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COG category: Intracellular trafficking and secretion
Organism: Mycobacterium avium subsp. paratuberculosis str. k10, k10
Gene type: CDS

Number of genes found: 28

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# Mycobacterium avium subsp. paratuberculosis str. k10, k10

>MAP1829c hypothetical protein
MKAFKVSARTSGLLKRLNPRNRRSRTNPDATMSLVDHLTELRTRLLISLA
AIALTTIFGFFWYSHAIFGLESLGEWLRHPYCALPQSARAEISANGQCRL
LATAPFDQFMLRLKVGLTAGVVLACPVWFYQLWAFITPGLYQKERRFAIA
FVIPAVALFVAGAVLAYFVLSKALGFLLTVGSDVQVTALSGDRYFGFLIN
LLIVFGVSFEFPLLIVMLNTIGVLTYPRLKAWRRGLIFAMFVFAAIFTPG
SDPFSMTALGVALSVLLEFAIQIARLHDKRKAKREAQAVIPDDQASVIEP
PTAIPEPSLSAGQHDDVT
>MAP3461 hypothetical protein
MRTFIPPCRKRDSDGSEFVGRDSSAVGALQADGEAGVKALARTHQWIWVL
RHQPFTIRLLAAAAGLLTVASAFAAPAGAEGNGDDFIDALNHAGIDFGEP
GNAMAVGESVCPMLSQPGGNFAAVASSVAGRGMSPTMARMFTTIAIQTYC
PQEMANIASGNLSGAMPQVPGMPGQLPAMAGQIPGMAGQTGQLPTMPGQL
PSF
>MAP1213 hypothetical protein
MPHARRGALANIRAGAGRCGGPHRPSVPGDARRGRAGRGADQLADRFPGV
AERAVFLVVSVLLLVVVRPPLRRRLTPAAVPQLGIVALEGKTALVLERVA
RDRGQVKLDGQVWTARPLDENDVYEPGEPVTVMQIDGATAVVFKSSL
>MAP1680c hypothetical protein
MNARRLARLVGISVVTTWALLSAPVGNPVAAADPCSDVSVVFARGTHQEP
GLGNIGQAFVDSLTSQLGGRSVDVYAVNYPANDDYHNSANAGADDASAHV
QDTVAACPNSRIVLGGYSQGSTVIDLATNAMPPSVADHVAAVALFGEPSS
GFSTMLWGGQPLPTINPLYGGKTISLCAPDDPICFGGGNIMAHVSYIDAG
MTAQAATFAANHLNQGSPRT
>MAP1830c hypothetical protein
MGSLSPWHWAILAVVVILLFGAKKLPDAARSLGKSMRIFKSELREMQSEN
KTETSALGAQSESSAANPTPVQSQRVDPPAPSEQGHSEARPAS
>MAP4347c hypothetical protein
MDLLFDFFSLDFVYYPVSWIMWVWYKLFAAMLGPSNFFAWALSVMFLVFT
LRALLYKPFVRQIRTTRQMQELQPQIKALQKKYGKDRQRMALEMQKLQRE
HGFNPILGCLPMLAQIPVFLGLYHVLRSFNRTTGGFGQPHLSVVQNRLTG
NYVFTPTDVGHFLDANLFGAPIGAFMTQRTGLDAFTYFSRPAVIAVGLPV
MILAGVATYFNSRASVARQSPEAAANPQTAMMNKLALYVFPLGVVVGGPF
LPLAIILYWFANNIWTFGQQHYVFGMIEKEDEAKKQEAIQRRAANAPAPG
