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2024-05-19 06:56:48

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, Hildenborough

Number of genes found: 79

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Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, Hildenborough
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA DVU2450 conserved hypothetical proteinRecName: Full=Sec-independent protein translocase protein TatA; chromosome CDS2554552 207 + 0.555556
NA DVU2122 type II/IV secretion system proteinSubName: Full=Type II/IV secretion system protein; chromosome CDS2217377 1434 + 0.643654
NA DVUA0112 type III secretion system protein, YscC familySubName: Full=Type III secretion system protein, YscC family; pDV CDS149369 1875 + 0.666133
NA DVU2119 type II/III secretion system proteinSubName: Full=Type II/III secretion system protein; chromosome CDS2213886 1455 + 0.638488
NA DVU2806 MotA/TolQ/ExbB proton channel family proteinSubName: Full=MotA/TolQ/ExbB proton channel family protein; chromosome CDS2910477 750 + 0.702667
NA DVU3246 RND efflux system, outer membrane protein, NodT familySubName: Full=RND efflux system, outer membrane protein, NodT family; chromosome CDS3415791 1626 + 0.649446
NA DVU2121 response regulatorSubName: Full=Response regulator; chromosome CDS2215766 1215 + 0.657613
NA DVU0862 flagellar protein FliS/hypothetical protein, fusionSubName: Full=Uncharacterized protein; chromosome CDS953768 906 - 0.674393
NA DVU0062 RND efflux system, outer membrane protein, NodT familySubName: Full=RND efflux system, outer membrane protein, NodT family; chromosome CDS73877 1515 + 0.682508
NA DVU3097 outer membrane efflux proteinSubName: Full=Outer membrane efflux protein; chromosome CDS3238096 1320 - 0.619697
NA DVU1077 inner membrane protein, 60 kDaRecName: Full=Membrane protein insertase YidC; AltName: Full=Foldase YidC; AltName: Full=Membrane integrase YidC; AltName: Full=Membrane protein YidC; chromosome CDS1179369 1605 + 0.616199
NA DVU1013 type I secretion outer membrane protein, TolC familySubName: Full=Type I secretion outer membrane protein, TolC family; chromosome CDS1115282 1371 - 0.592268
NA DVU1104 baseplate assembly protein, putativeSubName: Full=Baseplate assembly protein, putative; chromosome CDS1209791 732 - 0.67623
NA DVUA0122 type III secretion system protein, YscR familySubName: Full=Type III secretion system protein, YscR family; pDV CDS161611 651 + 0.617512
NA DVU0913 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1007363 438 - 0.579909
NA DVU2389 biopolymer transport protein, ExbD/TolR familySubName: Full=Biopolymer transport protein, ExbD/TolR family; chromosome CDS2491903 414 + 0.647343
NA DVU3103 tolB protein, putativeRecName: Full=Protein TolB; Flags: Precursor; chromosome CDS3242725 1371 + 0.620715
NA DVUA0139 outer membrane autotransporter barrel domain proteinSubName: Full=Outer membrane autotransporter barrel domain protein; pDV CDS181665 1980 - 0.574748
NA DVUA0121 type III secretion system protein, YopQ familySubName: Full=Type III secretion system protein, YopQ family; pDV CDS160160 1455 + 0.715464
NA DVU2614 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2732473 618 + 0.653722
NA DVU1272 general secretion pathway protein E, putativeSubName: Full=General secretion pathway protein E, putative; chromosome CDS1362349 1722 - 0.63705
NA DVU3234 flagellar biosynthetic protein FliRRecName: Full=Flagellar biosynthetic protein fliR; chromosome CDS3402880 792 - 0.626263
NA DVU0311 flagellar assembly protein FliH, putativeSubName: Full=Flagellar assembly protein FliH, putative; chromosome CDS356222 753 - 0.677291
NA DVU2123 membrane protein, putativeSubName: Full=Membrane protein, putative; chromosome CDS2218890 966 + 0.636646
