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# Borrelia burgdorferi B31

>gid:13073  BB0031  signal peptidase I (lepB-2)
MYLRRLDKFASFLVHIVEKYLTYRKRKKYFCKLRAKKRGFLLNFLFDFVA
AAIFVLVINQYFVQAYKIPSGSMENTLQIGDFLFVDKFSYGPELLPGLFK
INGFKAPEESDIIIFENPEYKSKGVFFDIFQRILYMLTLSFIDLDRDEYG
NPNVRFLVKRGAFADGKIVRFNNGKAYIKREGEENFILEDSYWDLVDKNF
KIKKIVANEDYGIYGDFAMFVALSQLNINLSSTPDFSFFDVRMIDRFEFE
RLEYKYLSAFMPYVDYYMEKAIMRDYGIYVPDGYILPIGDNRDNSHDGRF
FGVINKNKVLGRTLIIYLPFSRVGFI
>gid:13118  BB0076  cell division protein, putative
MGILEKIKNLFKSKQQENVIENLEDILLESDINNEIVIEIINKLTKEKNE
NEKTIIGKLKELLSSYINTKKFTLENNKLNILLIVGINGIGKTSSIAKLA
NKLKNEGKNILISAADTFRAAAIEQMKIYGEQIGVRIISQNQGSDPSAVI
FDSISSAKLKNYDALIIDTAGRLQNKENLIKELQKINNVILKQIKNTDIN
YQKILVIDSTIGKNANSQAEIFNKAIEIDGIIITKLDSSSKAGTILNISK
ILEKPIYFTTFGEKLEDIKEFDINEYFNKLL
>gid:13183  BB0142  B. burgdorferi predicted coding region BB0142
MKILIKFYNFKVLIFIIRGLQIKKIFLIFITVSFSFAEIIQISPKQAVNM
ALENSLDSENALYKENIKKLYKNNAWNVFVPNVNLSSTLSRNPSALSELE
RDYWGFGFGVGINLSLSPSVLKRMQLVMLEYESAKIERESAVRNIKLNVL
KSYNQLIALKSTLKVFESQIQNSKLKFEQARIAYNNGLISEIDFLDAQLK
YKKSQPDLDGHIINFEKSKEIFKLLIGLDHDQDFEIIGELPDETIDFSLF
NEALNFNESLEIKDLNMRLKMTEQLIDSLWLDTYLPSLSLSFSYSPYKSF
HENSKGFSTGFLASFSLNYGLTEIFPFSKSFTKIQDNNYQLKILQNNVEG
KIRNLKSSIVQKRKDIRRYKAILDASKINVELANKNYQMAFNAFNSGVMD
LSKLNDIELVYKQSDLKFIEDKLNYANSILEYKNLINSLD
>gid:13195  BB0154  preprotein translocase subunit (secA)
MLKAVLETTIGSKSKRDLKDYLPTLRNINKLERWALLLADEDFSKETEKL
KDELKSGNSLENILERAFTLSREAARRRLKERPYDVQIIAGLALHKGKII
EMKTGEGKTLSSVQAAYLNSLTGDGVIIVTVNDYLAERDSNWMKPVFDLL
GVSVGVVLSNMDYELRKAQYAKDITYVTNNELGFDYLRDNMRYDLNEKSL
RKFNYCIIDEIDSILIDEARTPLIISGPTEGNTNAYLEVNSLVSFLKECS
KDPKTGDYPLEIDDLDGDYTVDEKAKRISFTAKGLNNLEQLLVSKGIISG
SMYTDSNFNYVHYMTQALKAHLLFLKNREYIVGDSGVEIVDEFTGRVLTG
RRYSDGLHQAIEAKEGVRVANENKTMATITFQNLFRMFDKISGMTGTADT
EAKEFHKIYNLDVVVVPTNRLLARIDEDDTIYYTEEFKFNAITDEVYKTY
KKGQPVLVGTVSIEKSEILSAMFKNRGIKHEVLNAKNHSREAFIIAEAGA