AKPKRNLKAGAGNGVDADAAQPDAGATEGQAGGGSDAPSRTPRPGARPKK
RKR
>MAP3836c hypothetical protein
MQLKHLTIAELVAGAGGDPWEVNRTLQAGRPAQIERLAEAFHGAGRHTAE
SDHAFAQAQQRFNAAWNHQDGGPNPINSSAEVQRTVKSLGAQSEQLPKIG
ADLENIAAALSEAQKSGAAEIATLEGQLEQLDHMIDLAEQDLRDHPDAAS
QQELHAIIKALRTAAVNDTKDALGQLHATRDSYSSSLRKAQTNLANDGYD
PTSTFGADAHEAETPDQARQDVTDALAGDKGAASRVNGVLNSITPDQLAG
KVPLTAEQASVLSQLQAQEHGMSMDALKTAEQRLGDEKGVIGNSLQLMSN
PNLMFPQTPLSIGAKQGTDMVKGGANQLPTSVQQLLNSPRPDLRHLNQLA
DIVKDGNHTFQANTDLDRGMVKQASTLMNSPFWRAGEGGPGDLNPGIDPT
VSNVLSAASPDHQVVHDAMTTGDHDRFLQNLTHHSWQDHGQAVSSLFSWT
GDATQGPEASIAAQTAHAYSTYIGHHQQDLLNLPGNHTLGQVNPNLVQGM
AHGLGPYVDNIAGTTGGLPGFGDSLDNEGDTRSGALPVAKGVFSVLNSDQ
AAGQYFNGQAYAHAVAHEAAFGNEPTHSGYDTQLYDAATLKGLVDVGTHN
AYHANEVNGYHQQLSEYELKKQAYEAGLTGLGTVAGLPPGVGTVANPALN
VLGHGLENSILGPAPSAPGENPIQPMDIGVADQGMANAMLAAGHNVQLPD
GYVVYDDQHPHGRLATLDEARAKFPGLTASQYDGVIGPALSHAIALPPEE
KMSPDEWMAIRYDNVVGVPHADQGRPK
>MAP2961c hypothetical protein
MTPADPRALRAWAYLSRVAEPPCPGLGALVRRVGPVEAADRVRRAAVDDA
LAKHTEARREIDRAAADLELIARRGGRLVTPDDDEWPVLAFAAFGAAAPR
PPGTAPMLAPLVLWAQGPARLDEVAHRAAAVVGTRAATAYGEQVAGDLVA
GLVQRDVAVVSGGAYGIDGAAHRAALDCDGVTVAVLAGGLDVAYPSGHSA
LLHRIGQHGLLFTEYAPGVRPARYRFLTRNRLVAAMAGATVVVEAGLRSG
AANTAAWARALGRVVAAVPGPVTSSASAGCHALLRNGAELITRAEHVVEL
IGHIGELAAEEPHPVTPLDGLGEAERRVYEALPGRGAATVEQLAAGCGLL
PEQALGPLAMLELAGLVRRQDGRWRIVRTAAGPAPPPA
>MAP0218 hypothetical protein
MPTNARRKRRRTLAWIAALSVAGVVLLVIVAAVVVLRGREAPPSAVPPGV
LPPTSTTGHPHKPRPASQDASCPDVLLVNVPGTWESAPQDDPGNPLQFPN
ALLHKVTASLTEQFPPSRLQAYTTPYTAQFHNPLSGDTQMTYNASRAEGT
RATVAAMTDMNNKCPLTSYVLMGFSQGAVIAGDIASDIGNGRGPVDDDLV
LGVTLIADGRRQQGVGNDIGPNPPGQGAEVTLHEVPILSGLGLTMTGARP
GGFGDLNAKTNEICAPGDLICAAPEEAFSVANLPATLNTLAGGAGQPVHA
LYATTQCWSLDGVPATDWTLNWAHGLIANAPQPKHG
>MAP1042 hypothetical protein
MESLILFLPFLLIMGGFMYFASRRQRRAMQATIELHESLRPGDRVHTTSG
LQATVVGLTDDTVDLEIAPGVVTTWMKLAIRDRIVPDDEDDLVDGDDSAG