NA DVU2117 membrane protein, putativeSubName: Full=Membrane protein, putative; chromosome CDS2212495 567 + 0.633157
NA DVU1012 hemolysin-type calcium-binding repeat proteinSubName: Full=Hemolysin-type calcium-binding repeat protein; chromosome CDS1106001 9117 - 0.61687
NA DVU1271 general secretion pathway protein F, putativeSubName: Full=General secretion pathway protein F, putative; chromosome CDS1361119 1227 - 0.601467
NA DVU2118 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2213071 819 + 0.660562
NA DVU1785 membrane protein, MarC familySubName: Full=Membrane protein, MarC family; chromosome CDS1847895 603 + 0.597015
NA DVU0198 minor capsid protein C, degenerateSubName: Full=Minor capsid protein C, degenerate; chromosome CDS244274 1320 + 0.679545
NA DVU1261 conserved domain proteinSubName: Full=Conserved domain protein; chromosome CDS1348254 1761 - 0.621806
NA DVU2116 pilin, putativeSubName: Full=Pilin, putative; chromosome CDS2212101 174 + 0.574713
NA DVUA0041 conserved domain proteinSubName: Full=Conserved domain protein; pDV CDS49094 1320 + 0.674242
NA DVU2263 outer membrane autotransporter barrel domain proteinSubName: Full=Outer membrane autotransporter barrel domain protein; chromosome CDS2356696 1926 - 0.604881
NA DVU1262 twitching motility protein PilTSubName: Full=Twitching motility protein PilT; chromosome CDS1350023 1110 - 0.625225
NA DVU1270 twitching motility proteinSubName: Full=Twitching motility protein; chromosome CDS1359233 1281 - 0.627635
NA DVUA0104 type III secretion inner membrane protein, HrcV familySubName: Full=Type III secretion inner membrane protein, HrcV family; pDV CDS140328 2094 - 0.65425
NA DVU2069 DNA processing protein DprA, putativeSubName: Full=DNA processing protein DprA, putative; chromosome CDS2149978 1992 - 0.667169
NA DVU1501 ClpP protease family proteinSubName: Full=ClpP protease family protein; chromosome CDS1576227 735 - 0.591837
NA DVU2871 minor capsid protein CSubName: Full=Minor capsid protein C; chromosome CDS2965319 1320 - 0.67803
NA DVU2815 outer membrane efflux proteinSubName: Full=Outer membrane efflux protein; chromosome CDS2918385 1611 - 0.666667
NA DVU2124 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2219984 855 + 0.643275
NA DVU2170 minor capsid protein CSubName: Full=Minor capsid protein C; chromosome CDS2266987 1221 - 0.658477
NA DVUA0118 type III secretion protein, YopL familySubName: Full=Type III secretion protein, YopL family; pDV CDS156694 618 + 0.679612
NA DVUA0119 type III secretion system ATPaseSubName: Full=Type III secretion system ATPase; EC=3.6.3.14; pDV CDS157639 1317 + 0.667426
NA DVU1273 bacterial type II/III secretion system proteinSubName: Full=Bacterial type II/III secretion system protein; chromosome CDS1364359 1575 - 0.623492
NA DVUA0101 type III secretion protein, hrpY/hrcU familySubName: Full=Type III secretion protein, hrpY/hrcU family; pDV CDS137887 1041 - 0.627281
NA DVU3100 biopolymer transport protein, ExbD/TolR familySubName: Full=Biopolymer transport protein, ExbD/TolR family; chromosome CDS3240501 420 + 0.590476
NA DVU1367 twin-arginine translocation protein, TatA/E familyRecName: Full=Sec-independent protein translocase protein TatA; chromosome CDS1446107 198 - 0.60101
NA DVU1351 membrane protein, MarC familySubName: Full=Membrane protein, MarC family; chromosome CDS1429780 603 - 0.648425
clpP DVU1335 ATP-dependent Clp protease, proteolytic subunitRecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; chromosome CDS1411273 606 + 0.594059
escJ DVUA0117 type III secretion lipoproteinSubName: Full=Type III secretion lipoprotein; pDV CDS154970 816 + 0.669118
escT DVUA0102 type III secretion inner membrane proteinSubName: Full=Type III secretion inner membrane protein; pDV CDS138924 816 - 0.655637