KHAVTIATNMAGRGTDIKLGGNIEHRVRKKIGTNVSLEEFQEAVKNEREN
YLKDYNEVKSLGGLYVIGSERHESRRIDNQLRGRSGRQGDPGRSRFYVSL
EDDLMRLFAGDNLRSLMGKLGMATGEPITHSLLTKSLINAQKRVEDRNFE
IRKHLLEYDDVITKQRDFIYAQRNSILEDTAIKDRILVALEEYLSFLLEG
TKSSTVSNVFLNEVNSIFAYMLESLGSIENISSLDLKAKLMQIAKANLDE
KENLIGRDLFNGFLRYEYLKNIDFKFQEHLANLDSLREAVYLRSYANKNP
ITEYKEEGFSIFSELIKDIKVSTIRRVLQLKLDSNSSDFKSTKKSRNVKP
IHKELSGIVINENKSASNVQVVRSSPKIGRNEPCYCGSGKKYKNCHGKS
>gid:13306  BB0263  signal peptidase I (lepB-3)
MRIFKAHKYELASILAACLFLITLIKLFLSFYIVKGESMTPAIFEKNWIV
NHKFAYGLRIKKHQKYLLLWKTPQKNEMVLIKDPITNKIAIKKIFAIPGE
KFKQIEKNTICIHDLNFKIDENILKKNTKKIPEDHYLVIGENKQISLDSR
DYGFIKIDNILGKIIYYF
>gid:13314  BB0271  flagellar biosynthesis protein (flhA)
MLDARKNSILGYLGLNNKSDLIISVGLIFVVAGFILPLPAVILDVLITVN
LVISLLIILIVLYSKRSLDFSVFPTLLLVMTIFGLVLNISSTRLILTKGI
NFDGQMIRTFGTFVVGSSGIQGLVIGFIIFIIIIAVQFIVITKGATRVAE
VAARFALDALPGKQMAIDSAYSSGNLTEEEATRQKNDLQSEVNFYGAMDG
ASKFVSGNVKVGFLITLINILGGLLVGITLQGLNFNEALNNYVSLTVGDG
LVSQLPSLLISTSTGLIVTRSISKNSFGGEIFDQFTNHLGIYWIVSGFLL
FLAFLPGFPTLILMFLSLSIAFLAYSLSGIRQKEEIDKKMKLEEEQASIY
SDKDVSPVVPLDPLALEIGYNLVPIVDDTKTSELLDRIVKIRREIAFEFG
IVVPKIRIVDNMRLEPNAYSFKLRGVEVGRGEIKLGKFLVINVGIDSGID
GDLVKDPSFGLPSLWVNDDGRETAEKLGYTVVDPPSIIATHMTELIKRHS
YEILTRQDVQNTLDVFKKDYGAIVEEVLKNFSVGEIQRVLQGLLKEQVSI
RNLVTIFETIADFTSITKDIFFLIEKCRQSVGRQITSGYLDLNSELNVIT
LNPSFEQMIIDSRVESNHDLISSIDPNLKTKFIYELFKIVNEVQAEGFYP
VVLSSESSRPIIKVITSREIPDLVVMSVLEVPQNIKVNVLKTVEVEE
>gid:13315  BB0272  flagellar biosynthesis protein (flhB)
MIKDEFLIKSWYIPLDFFSADDEGRTELPTDQKKQKAREEGRVLKSTEIN
TAVSLLLLFALFFFMLSYFALDLIAVFKEQAIKLPEVMRMSVYTMGFAYI
RSIMGYVVLFFFASLAVNFFVNIIQVGFFITFKSLEPRWDKISFNFSRWA
KNSFFSAGAFFNLFKSLLKVVIICLIYYFIIENNIGKISKLSEYTLQSGI
SIVLVIAYKICFFSVMFLAIVGVFDYLFQRSQYIESLKMTKEEVKQERKE
MEGDPLLRSRIKERMRVILSTNLRVAIPQADVVITNPEHFAVAIKWDSET
MLAPKVLAKGQDEIALTIKKIARENNVPLMENKLLARALYANVKVNEEIP
REYWEIVSKILVRVYSITKKFN
>gid:13316  BB0273  flagellar biosynthesis protein (fliR)