EGSVSKDS
>MAP2473 hypothetical protein
MINLKRAVLLLPVYIAAMIAVDVVFKSAHIAPSKPLPVWIVAGFIASAIV
VVAVGIWYITQRRSSKVTRKREHAYIAIMAGVAVSGFVGDTVSGLAGLFM
GGKSLWVMVPSYALAYVVLLWTIAFTAKALDGGAGNVNKRSGSAH
>MAP1223c hypothetical protein
MLPPRPRTHTTLLTLAAVCSITALVAAVCLLPRAATPAQQPTPPPVLAPI
DLPAASAIGPGAGIYVDYTDGSGGMGCTAGFLVHTSSGQAGILTAGHCNR
PGEPSKVTMNLGGVLPYATLGTFSQTISEGVHDEQHDIGLIILDGDNVPQ
SPAIAASVPVSGVAANLQVGQQLCKFGMGSGADACGQIVEITGSKVKFLA
GGQCGDSGGPVYRYENDGTVSAVGILIRGGDPYTRKAGCAARAKFSVAEL
VRPWLDTWRLTMVTAPSAPR
>MAP4137c hypothetical protein
MPARTPTPVRDRWLRLTVAPAAALLLAGCSSTANPPAGSSTTTTKSTATT
SAGAAPTTGSGGASTTASIEIGNTINYGSMGTTTTLDCAGGKSLNVGGSD
NTLTVTGTCESATVSGTNNKITFDKVNTRITVLGMNNTITYKDGDPKVDK
IGQSNTINKGG
>MAP2554c hypothetical protein
MLGSLSWEHMLVLVVVGLVVLGPERLPGAIRWTSNALRQARDYLSGVTTQ
LREDLGPEFDDLRVPLSELQKLRGMTPRAALTKHLLDGDDSFLTGAFDRP
VNGAAAQPPPAPAPPPEPHRSGQTPFDADAT
>MAP2281c clpP, ClpP
MSDMRSPSQGLNLTDSVYERLLSERIIFLGSEVNDDVANRLCAQILLLAA
EDPTKDISLYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFL
LAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQAEQFHVIKKEMFRL
NAEFTGQSIERIEADSDRDRWFTAQEALEYGFVDHIITRAATITNGEAQ
>MAP2280c clpP2, ClpP2
MNPQIQPQARYILPSFIEHSSFGIKESNPYNKLFEERIIFLGVQVDDASA
NDIMAQLLVLESLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTV
CLGQAASAAAVLLAAGTPGKRMALPNARVLIHQPSLQGVIQGQFSDLEIQ
AAEIERMRTLMETTLARHTGKDAATIRKDTDRDKILTAEEAKDYGIIDTV
LEYRKLSAQTA
>MAP2983c ffh, Ffh
MFESLSDRLTGALAGLRGKGRLTDADIEATTREIRLALLEADVSLPVVRA
FVTRIKERAKGAEVSGALNPAQQVVKIVNEELIGILGGETRQLAFAKTPP
TVIMLAGLQGSGKTSLAGKLAAWLRGQGHTPLLVACDLQRPAAVNQLQVV
GERAGVPVFAPHPGASPESGPGDPVAVAAQGLAEARAKHHDVVIVDTAGR
LGIDDELMAQAAAIRDAIDPDEILFVLDAMIGQDAVTTAEAFREGVGFTG
VVLTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMSSRI
LGMGDVLSLIEQAEQVFDAEQAEAAAVKIGSGELTLEDFLEQMLAIRKMG
