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2024-05-06 06:11:28

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Chromobacterium violaceum ATCC 12472, ATCC 12472

Number of genes found: 158

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Chromobacterium violaceum ATCC 12472, ATCC 12472
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA CV0768 probable outer membrane multidrug resistance lipoproteinchromosome CDS789557 1431 - 0.682041
NA CV0710 probable outer membrane multidrug resistance lipoproteinchromosome CDS736207 1440 - 0.722917
NA CV3133 probable flagellar protein FliJchromosome CDS3417145 384 - 0.651042
NA CV2729 probable multiple antibiotic resistance protein MarCchromosome CDS2958536 702 - 0.662393
NA CV0311 probable RTX (repeat in structural toxin)chromosome CDS318745 12393 - 0.655612
NA CV2594 probable type III secretion proteinchromosome CDS2802580 807 - 0.464684
NA CV0308 probable agglutination proteinchromosome CDS314316 1422 - 0.654712
NA CV3127 probable flagellar biosynthetic protein fliPchromosome CDS3412846 753 - 0.608234
NA CV3560 conserved hypothetical proteinchromosome CDS3867074 474 - 0.696203
NA CV0482 conserved hypothetical proteinchromosome CDS510213 3123 + 0.643612
NA CV1734 probable outer membrane proteinchromosome CDS1875793 1230 + 0.582927
NA CV3475 hypothetical proteinchromosome CDS3768015 1749 + 0.459691
NA CV2912 hypothetical proteinchromosome CDS3189528 2703 - 0.694784
NA CV0780 hypothetical proteinchromosome CDS805542 543 + 0.707182
NA CV3115 probable type-4 fimbrial biogenesis pily1-related proteinchromosome CDS3401231 3234 + 0.667594
NA CV2848 probable outer membrane component of multidrug efflux pumpchromosome CDS3103324 1404 + 0.742877
NA CV2872 probable hemagglutininchromosome CDS3139314 7122 - 0.644201
NA CV0484 probable type IV prepilinchromosome CDS513782 558 + 0.657706
NA CV2869 probable hemagglutinin-related proteinchromosome CDS3124394 2808 - 0.582621
NA CV3808 conserved hypothetical proteinchromosome CDS4107101 585 - 0.705983
NA CV2927 conserved hypothetical proteinchromosome CDS3206632 423 + 0.666667
NA CV3687 probable signal peptidase Ichromosome CDS3988898 669 + 0.665172
NA CV2873 probable hemolysin activator proteinchromosome CDS3146472 1689 - 0.697454
NA CV1471 probable adhesinchromosome CDS1566002 3132 - 0.588761
NA CV1469 conserved hypothetical proteinchromosome CDS1561058 3033 - 0.609627
NA CV3838 probable outer membrane drug efflux lipoproteinchromosome CDS4140532 1431 + 0.72956
NA CV1297 conserved hypothetical proteinchromosome CDS1365748 1014 + 0.607495
NA CV3540 probable fimbrial biogenesis and twitching motility proteinchromosome CDS3848693 783 - 0.621967
NA CV1878 probable ATP-binding component of a transport systemchromosome CDS2039099 2574 + 0.679487
NA CV3348 probable exbB-like biopolymer transportchromosome CDS3644576 615 - 0.669919
NA CV1455 probable multiple antibiotic resistance protein MarCchromosome CDS1543504 630 - 0.630159
NA CV0837 conserved hypothetical proteinchromosome CDS865612 3387 - 0.647476
NA CV0465 conserved hypothetical proteinchromosome CDS483713 1584 + 0.66351
NA CV3813 probable type II secretion system proteinchromosome CDS4110296 1461 - 0.693361
NA CV4082 hypothetical proteinchromosome CDS4418970 1794 + 0.692865
NA CV0479 probable type-4 fimbrial biogenesis proteinchromosome CDS507595 480 + 0.629167
NA CV2871 probable hemagglutininchromosome CDS3127779 11466 - 0.59454
NA CV3875 probable flagellar protein FliSchromosome CDS4177268 438 - 0.586758
NA CV2766 probable transmembrane proteinchromosome CDS3004038 2268 - 0.683862
NA CV2984 probable flagellar protein flgJchromosome CDS3262599 639 - 0.699531
NA CV0413 conserved hypothetical proteinchromosome CDS432059 3000 + 0.701
NA CV3002 probable flagellar motor switch proteinchromosome CDS3277754 351 + 0.669516
NA CV2603 probable type III secretion system ATP synthasechromosome CDS2813261 1335 + 0.64794
NA CV1145 conserved hypothetical proteinchromosome CDS1200525 627 - 0.649123
