293420 453 - 0.675497
NA BPSL1897 putative membrane proteinchromosome 1 CDS2259446 468 - 0.673077
NA BPSL0514 putative cell division proteinchromosome 1 CDS568161 1320 - 0.708333
NA BPSL1802 multidrug efflux system putative membrane lipoproteinchromosome 1 CDS2146271 1551 - 0.74597
NA BPSL1815 putative fimbriae assembly-related proteinchromosome 1 CDS2162248 1575 - 0.711111
NA BPSL2997 MarC family integral membrane proteinchromosome 1 CDS3573296 603 - 0.66335
NA BPSL0782 putative type 4 fimbrial pilin proteinchromosome 1 CDS909649 519 + 0.72447
NA BPSL1894 putative fimbriae assembly proteinchromosome 1 CDS2255773 1239 - 0.724778
NA BPSL1007 putative fimbriae usher proteinchromosome 1 CDS1171461 2301 - 0.717949
NA BPSL0268 putative negative regulator of flagellin synthesischromosome 1 CDS280340 345 - 0.715942
NA BPSL2756 putative exported proteinchromosome 1 CDS3295677 561 - 0.723708
NA BPSL1895 putative exported fimbriae assembly proteinchromosome 1 CDS2257078 1326 - 0.698341
NA BPSL1819 putative fimbriae-assembly related proteinchromosome 1 CDS2166995 1053 - 0.773029
NA BPSL2063 putative membrane proteinchromosome 1 CDS2467978 3273 - 0.695692
NA BPSL1660 putative outer membrane proteinchromosome 1 CDS1923238 1800 + 0.640556
NA BPSL0120 SMF family proteinchromosome 1 CDS135094 1191 - 0.745592
NA BPSL1800 putative outer membrane usher protein precursorchromosome 1 CDS2141243 2469 - 0.697448
NA BPSL1799 putative fimbrial chaperonechromosome 1 CDS2140378 750 - 0.705333
NA BPSL3347 putative bacteriophage-related lipoproteinchromosome 1 CDS3969661 1377 - 0.610748
NA BPSL0267 putative flagella synthesis proteinchromosome 1 CDS279820 441 - 0.689342
NA BPSL1814 putative membrane proteinchromosome 1 CDS2161256 996 - 0.73494
NA BPSL1801 putative type-1 fimbrial proteinchromosome 1 CDS2143834 513 - 0.672515
NA BPSL1972 putative antibiotic resistance membrane proteinchromosome 1 CDS2347021 1953 + 0.735279
NA BPSL2870 putative membrane proteinchromosome 1 CDS3435044 327 + 0.608563
NA BPSL1890 putative lipoproteinchromosome 1 CDS2251432 966 - 0.738095
NA BPSL1913 putative exported proteinchromosome 1 CDS2279266 1497 + 0.702071
NA BPSL2027 putative fimbriae-related proteinchromosome 1 CDS2421524 2349 - 0.710089
NA BPSL0019 outer membrane efflux lipoproteinchromosome 1 CDS20480 1656 - 0.74215
NA BPSL3136 putative membrane proteinchromosome 1 CDS3737300 621 - 0.644122
NA BPSL2448 family S49 unassigned peptidasechromosome 1 CDS2951945 1002 - 0.681637
NA BPSL1627 putative fimbrial assembly chaperone precursorchromosome 1 CDS1884308 771 + 0.645914
NA BPSL2022 putative drug-resistance related outer-membrane proteinchromosome 1 CDS2415534 1581 + 0.746996
NA BPSL2456 putative membrane proteinchromosome 1 CDS2962365 288 + 0.611111
NA BPSL1811 putative membrane proteinchromosome 1 CDS2158781 429 - 0.67366
NA BPSL1233 putative lipoproteinchromosome 1 CDS1416651 1263 + 0.692003
NA BPSL1629 putative exported fimbria-related proteinchromosome 1 CDS1887634 966 + 0.660455
NA BPSL2939 putative transport-related membrane proteinchromosome 1 CDS3511066 513 - 0.736842
NA BPSL1891 putative outer-membrane proteinchromosome 1 CDS2252404 1026 - 0.732943
NA BPSL1705 putative membrane proteinchromosome 1 CDS1982643 4821 + 0.633686
NA BPSL1818 putative fimbriae assembly-related proteinchromosome 1 CDS2165512 1320 - 0.70303
NA BPSL1008 putative exported fimbriae-related chaperonechromosome 1 CDS1174516 711 - 0.731364
clpP BPSL1403 ATP-dependent Clp protease proteolytic subunitchromosome 1 CDS1631727 654 + 0.639144
