Gene list
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COG category: Intracellular trafficking and secretion
Organism: Haemophilus ducreyi 35000HP, 35000HP
Number of genes found: 60
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Haemophilus ducreyi 35000HP, 35000HP | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | HD1126 | hypothetical protein | chromosome | CDS | 895685 | 555 | + | 0.30991 |
NA | HD1123 | possible prepilin peptidase dependent protein D | chromosome | CDS | 892515 | 450 | + | 0.331111 |
NA | HD0933 | conserved hypothetical protein | chromosome | CDS | 742130 | 2409 | - | 0.450809 |
NA | HD0318 | possible fimbrial biogenesis and twitching motility protein PilF homolog | chromosome | CDS | 252640 | 546 | - | 0.351648 |
NA | HD1309 | flp operon protein B | chromosome | CDS | 1070407 | 435 | - | 0.370115 |
NA | HD1436 | putative phage-related secreted protein | chromosome | CDS | 1177679 | 1125 | - | 0.398222 |
NA | HD1305 | flp operon protein D | chromosome | CDS | 1066538 | 1122 | - | 0.349376 |
NA | HD1094 | possible outer membrane serine protease | chromosome | CDS | 871818 | 2313 | + | 0.375703 |
NA | HD0105 | hypothetical protein | chromosome | CDS | 79231 | 738 | + | 0.439024 |
NA | HD0941 | conserved hypothetical protein | chromosome | CDS | 749465 | 687 | - | 0.432314 |
NA | HD0922 | conserved hypothetical protein | chromosome | CDS | 736465 | 1998 | + | 0.427928 |
NA | HD1528 | Eha protein | chromosome | CDS | 1264906 | 1206 | - | 0.453566 |
NA | HD0182 | conserved hypothetical protein | chromosome | CDS | 122281 | 540 | + | 0.296296 |
NA | HD1829 | probable outer membrane protein | chromosome | CDS | 1531604 | 1407 | - | 0.355366 |
NA | HD1736 | probable membrane protein | chromosome | CDS | 1448606 | 648 | - | 0.367284 |
NA | HD1751 | Conserved hypothetical protein | chromosome | CDS | 1462631 | 297 | + | 0.353535 |
SohB | HD0845 | putative secreted protease | chromosome | CDS | 671836 | 1056 | - | 0.381629 |
ccmD | HD0790 | cytochrome c maturation protein D | chromosome | CDS | 625421 | 204 | + | 0.323529 |
clpP | HD0221 | ATP-dependent Clp protease proteolytic subunit ClpP | chromosome | CDS | 160082 | 594 | - | 0.397306 |
comE | HD0434 | competence protein E | chromosome | CDS | 341162 | 1260 | + | 0.315079 |
dsrA | HD0769 | serum resistance protein DrsA | chromosome | CDS | 603357 | 774 | + | 0.370801 |
exbB | HD0329 | biopolymer transport protein | chromosome | CDS | 260970 | 453 | - | 0.368653 |
exbD | HD0328 | biopolymer transport protein | chromosome | CDS | 260536 | 390 | - | 0.325641 |
ffh | HD1999 | signal recognition particle protein | chromosome | CDS | 1662997 | 1353 | - | 0.392461 |
fimA | HD0281 | possible fimbrial major pilin protein | chromosome | CDS | 215687 | 567 | + | 0.368607 |
fimB | HD0282 | possible fimbrial structural subunit | chromosome | CDS | 216292 | 498 | + | 0.307229 |
fimC | HD0283 | probable fimbrial outer membrane usher protein | chromosome | CDS | 216833 | 2502 | + | 0.354516 |
fimD | HD0284 | probable periplasmic fimbrial chaperone | chromosome | CDS | 219386 | 741 | + | 0.350877 |
ftsY | HD0984 | cell division protein FtsY | chromosome | CDS | 778922 | 1560 | - | 0.376923 |