MYYWDEILNLNFLVLKSFTILPVLVRIFMFLKFSPFFSTIKIGYFNFFFS
LILSVIVVEKIKIIYPLDNMLSFALILLGEAILGLIQAFFVNIIFNVFHL
VGFFFSNQIGLAYANIFDVFSEEDSMIISQIFAYLFLLLFLSSDFLLRFF
VIGIHDSVLNIRVEHLVNMRNSGFVKLLLMSFGFLFEKALLISFPILSLL
LLFYLVLGILSKSSPQINLLIISFSTSLFLGLLILYIGFPSLAISSKRVI
ELSLDSLASFLKLFSRVLK
>gid:13317  BB0274  flagellar biosynthesis protein (fliQ)
MTAGHILYLIRISIENIIILSAPMLIIALIVGLLISIFQAITSIQDQTLS
FIPKIIVILLVIVIFGPWILNKLMQFTYMIFSQLQNV
>gid:13318  BB0275  flagellar biosynthesis protein (fliP)
MRKCFNFFLFFSVTSLSFAQTKSLQTTNGLNFPFLNFDSIGGSEIAFSLQ
LLILLTIITLSPAFLVLMTSFLRISIVLDFIRRALSLQQSPPTQIVMGLA
LFLTIFTMWPTFNSIYEQAYLPLKESKINFNEFYNKGIAPLRIFMYKQMS
DGRHEEIRLFMSMSNYDRPKNFSEVPTHVLIAAFILHELKVAFKMGILIF
LPFIVLDIIVASVLMAMGMIMLPPVMISLPFKLILFVMVDGWTLITSGLI
KSFM
>gid:13320  BB0277  flagellar motor switch protein (fliN)
MSVDEKSDNGEKPEIKGVKLPDLIDTLPEGVDPSNFGLLMDVSMQLTVEL
GRTERKIKDILGMSEGTIITLDKLAGEPVDILVNGKIVAKGEVVVIDENF
GVRITEIIKTKNE
>gid:13331  BB0288  flagellum-specific ATP synthase (fliI)
MSNFFENYLRQVDDIETVSFVGRVQKIKGLLVESLGPQCAIGDLCLIDQR
NGKKVCAEVLGFNGPYVSLMAYEGFSGIEVGNKVYSLNKGLEINLSDELL
GRVIDSLGRPIDNKGSFLNNSYKELIFEKINPINRSIFEDQILTGVKVLD
GFLPVAKGQRVGIFSGSGVGKSTLLGMIAKNSNADVNVIAFIGERGRELN
EFIEHELGEERLKKSVLVVSTSDESPISRYKGAYVATMIAEYFREQGKDV
ALLFDSITRFANAKREMSLSLGEPPVAKGYPPSVFVEIPILLERSGFNGN
GGSVTGFYTVLVEGDDFTEPVADNIKAVLDGHIILDRDLFDRGIYPSINV
LSSTSRSIHRIMSLEKQKLIMKARNLLSIYKDYEDLIRTGIYLKGSNKDV
DFAISKYPKIINFISQGINETFDFENLEDEIKEILS
>gid:13332  BB0289  flagellar assembly protein (fliH)
MPKVLYKSSEVDNLVKFEFVEIAKPVFESLEIKEKEGKVYDIESQISNLK
EELQLLRDEKLQLEEELAKRQELAKEEVQIESKRLIEEAKAKANEVLEAA
KQEADLLQKEAIYKKESIETESNAEIERLAREYEEKLKTDLEIAIAKGRE
EGYSKGYESGFEDFDKVMRKLHVIIASLIAERKGILESSSGQIVSLVMQI
AIKVIKRITDSQKDIVLENVNEVLKRVKDKTQITIRVNLDDLDIVRHKKS
DFISRFDIIENLEIIEDPNIGKGGCIIETNFGEIDARISSQLDKIEEKFK
NFSLLS
>gid:13334  BB0291  flagellar basal-body rod protein (fliF)
MSKFFTNFFVSAKGIFKKASTVQKIALGLIIFFVILALVFLIGFSTKSQS
