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2024-05-14 18:34:17

Gene list

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COG category: Intracellular trafficking and secretion
Genomic element: chromosome 2

Number of genes found: 46

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Vibrio parahaemolyticus RIMD 2210633, O3:K6
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
VPA0088 oligogalacturonate lyasechromosome 2 CDS81003 1167 + 0.461868
VPA0152 biopolymer transport protein ExbB-related proteinchromosome 2 CDS148366 1368 + 0.482456
VPA0153 TonB system transport protein ExbB2chromosome 2 CDS149733 555 + 0.479279
VPA0154 TonB system transport protein ExbD2chromosome 2 CDS150284 405 + 0.469136
VPA0225 putative efflux pump channel proteinchromosome 2 CDS228168 1389 + 0.480202
VPA0262 LfgMchromosome 2 CDS264553 282 - 0.446809
VPA0362 putative outer membrane proteinchromosome 2 CDS355443 1503 - 0.499667
VPA0424 TonB system transport protein ExbD1chromosome 2 CDS416947 414 - 0.442029
VPA0425 ExbB-like proteinchromosome 2 CDS417357 693 - 0.502164
VPA0482 putative outer membrane cation efflux proteinchromosome 2 CDS485440 1380 - 0.481884
VPA0655 hypothetical proteinchromosome 2 CDS657915 1044 + 0.483716
VPA0668 hypothetical proteinchromosome 2 CDS668887 18255 + 0.471816
VPA0718 putative membrane proteinchromosome 2 CDS750211 444 - 0.342342
VPA0719 hypothetical proteinchromosome 2 CDS750819 285 + 0.385965
VPA0721 rough colony protein RcpAchromosome 2 CDS751917 1344 + 0.447173
VPA0724 TadAchromosome 2 CDS754909 1266 + 0.457346
VPA0725 putative TadBchromosome 2 CDS756216 870 + 0.425287
VPA0726 putative TadCchromosome 2 CDS757085 867 + 0.399077
VPA0954 agglutination proteinchromosome 2 CDS995564 1314 + 0.428463
VPA0993 hypothetical proteinchromosome 2 CDS1043734 2697 - 0.460512
VPA1208 putative protein-export membrane protein SecFchromosome 2 CDS1281621 903 - 0.458472
VPA1209 protein-export membrane protein SecDchromosome 2 CDS1282526 1836 - 0.46024
VPA1335 putative type III secretion apparatus proteinchromosome 2 CDS1408775 234 - 0.376068
VPA1338 putative ATPase YscNchromosome 2 CDS1410089 1263 - 0.416469
VPA1339 putative type III secretion system EscC proteinchromosome 2 CDS1411351 1464 - 0.406421
VPA1342 putative Type III secretion protein Spa24chromosome 2 CDS1413731 732 - 0.389344
VPA1349 putative Type III secretion protein Spa33chromosome 2 CDS1419513 216 - 0.393519
VPA1354 putative type III secretion system EscU proteinchromosome 2 CDS1422554 1059 - 0.374882
VPA1355 putative type III secretion system EscV proteinchromosome 2 CDS1423630 1884 - 0.386412
VPA1357 hypothetical proteinchromosome 2 CDS1426234 4869 - 0.535223
VPA1504 CsuDchromosome 2 CDS1608101 2409 - 0.474056
VPA1505 CsuCchromosome 2 CDS1610536 780 - 0.375641
VPA1532 hypothetical proteinchromosome 2 CDS1634236 441 - 0.471655
VPA1533 putative flagellum-specific ATP synthasechromosome 2 CDS1634692 1350 - 0.513333
VPA1534 putative flagellar assembly proteinchromosome 2 CDS1636034 756 - 0.494709
VPA1536 putative flagellar M-ring proteinchromosome 2 CDS1637775 1755 - 0.499715
VPA1537 putative flagellar hook-basal body complex proteinchromosome 2 CDS1639533 357 - 0.47619
VPA1541 flagellar motor switch proteinchromosome 2 CDS1643461 372 + 0.478495
VPA1542 putative flagellar assembly proteinchromosome 2 CDS1643851 759 + 0.479578
VPA1543 flagellar biosynthetic proteinchromosome 2 CDS1644622 270 + 0.455556
VPA1544 putative flagellar biosynthetic protein FliRchromosome 2 CDS1644891 777 + 0.486486
VPA1545 flagellar biosynthetic proteinchromosome 2 CDS1645664 1128 + 0.45922
VPA1546 flagellar biosynthesis proteinchromosome 2 CDS1646823 2091 + 0.477284
VPA1551 LafCchromosome 2 CDS1652994 387 + 0.449612
VPA1579 putative outer membrane proteinchromosome 2 CDS1676409 1644 + 0.506083
VPA1600 hypothetical proteinchromosome 2 CDS1698719 642 - 0.456386