hhdA | HD1327 | hemolysin | chromosome | CDS | 1082511 | 3528 | + | 0.344671 |
hhdB | HD1326 | hemolysin activation/secretion protein | chromosome | CDS | 1080829 | 1599 | + | 0.329581 |
hofB | HD1124 | protein transport protein HofB homolog, pili/fimbriae biogenesis protein | chromosome | CDS | 892976 | 1395 | + | 0.374194 |
hofC | HD1125 | protein transport protein HofC homolog | chromosome | CDS | 894354 | 1194 | + | 0.327471 |
lepB | HD1607 | signal peptidase I | chromosome | CDS | 1327844 | 960 | - | 0.36875 |
lspA | HD0063 | lipoprotein signal peptidase | chromosome | CDS | 53810 | 486 | + | 0.349794 |
lspA1 | HD1505 | large supernatant protein 1 | chromosome | CDS | 1237841 | 12459 | - | 0.372582 |
lspB | HD1155 | Large supernatant protein exporter | chromosome | CDS | 921945 | 1770 | + | 0.369492 |
rcpA | HD1307 | rough colony protein A | chromosome | CDS | 1068170 | 1371 | - | 0.366885 |
secA | HD1788 | preprotein translocase SecA subunit | chromosome | CDS | 1496879 | 2718 | - | 0.387417 |
secB | HD0661 | protein export protein | chromosome | CDS | 524451 | 519 | - | 0.368015 |
secD | HD1752 | Protein-export membrane protein SecD | chromosome | CDS | 1462952 | 1845 | + | 0.402168 |
secE | HD1886 | preprotein translocase SecE subunit | chromosome | CDS | 1584021 | 417 | - | 0.40048 |
secF | HD1753 | protein-export membrane protein SecF | chromosome | CDS | 1464807 | 975 | + | 0.375385 |
secG | HD1277 | preprotein translocase SecG subunit | chromosome | CDS | 1040214 | 330 | + | 0.327273 |
secY | HD1957 | preprotein translocase SecY subunit | chromosome | CDS | 1639898 | 1320 | - | 0.364394 |
smf | HD1888 | smf protein | chromosome | CDS | 1586846 | 1143 | - | 0.392826 |
sppA | HD0878 | protease IV, signal peptide peptidase | chromosome | CDS | 700711 | 1857 | - | 0.371567 |
tadA | HD1304 | tight adherence protein A | chromosome | CDS | 1065246 | 1284 | - | 0.399533 |
tadB | HD1303 | tight adherence protein B | chromosome | CDS | 1064362 | 888 | - | 0.373874 |
tadC | HD1302 | tight adherence protein C | chromosome | CDS | 1063517 | 873 | - | 0.359679 |
tadD | HD1301 | tight adherence protein D | chromosome | CDS | 1062775 | 753 | - | 0.329349 |
tadE | HD1300 | tight adherence protein E | chromosome | CDS | 1062266 | 507 | - | 0.341223 |
tadG | HD1298 | tight adherence protein G | chromosome | CDS | 1059964 | 1689 | - | 0.315571 |
tatA | HD0716 | sec-independent protein secretion pathway component TatA | chromosome | CDS | 566002 | 225 | - | 0.351111 |
tatB | HD0715 | sec-independent protein secretion pathway component TatB | chromosome | CDS | 565510 | 489 | - | 0.380368 |
tatC | HD0714 | Sec-independent protein secretion pathway component TatC | chromosome | CDS | 564771 | 750 | - | 0.381333 |
tolB | HD1773 | colicin tolerance protein | chromosome | CDS | 1485947 | 1281 | - | 0.399688 |
tolQ | HD1777 | colicin transport protein, TolQ | chromosome | CDS | 1488881 | 681 | - | 0.367107 |
tolR | HD1776 | TolR protein | chromosome | CDS | 1488372 | 441 | - | 0.319728 |
yidC | HD0040 | 60 kD inner-membrane protein | chromosome | CDS | 37610 | 1611 | - | 0.392303 |