IALFGVEIKDQYLLDRISQRLDRENVKYFLSSDGRIYLDDEKLAKKMRAI
LVREELVPVHMDPWALFDIDRWTITDFERSINLRRSITRAVEQHIVALDD
VDAVSVNLVMPEKALFKESQEPVKASVRITPRPGSDIITNRKKVEGLVKL
IQYAIEGLESDNIAIVDNSGTILNDFSNLDGIDRIDLAEKERKLKLKYEA
MLRGEIDSALSKVLSVDRFMIARVNVKLDTSKETTESKEYAPIELQSQDP
KASYNTRKVSDSTIISSQTQKKEYQGQGYSPWGPPGQEGNTPPEYQDLSD
ITGKYNESQEIKNVALNEKKSTSEKEPARIVGVSLGIFVDGIWNFVYDEK
GDFVIENGMRKREYKPMALEEIKNIEDVLQSSFEYKPERGDSITVRNISF
DRMNEFREIDENYFASERFKYFLFIASIVFSLLILVFTIFFAISRELERR
RRLREEELAKQAHLRRQQALMDGGDDIGVDDVVGGIREGDELQSNAELLA
REKPEDVAKLIRTWLLKNA
>gid:13335  BB0292  flagellar hook-basal body complex protein (fliE)
MVRTDAFFTENNINLVKKNPLHFDVNLFSSKSNAKDNDIKTFKDVLINSI
TDVNKSQLNVSKVTEQAILKPSSIDVHDVVIAMSKANMNLSILKAVVERG
VKAYQDIINIR
>gid:13340  BB0297  smg protein
MMKLLYIDNLKFLKGKEKLKLFNNFDFNNVIKLTQKDIESYFLKSFRRLF
KLPDLKLVELQEKVIQRTKAKVAILGSKSYPNKLKRIYDPPFAIYYKGNL
PDCSLLSWAVVGSRKISKTLAERTREFSSHLAKNGVEIISGFAIGADIEA
HIAAINENKRTFAVIPTDIDNIYPRQNRKYVSKLLEQGGGIITETLPFDK
IQNYFFAKRNRLVSGLSDAIFITYAPLKSGALITAELGLDLGLDVYVYDL
DFCGDGAVKLHDFGAQEIKTVKDLYALLNIKYVDSNNIEDDSKECCNCKN
VSDVLIGELLKEVCK
>gid:13438  BB0395  preprotein translocase subunit (secE)
MFRFIKDSILELKKVTWPKYNEVVGNGKQVFWLVLFVSIFLGIVDYLMFL
VVTYVF
>gid:13493  BB0442  inner membrane protein
MNQSRRILRTVYLSLFLIGLFMLINDIFSSNILSSKSSDKEVQFDLNKSF
DDNEMSSVKSNSFNLINKSQDIIVETGIYVATFSTFKGNLVSLKLKNHLN
LEKNPTDLINIDRKNETFFDISFDYFVDDLFLYKKIDDFNHEFKAYFKNN
GKTYEYVKKYTFSKKDEYLMQFKVTVNGLEDYNLFDFDSYKIIFSSEIER
LSDKAKLQYNNYLSQIIYYDNKLKYGKDGLRINNPRWIGSSTKYFGVLVS
KENMEVEFKKERGTLKSFIINNVRNKKNISDEFFIYAGPKDNRYLDVFDK
RDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVMQVFYDVIPNWGLSIIFL
TIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKFKHDPKKLNEEMGRL
YKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSI
GDSVYHFGYKLYFVSWTDIRILPFIMMFTQLGSTIVSSNMDLKNLGAQQK
FLYFGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIKMHLS
>gid:13521  BB0469  signal peptidase II (lsp)