PIGNLLGMLPGAGQMKDALAAVDDKQLDRLQAIIRGMTPEERADPKIINA
SRRLRIANGSGVTVSEVNQLVDRFFEARKMMSSMLGGMGIPGLGRKSATR
KAKGAKGKAKKGKKGARGPTPPEVRSPLGPGMPAGFPDLSQLPEGLNELP
PGLADFDLSKLKFPGNK
>MAP2971c lepB, LepB
MTDTADSSNPQSHAGDADPKVSTRNPDTRPDDDAGAPAPVPEPGTKPDAA
APTEGSKRSTLREFAILAVIAVLLYYVMLTFVARPYLIPSESMEPTLHGC
TGCVGDRIMVDKVSYRFGAPRPGDVIVFKGPPSWNLGYKSIRSNNTALRW
AQNALSFVGFVPPDENDLVKRVIAVGGQTVQCRAETGLTVNGKPLREPYL
DRNTMAADPSVYPCLGSEFGPVTVPAGRLWVMGDNRTHSADSRAHCTSVP
AEALKGVLCTGDPASGTVPVSNVIGKARFIVWPPSRWGGVGSVNPQQGQ
>MAP1250 lspA, LspA
MSVPEQPTGSTAPHDRPPRRLRLLLSVAATVLALDIVTKVLAVKLLPPGQ
PVPIIGDTVTWTLVRNSGAAFSMATGYTWVLTLIATGVVVGIFWMGRRLV
SPWWAVGLGMILGGAMGNLVDRFFRAPGPLRGHVVDFLSVGWWPVFNVAD
PSVVGGAILLVVLSIFGYDFDTVGRRKKADQSRD
>MAP3354c secA, SecA
MLSKLLRLGEGRMLKRLKRVADYVNTLSDEVEKLTDAELRAKTDEFKKRH
ADGESLDDLLPEAFAVAREAAWRVLDQRPFDVQVMGAAALHFGNVAEMKT
GEGKTLTSVLPAYLNGIGGKGVHVVTVNDYLAKRDSEWMGRVHRFLGLDV
GVILAQMTPDERRVAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQRGHN
FAIVDEVDSILIDEARTPLIISGPADGASNWYLEFARLAPLMEKDVHYEV
DLRKRTVGVHELGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFHR
DKDYIVRDGEVLIVDEFTGRVLYGRRYNEGMHQAIEAKEHVEIKAENQTL
ATITLQNYFRLYDKLSGMTGTAQTEAAELHEIYKLGVVPIPTNKPMIRTD
QSDLIYKTEEAKYIAVVDDVVERYQKGQPVLIGTTSVERSEYLSRQFQKR
RIPHNVLNAKYHEQEAGIVAVAGRRGGVTVATHMAGRGTDIVLGGNVDFL
TDQRLRERGLDPVETPDEYEAAWHEELPKVKAEAAAEAKEVIEAGGLYVL
GTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRRFNGAALEAML
NRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEVMNQQRK
VIYAERRRILEGENLKEQALEMVRDVVTAYVNGATAEGYAEDWDLDALWT
ALKTLYPVGIDYATLTRRDADGGFDDLTREELLEALLKDAERAYATREAE
LEEIAGEGAMRQLERNVLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDP
LVEYQREGYDMFMAMLDGMKEESVGFLFNVTVEAVPAPQVAPVQTPEGLA
ELGAPAEQGGTATAARDEAPTQLRAKGIDNEAPAMTYSGPSEDGSAQVQR
NGGDAKTPAGVPAGASRRERRAAARQQGRGAKPPKSVKRR
>MAP1534 secA2, SecA2
MPKTNRAQPGRLSSRFWRLLGASTEKNRSRSLTLVTDSSEYDDEAAGLTD