NA CV0399 probable exbB-like biopolymer transportchromosome CDS415878 678 - 0.69764
NA CV1628 conserved hypothetical proteinchromosome CDS1765439 1530 - 0.728105
NA CV1737 conserved hypothetical proteinchromosome CDS1880520 6096 + 0.531496
NA CV3814 probable type II secretion system proteinchromosome CDS4111753 2127 - 0.650212
NA CV1468 probable activation/secretion signal peptide proteinchromosome CDS1559313 1743 - 0.488239
NA CV0684 hypothetical proteinchromosome CDS709411 585 + 0.62735
NA CV3114 probable type-4 fimbrial biogenesis transmembrane proteinchromosome CDS3400698 498 + 0.660643
NA CV3806 probable general secretion pathway protein Lchromosome CDS4104968 1170 - 0.749573
NA CV2765 probable transmembrane proteinchromosome CDS3000804 1977 - 0.692463
NA CV4365 probable multiple antibiotic resistance protein marCchromosome CDS4708719 648 + 0.66358
NA CV1918 probable hemolysinchromosome CDS2085082 4887 + 0.692245
NA CV3706 conserved hypothetical proteinchromosome CDS4007501 603 + 0.641791
NA CV0480 conserved hypothetical proteinchromosome CDS508071 1065 + 0.646948
NA CV3111 probable type-4 fimbrial pilin related signal peptide proteinchromosome CDS3398889 558 + 0.645161
NA CV3000 probable flagellar hook-basal body complex proteinchromosome CDS3276329 282 - 0.663121
NA CV1346 probable transmembrane proteinchromosome CDS1418368 327 - 0.611621
NA CV0707 hypothetical proteinchromosome CDS731625 1635 - 0.700306
NA CV0685 conserved hypothetical proteinchromosome CDS710060 819 + 0.562882
NA CV0782 hypothetical proteinchromosome CDS807409 636 + 0.72327
NA CV2703 probable outer membrane proteinchromosome CDS2925262 1368 - 0.636696
NA CV1470 conserved hypothetical proteinchromosome CDS1564087 1839 - 0.637847
NA CV0826 hypothetical proteinchromosome CDS853892 342 - 0.614035
NA CV3826 probable type IV prepilin-like proteins leader peptide processing enzymechromosome CDS4123511 918 - 0.66122
clpP CV2558 ATP-dependent Clp protease proteolytic subunitchromosome CDS2753013 633 - 0.619273
ecpD CV1295 chaperone protein ecpD precursorchromosome CDS1362393 750 + 0.626667
escC CV2597 type III secretion system EscC proteinchromosome CDS2804918 1488 - 0.588038
escR CV2607 type III secretion system EscR proteinchromosome CDS2816468 651 + 0.545315
escS CV2608 type III secretion apparatus protein EscSchromosome CDS2817134 270 + 0.6
escT CV2609 type III secretion system EscT proteinchromosome CDS2817405 774 + 0.607235
escU CV2610 type III secretion system EscU proteinchromosome CDS2818175 1056 + 0.558712
escV CV2602 type III secretion system EscV proteinchromosome CDS2811208 2052 + 0.61501
exbB1 CV1972 biopolymer transport proteinchromosome CDS2146374 747 + 0.658635
exbB2 CV1984 biopolymer transport proteinchromosome CDS2162577 747 + 0.658635
exbD1 CV1985 biopolymer transport exbD transmembrane proteinchromosome CDS2163330 444 + 0.648649
exbD2 CV0398 biopolymer transport exbD transmembrane proteinchromosome CDS415481 411 - 0.688564
exbD3 CV1974 biopolymer transport exbD transmembrane proteinchromosome CDS2147581 423 + 0.607565
exbD4 CV1986 biopolymer transport exbD transmembrane proteinchromosome CDS2163784 423 + 0.605201
exbD5 CV1973 biopolymer transport exbD transmembrane proteinchromosome CDS2147127 444 + 0.648649
exdD CV3347 biopolymer transport exbD-related transmembrane proteinchromosome CDS3644157 417 - 0.640288
ffh CV3833 signal recognition particle proteinchromosome CDS4130486 1356 + 0.646018
fhiA CV3007 fhiA proteinchromosome CDS3281425 1713 + 0.678926
fimA CV1294 fimbrial subunit proteinchromosome CDS1361796 525 + 0.617143
fimD CV1296 outer membrane usher protein precursorchromosome CDS1363196 2556 + 0.652973
flgM CV1000 negative regulator of flagellin synthesischromosome CDS1040196 300 + 0.613333
flhA CV1025 flagellar biosynthesis protein flhAchromosome CDS1069240 2085 - 0.648921
flhB1 CV1026 flagellar biosynthetic protein flhBchromosome CDS1071331 1167 - 0.64353