MSAKSKQYFNIFVFIISLIFFDQLSKYLVAKYVKLGSIYFSFFDDFFRII
HVRNTGILFSMGSNIHYSLKKIFFLAMPIFILIFVFYLSLKERNCIARIS
LLLIFSGGVGNVIDRLFRPSGVVDFLDLKFYGIFGLDRWPTFNFADSYVV
IGMILFLVYDFFIKRKVLNK
>gid:13550  BB0498  preprotein translocase subunit (secY)
MKELFLSLFTVKDLRNKFLFTLFVLFLFRVGSYLPIPGIDSVALKSYFKS
QSDFSIANYFDFFSGGAFSNFSIFMLSIGPYISASIIVQLLVYSFPSLKK
MQEGDGGRQKTKKYTKYLTIVAAVVQGYATSLYAKGIPGAVTIPFYRYIF
VAILTVTTGTFILLWFGEQINQRGVGNGTSLIIFSGIVVRLQAALFNLFQ
SMQDPSQNVNPVFVILIISIFILVVILIIYEYKAQMRIAIHYARANSNNT
VSSYLPIKLNPSGVLPVIFASVLITLPLQILSGFAETSSIARQILSYLRP
NGFYYTFLNVILIIGFTYFYSKIQLSPKDISNNIRKNGGTIPGIKSDEME
KYLDEIMNKTLFSGSIFLSIIAIIPFLVQNIFRFPHDVSRIMGGSSLLIM
VGVALDTLIHIDAYLKTQGFSHGNKKNYAFLQKI
>gid:13603  BB0550  flagellar protein (flaJ)
MIAKEKIYKQTQVNTSNPLSILIMLYEKAIQDLKVAKELIKDENWQNAVK
ANEKIFHAQEIITELMSTLNFEQGGNISTNLLSIYLFLNKELENVLLKKE
IHKIDNVIKQLQILSFAWKKLSKKENNITQSNNVTQSKLGINIVG
>gid:13666  BB0611  ATP-dependent Clp protease proteolytic component (clpP-1)
MEFMHNLIPTVIENTGNYERVFDIYSRLLRERIIFLSGEINDPKADTVIA
QLLFLESEDSSKDIYLYLNSPGGSITAGLAIYDTMQYIKPDVRTICIGQA
ASMGAFLLAGGAKGKRESLTYSRIMIHQPWGGISGQASDINIQANEILRL
KKLIIDIMSNQIGVDKEKLALDMERDYFMTSSDALKYGLIDSILVRE
>gid:13709  BB0651  conserved hypothetical protein
MYSMGGFVFLLQEFSGNSSFLRSLLVFVPVIAIFWFLVISPQRKEEKNKK
EMIKNLKKGDKVLTIGGIFGVVKKLGDTDVILELSPNNEAVFIKNSIDKV
LSEKK
>gid:13710  BB0652  protein-export membrane protein (secD)
MKKGSKLILILLVTFFACLLIFPTLKWYFLMSVEDKKISSYSQEALRDYS
KKKALNDLVKLKELYNKDPNSSIPASLSYLIPIAKNNYRSSMKIPPNIFT
AKTLREGFLTDSDMGEVSLEIYRYYENIKKGKSRIIHLGLDLSGGMSVTI
SLDYSSVEKKLGRSLTFAEREDAIYRIMQILKDRVBRFGLTEPKIVREAG
GNKIFLDIPGEKDESRVSTLLSGKGNLTFYVVDDESTSLLHRKILEAGSL
FSIPEIQASMNLPDSKQIFPWYVKDSYGVDDESSVRYYVVDASPENSFDG
AHIKDAGVSNDPRTGRDTVAFSLDVDGSEKFFKFTQKNVGKSLAVVMEGK
IKSVAGIGYAITGGNVSIQGDSFDKKEAQDLALVFKTAAFPVDIKIDDLR
IIGPTLGARTIDLGIKASALALCLVFLFICVYYGLSGVVAGFSLVIYNVF
LILAILSAFNFTLTLTSIAGLILTMGMAVDINIVIYERIKEEIREGRRFE