EQLRKAAGLLNLEDLAESEDIPQFLAIAREAAERATGLRPFDVQLLGALR
MLAGDVIEMATGEGKTLAGAIAAAGYVLAGRHVHVVTINDYLARRDAEWM
GPLIEAMGLTVGWITAESSSEERRAAYGCDVTYASVNEIGFDVLRDQLVT
DVADLVSPNPDVALIDEADSVLVDEALVPLVLAGTTHRETPRLEIIKLVG
ELEAGTDYDTDADSRNVHLTDVGARKVEKALGGIDLYSEEHVGTTLTEVN
VALHAHVLLQRDVHYIVRDDAVHLINASRGRIAQLQRWPDGLQAAVEAKE
GIETTETGEVLDTITVQALINRYATVCGMTGTALAAGEQLRQFYKLGVSP
IPPNKPNIREDEADRVYITAAAKNDAIVEHIIEVHETGQPVLVGTRDVAE
SEELHERLLRRGVPAVVLNAKNDAEEAQVIAEAGKFGVVTVSTQMAGRGT
DIRLGGSDEADHDRVAELGGLHVVGTGRHHTERLDNQLRGRAGRQGDPGS
SVFFSSWEDDVVAANLDRNKLPMETDPETGDGRIVSPKAAGLLDHAQRVA
EGRMLDVHANTWRYNQLIAQQRAIIVDRRNTLLRTATAREELAELAPKRY
RELADEIPEERLETICRHIMLYHLDRGWADHLAYLADIRESIHLRALGRQ
NPLDEFHRLAVDAFASLAADAIEAAQQTFETANVLEDEPGLDLSKLARPT
STWTYMVNDNPLSDDTLSTLSLPGVFR
>MAP1043 secD, SecD
MASSSVPVHPARYLSVFLLLLVGVYLLVFLTGDKRAAPKLGIDLQGGTRV
TLTARTPDGSAPSREALAQAQQIISARVNGLGVSGSEVVVDGDNLIITVP
GNDGNEARNLGQTARLYIRPVLNSMPAQSGEPKPAPRQPAQPAPGQPAPG
QPAPAPGQPAPAPGQPAPGQPVPAPAQPGAAPAQPRPYPQDPPPSPSPAP
APAPAPGPAPAPAPAPSPGEAPPGEQPAPPDPRKDLAERIAEEKKWRQST
RQGIQFLALQFQATRCDKDDILAGNDDPAQPLITCSTDHKVAYLLGPSII
SGDQIKDASASQNQRGIGFVVDLQFKPAAANTWADFTAAHIGTQTAFTLD
SQVVSAPMIQEAIPGGRTQISGGDPPFTAATAKQLANVLKYGSLPLSFQS
SEAQTVSATLGLTSLRAGLIAGAIGLLLVLLYSLLYYRVLGLLTALSLAA
SGAMVFAILILLGRYINYTLDLAGIAGLIIGIGTTADSFVVFFERIKDEI
REGRTFRSAVPRGWTRARKTIVSGNAVTFLAAAVLYFLAIGQVKGFAFTL
GLTTILDLVVVFLVTWPLVYLASKSPTLAKPAYNGLGAVQQVARERRAAA
HVSTGQG
>MAP4110 secE, SecE
MSDEGDVANDAASDGADTTDDRAGGGRTAVVTRPQRPTGKRSRQRAAGDA
DAEPSDEAEVSAPEKAEKAKRKKAAKPKKSADTRANPFVFVYNYLKQVVA
EMRKVIWPNRKQMLTYTSVVLAFLAFMVALVGLADFGLTKLVLLVFG
>MAP1044 secF, SecF
MTSSKASKAAKGATEITETSSGASELTDSDAAAAGLPRHSFLSRLYTGTG
AFEVVGRRRLWFGISGAIVAVAILSIALRGFTFGIDFNGGTTVSMPAAGT
HGTVHTAQVQEVFRKTLGTDPESVVVVGNGAAATVQIRSETLTNDQTTKL
RNALFDAFGPKGADGKPSKQAISDSQVSETWGDQITDKALIALVVFLALV