ffh BPSL2995 signal recognition particle proteinchromosome 1 CDS3571089 1368 + 0.668129
flhA BPSL3294 flagellar biosynthesis protein FlhAchromosome 1 CDS3911356 2103 - 0.670471
flhB BPSL3295 flagellar biosynthetic protein FlhBchromosome 1 CDS3913455 1218 - 0.690476
fliE BPSL0231 flagellar hook-basal body complex proteinchromosome 1 CDS242591 342 + 0.652047
fliF BPSL0230 flagellar M-ring proteinchromosome 1 CDS240547 1797 - 0.698386
fliH BPSL0228 flagellar assembly proteinchromosome 1 CDS238889 681 - 0.737151
fliI BPSL0227 flagellum-specific ATP synthasechromosome 1 CDS237324 1572 - 0.725827
fliJ BPSL0226 flagellar fliJ proteinchromosome 1 CDS236866 453 - 0.719647
fliN BPSL0028 probable flagellar motor switch proteinchromosome 1 CDS29761 498 + 0.680723
fliP BPSL0030 flagellar biosynthetic proteinchromosome 1 CDS30991 762 + 0.660105
fliQ BPSL0031 flagellar biosynthetic proteinchromosome 1 CDS31778 273 + 0.677656
fliR BPSL0032 flagellar biosynthetic proteinchromosome 1 CDS32169 783 + 0.676884
fliS BPSL0232 flagellar proteinchromosome 1 CDS243065 435 + 0.666667
gspD BPSL0007 general secretory pathway protein Dchromosome 1 CDS8395 2274 + 0.667986
gspE BPSL0008 general secretory pathway protein Echromosome 1 CDS10665 1494 + 0.696118
gspF BPSL0009 general secretory pathway protein Fchromosome 1 CDS12163 1218 + 0.688834
gspG BPSL0011 general secretory pathway protein Gchromosome 1 CDS14010 453 + 0.624724
gspH BPSL0012 general secretory pathway protein Hchromosome 1 CDS14617 480 + 0.727083
gspI BPSL0013 general secretory pathway protein Ichromosome 1 CDS15099 405 + 0.720988
gspJ BPSL0014 general secretory pathway protein Jchromosome 1 CDS15481 729 + 0.720165
gspK BPSL0015 general secretory pathway protein Kchromosome 1 CDS16391 1071 + 0.693744
gspL BPSL0016 general secretory pathway protein Lchromosome 1 CDS17486 1431 + 0.733054
gspM BPSL0017 general secretory pathway protein Mchromosome 1 CDS18913 507 + 0.710059
gspO BPSL3010 type IV prepilin leader peptide type M1chromosome 1 CDS3587485 930 + 0.705376
lepB BPSL2430 signal peptidase Ichromosome 1 CDS2935919 894 - 0.619687
lspA BPSL0905 signal peptidase IIchromosome 1 CDS1055825 501 - 0.662675
oprB BPSL0816 outer membrane efflux proteinchromosome 1 CDS947371 1545 + 0.713269
pilC BPSL3009 type IV pilus assembly protein PilCchromosome 1 CDS3586238 1218 + 0.724138
secA BPSL3016 preprotein translocase SecA subunitchromosome 1 CDS3593040 2796 - 0.654149
secB BPSL0446 protein-export proteinchromosome 1 CDS485609 480 + 0.627083
secD BPSL2871 putative protein-export membrane proteinchromosome 1 CDS3435478 2025 + 0.686914
secE BPSL3227 preprotein translocase SecE subunitchromosome 1 CDS3827986 381 - 0.553806
secF BPSL2872 putative protein-export membrane proteinchromosome 1 CDS3437518 951 + 0.634069
secG BPSL1210 general secretory pathway, protein-export membrane proteinchromosome 1 CDS1396065 378 + 0.674603
secY BPSL3193 preprotein translocase SecY subunitchromosome 1 CDS3798254 1365 - 0.608059
tatA BPSL3128 Sec-independent protein translocase protein TatAchromosome 1 CDS3732947 234 - 0.615385
tatB BPSL3127 Sec-independent protein translocase protein TatBchromosome 1 CDS3732393 528 - 0.714015
tatC BPSL3126 Sec-independent protein translocase protein TatCchromosome 1 CDS3731572 783 - 0.634738
tolB BPSL2764 putative periplasmic TolB proteinchromosome 1 CDS3302378 1302 + 0.650538
tolQ BPSL2761 putative TolQ transport transmembrane proteinchromosome 1 CDS3300011 789 + 0.648923
tolR BPSL2762 putative TolR-related proteinchromosome 1 CDS3300810 450 + 0.66