NAFEAGFKKAFLSIMDANITTFIAVLFLTLLGTGVIQGFAWSLSVGIVAS
LFSSLIFSRFILEFIISVRKSKFISISWSSKYAKSN
>gid:13711  BB0653  protein-export membrane protein (secF)
MQRVINFSKYGSNVLIVSAVLILVGLIYTFFYHGGYNWGIDFSSRVNINL
SIEKSNIKENEIKKIFSPIYKTLDVNSIFSPDQNKSEFSIMVKSDVIDYA
FKTEVQKTILDKLKETFDANIEVLDSYFIDSSFSSTLRIRSIFLVLGTFI
LILIYITLRFKLSYAIASILSIFHDIFFIVAFLGVFRIEINSYIIVAILT
IIGYSLNDTIIIFDRIRDNVKRLTDNTFLNVLNISISQTLSRTVLTSVTT
FVAVFSIYVFTEGSIKDFSLVFMVGVIVGTYSSVFIASPILLNLYKKIK
>gid:13753  BB0694  signal recognition particle protein (ffh)
MFLMLESLGSNFRNFINYLSGKSTINDKNIAEAIEIIKNSLVDADVNLRV
IRRFLNSIIEESKGVKVLRGIDPKSQFIKIVNDNLVKFLGGKNYELSLHP
ANKQSYILMLGLQGSGKTTTCAKLSLKLKKENRKVLLVAADTFRAAAVEQ
LKILGGQVGVPVFSIEGEKDPIKIVKASMKFAESNFFDSVIVDTRGRLEI
ESLLVEEIKKIKGILRPAETILVVDSMMGQVAVNIAKEFNENVGLTGAIF
SKFDSDTRGGAVLSFKSICAVPIKFIGVGEKIEDLDSFYPERIASRILGM
GDVVSLVEKVQSVVDKEEAIKLEEKINKASFNFEDYLSQFRRIRQVGGFS
NFVSFLPGVSKSMLNSNNLNEESFNKEEAIILSMTKKERINPVILNNPSR
KKRIAMGSGTTVFDVNKLIKKFSQATLIMKKMKNKDFQNKIASLLGK
>gid:13819  BB0757  ATP-dependent Clp protease proteolytic component (clpP-2)
MFLYKGCFMTGKEDNDACVLHDKSLKLVLKSRSIVIAGEITKDVSRLFQE
KILLLEALDFKKPIFVYIDSEGGDIDAGFAIFNMIRFVKPKVFTVGVGLV
ASAAALIFLAAKLENRFSLPFARYLLHQPLSGFKGVATDIEIYTNELNKV
KKELNNIISKETGQKISKIEKDTDRDFWLDSSAAKKYGLVFEVVETKYQL
EEFISA
>gid:860287  BBA01  conserved hypothetical protein
MKKIFTLILIFGLTIQIFATKDTQNRIEKGIESFNKYDKEKKNPIGPFLL
NLFLPFGIGSFVQGDYIGGGSVLGFNLLGAILWGTGIILNHRETQLTGYI
LIGVGASMVLTSYTVSLIIPFTFANRHNENLKKRLSAELAGFEPNFDLGI
NGFQLSFKKSY
>gid:860387  BBB14  conserved hypothetical protein
MILYQNQLKFLKLLVFFLLISCTSLNVEHDQFGKTFRIYQSLNKNAELKG
IFNYKTGITKIVLYTRFRNHSITEQNPLLLLDGTKIEGKVSYKRDNNHFF
GNWINYSSFVLTKSLLERMIKEEDASYKNKEVKIRIGLEDLSLKKYKILD
FLVMVESIENKDYKS
>gid:861007  BBQ06  conserved hypothetical protein
MQIFAQEKLEKGVGDIATVMKYESKKATILAPLLLNIFLSLGIGSFVQGD
YIGGGALLGSQVLGGILIMAGYMTGDIGFVTESTATVITGGVLSGIGGLT
IAASYITGIIIPFKFANRYNADLKKRLGIALAGLEPNFDIGINGDSNYRL
KNPIEYQFTWG