GLYITVRYERYMTLAAIAAMFFDLTVTAGVYSLVGFEVTPATVIGLLTIL
GFSLYDTVIVFDKVEENTRDFQHTNRRTFAEQANLAINQTFMRSINTSLI
GVLPVLALMVVAVWLLGVGTLKDLALVQLVGILVGTYSSIFVATPLLVTL
RERTELVRTHTRRVLKRRAGGARASAESTADDAAEPPAGSGDEATEAERE
SRSSRPAPSKPAPGARPVRPTGARRPTGKRNVGRR
>MAP1167 secG, SecG
MQLALQITLVVTSILVVLLVLLHRAKGGGLSTLFGGGVQSSLSGSTVVEK
NLDRLTLFITGIWLVCIIGMALLIKYR
>MAP4198 secY, SecY
MLSAFISSLRTVDLRRKILFTLGIVVLYRVGAALPSPGVNYPNVQQCIKE
ASGGAAGQIYSLINLFSGGALLKLTVFAVGVMPYITASIIVQLLTVVIPR
FEELRKEGQSGQAKMTQYTRYLAIALAILQATSIVALAANGGLLQGCSLD
IIADQSIFTLVVIVLVMTAGAALVMWMGELITERGIGNGMSLLIFVGIAA
RIPAEGKTILDSRGGMIFAAVLVAALIIIVGVVFVEQGQRRIPVQYAKRM
VGRRMYGGTSTYLPLKVNQAGVIPVIFASSLIYIPHLITQLIRSGSGGVG
NSWWDKFVGSYLSDPSDPVYIGIYFGLIIFFTYFYVSITFNPDERADEMK
KFGGFIPGIRPGKPTADYLRYVLSRITLPGSIYLGAISVLPNLFLQIGNG
GAVQNLPFGGTAVLIMIGVGLDTVKQIESQLMQRNYEGFLK
>MAP4188 sppA, SppA
MFAVLSSIPGLSKGADEIRALAGRVDTARHHGVPNGCVLELDLRSMPPET
SGFDPLALVTGGSRPASLRDTVDAIHRAAEDPRVAGLIARVQLAPSPSAA
VQELREAIVAFTAAKPSLAWAETYPGTLSYYLASAFGEIWMQPGGSVGLI
GFASNATFLRDALDKAGIEAQFVARGEYKSAVNRFTEHGFTEAHREAVTR
MLDSVQEQVWQAVAESRKLDTDALDALADRAPLLRQDALDSGLVDRIGFR
DQAYDRIAELVGVQDVSPDTEPPRLYVSRYAGAARSRLSPPVPSLPGRRR
PPTVAVINVDGTLVDGRGGPHFLPFGAATVGSDTIAPALREAAADDAVSA
IVLRVNSPGGSVTASETLWREVKRARERGKPVVASMGAVAASGGYYVSVA
ADAIVANPATITGSIGVITGKLVIRDLLGRLGVGSDTVRTNANADAWSID
APFTPEQRAHREAEADLVYTDFVSRVAEGRNLTTDAVERVARGRVWTGAD
AHERGLVDELGGFRIAVRRAKILAGLDEDADVRIVTYPSGSLLDVLRPRA
SSQPAAVSLPDALGALTVKTLGAILDNVERSCSGASALWLGPSRL
>MAP0416 trbB, TrbB
MLGDTEVLANLRTLQTELTGAGILEPLLCADGTTDVLVTAPDAVWVDDGN
GLRRSEIRFPDEAAVRRLAQRLALAAGRRLDDAQPWVDGELTGIGAGGFA
VRLHAVLPPVAAAGTCLSLRVLRPASQDLAALSAAGAIEPAAAALVADII
AARLAFLVSGGTGAGKTTLLAAMLGAVPPDERIVCVEDAAELAPPHPHLV
KLVARCANVEGVGEVPVRQLVRQALRMRPDRIVVGEVRGAEVVDLLAALN
TGHDGGAGTVHANNPGEVPARLEALGALGGLDRAALHSQLAAAVQVLLHV
ERNRAGRRRLSEIAVLQRVQERVRSVTVWHADRGMTEAAPLLRRVLENRM
PS