ffh DVU0840 signal recognition particle proteinRecName: Full=Signal recognition particle protein; AltName: Full=Fifty-four homolog; chromosome CDS927439 1527 - 0.627374
flgM DVU0523 negative regulator of flagellin synthesis FlgMSubName: Full=Negative regulator of flagellin synthesis FlgM; chromosome CDS597294 315 - 0.603175
flhA DVU3232 flagellar biosynthetic protein FlhASubName: Full=Flagellar biosynthetic protein FlhA; chromosome CDS3399495 2112 - 0.642519
flhB DVU3233 flagellar biosynthetic protein FlhBSubName: Full=Flagellar biosynthetic protein FlhB; chromosome CDS3401682 1074 - 0.620112
fliE DVU0314 flagellar basal body component FliERecName: Full=Flagellar hook-basal body complex protein FliE; chromosome CDS359614 336 - 0.604167
fliF DVU0313 flagellar M-ring protein FliFRecName: Full=Flagellar M-ring protein; chromosome CDS357946 1617 - 0.62585
fliI DVU0310 flagellum-specific ATP synthase FliISubName: Full=Flagellum-specific ATP synthase FliI; EC=3.6.3.14; chromosome CDS354912 1314 - 0.67656
fliN DVU0046 flagellar motor switch protein FliNSubName: Full=Flagellar motor switch protein FliN; chromosome CDS52090 513 - 0.633528
fliP DVU0044 flagellar biosynthetic protein fliPSubName: Full=Flagellar biosynthetic protein fliP; chromosome CDS50840 708 - 0.603107
fliQ DVU0043 flagellar biosynthetic protein FliQSubName: Full=Flagellar biosynthetic protein FliQ; chromosome CDS50554 270 - 0.548148
ftsY DVU3059 signal recognition particle-docking protein FtsYRecName: Full=Signal recognition particle receptor FtsY; Short=SRP receptor; chromosome CDS3189021 1467 - 0.638037
invX DVUA0103 type III secretion protein, HrpO familySubName: Full=Type III secretion protein, HrpO family; pDV CDS139746 261 - 0.574713
lepB DVU0704 signal peptidase ISubName: Full=Signal peptidase I; chromosome CDS784042 600 + 0.585
lspA DVU1928 lipoprotein signal peptidaseRecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; Short=SPase II; chromosome CDS2002720 498 + 0.600402
pppA DVU1263 type IV prepilin-like proteins leader peptidaseRecName: Full=Type 4 prepilin-like proteins leader peptide-processing enzyme; EC=2.1.1.-; EC=3.4.23.43; chromosome CDS1351308 804 + 0.610696
secA DVU0825 preprotein translocase, SecA subunitRecName: Full=Protein translocase subunit SecA; chromosome CDS913045 2502 - 0.632694
secD DVU1819 protein-export membrane protein SecDRecName: Full=Protein translocase subunit SecD; chromosome CDS1883311 1599 - 0.641026
secE DVU2922 preprotein translocase, SecE subunitRecName: Full=Protein translocase subunit SecE; chromosome CDS3020976 252 + 0.579365
secF DVU1818 protein-export membrane protein SecFRecName: Full=Protein-export membrane protein SecF; chromosome CDS1882210 1089 - 0.595041
secG DVU1676 preprotein translocase, SecG subunitSubName: Full=Preprotein translocase, SecG subunit; chromosome CDS1755893 351 - 0.584046
secY DVU1323 preprotein translocase, SecY subunitRecName: Full=Protein translocase subunit SecY; chromosome CDS1402058 1314 + 0.568493
sppA DVU3149 signal peptide peptidase SppA, 36K typeSubName: Full=Signal peptide peptidase SppA, 36K type; EC=3.4.-.-; chromosome CDS3300725 891 - 0.635241
tatB DVU1042 twin-arginine translocation protein TatBRecName: Full=Sec-independent protein translocase protein TatB; chromosome CDS1144695 369 - 0.644986
tatC DVU1041 Sec-independent protein translocase TatCRecName: Full=Sec-independent protein translocase protein TatC; chromosome CDS1143464 774 - 0.591731
tolQ-2 DVU3099 tolQ proteinSubName: Full=TolQ protein; chromosome CDS3239799 693 + 0.655123
yajC DVU1820 preprotein translocase, YajC subunitSubName: Full=Preprotein translocase, YajC subunit; chromosome CDS1885040 366 - 0.620219