flhB2 CV3006 flagellar biosynthetic protein flhBchromosome CDS3279911 1140 + 0.670175
fliE CV3137 flagellar hook-basal body complex proteinchromosome CDS3422622 324 - 0.564815
fliF1 CV3136 flagellar M-ring proteinchromosome CDS3420829 1740 - 0.67069
fliF2 CV2999 flagellar M-ring proteinchromosome CDS3274642 1629 - 0.705341
fliH CV2997 flagellar assembly proteinchromosome CDS3272932 672 - 0.733631
fliI1 CV3134 flagellum-specific ATP synthasechromosome CDS3417604 1401 - 0.694504
fliI2 CV2996 flagellum-specific ATP synthasechromosome CDS3271615 1314 - 0.717656
fliN CV3129 flagellar motor switch proteinchromosome CDS3414077 444 - 0.65991
fliP CV3003 flagellar biosynthetic protein fliPchromosome CDS3278104 747 + 0.657296
fliQ1 CV3125 flagellar biosynthetic protein FliQchromosome CDS3412080 270 - 0.588889
fliQ2 CV3004 flagellar biosynthetic protein FliQchromosome CDS3278864 273 + 0.652015
fliR1 CV3124 flagellar biosynthetic protein FliRchromosome CDS3411322 759 - 0.640316
fliR2 CV3005 flagellar biosynthetic protein FliRchromosome CDS3279139 780 + 0.684615
fliS2 CV2993 flagellar protein FliSchromosome CDS3269329 393 - 0.661578
ftsY CV4203 cell division protein FtsYchromosome CDS4534974 1128 + 0.667553
gspH CV3810 general secretory pathway protein Hchromosome CDS4108059 477 - 0.704403
gspI CV3809 general secretion pathway protein Ichromosome CDS4107682 381 - 0.690289
gspK CV3807 general secretory pathway protein Kchromosome CDS4106115 990 - 0.658586
hofF CV3812 general secretion pathway protein Fchromosome CDS4109085 1212 - 0.693894
hofG CV3811 general secretion pathway protein Gchromosome CDS4108557 444 - 0.668919
ibeB CV2242 outer membrane drug efflux lipoproteinchromosome CDS2430434 1380 + 0.736232
invA CV2630 invasion proteinchromosome CDS2836202 2061 - 0.664241
invC CV2628 surface presentation of antigens, secretory proteinschromosome CDS2834493 1290 - 0.713953
invG CV2632 invasion protein- outer membranechromosome CDS2839446 1686 - 0.659549
lepB CV2064 signal peptidase Ichromosome CDS2252402 972 + 0.613169
lspA CV3568 lipoprotein signal peptidasechromosome CDS3874481 501 - 0.610778
natC CV3925 periplasmic type I secretion systemchromosome CDS4239765 1335 + 0.672659
oprM CV0433 outer membrane efflux proteinchromosome CDS450477 1401 - 0.713776
pilB CV3828 type 4 fimbrial biogenesis proteinchromosome CDS4125777 1707 - 0.602812
pilC CV3827 fimbrial assembly transmembrane proteinchromosome CDS4124428 1224 - 0.618464
pilE1 CV3116 type IV pilinchromosome CDS3404483 435 + 0.622989
pilE2 CV4209 type IV pilinchromosome CDS4542652 468 - 0.606838
pilE3 CV0483 type IV pilinchromosome CDS513362 408 + 0.664216
pilM CV0833 type 4 fimbrial biogenesis protein PilMchromosome CDS859861 1113 - 0.633423
pilN CV0832 type 4 fimbrial biogenesis protein PilNchromosome CDS859285 576 - 0.612847
pilO CV0831 type 4 fimbrial biogenesis protein PilOchromosome CDS858683 600 - 0.635
pilP CV0830 type 4 fimbrial biogenesis protein PilPchromosome CDS858150 519 - 0.620424
pilQ CV0829 type 4 fimbrial biogenesis protein PilQchromosome CDS856060 2094 - 0.651385
pilT CV0179 twitching motility protein PilTchromosome CDS188088 1038 + 0.636802
pilU1 CV1458 twitching motility proteinchromosome CDS1545762 1131 - 0.625995
pilU2 CV0180 twitching mobility protein transport fimbriachromosome CDS189188 1137 + 0.635004
pilV CV3112 type-4 fimbrial biogenesis PilV transmembrane proteinchromosome CDS3399437 537 + 0.6946
pilZ CV3721 type 4 fimbrial biogenesis proteinchromosome CDS4020108 378 - 0.648148
prgK CV2420 cell invasion protein; lipoprotein, may link inner and outer membraneschromosome CDS2605166 729 - 0.646091
pscQ CV2606 translocation protein in type III secretionchromosome CDS2815513 873 + 0.628866
secA CV4281 preprotein translocase secA subunitchromosome CDS4615330 2712 - 0.655973
secB CV1127 protein-export proteinchromosome CDS1181080 453 + 0.624724
secD CV1345 protein-export membrane protein secDchromosome CDS1416455 1848 - 0.653139
secE CV4199 preprotein translocase transmembrane,secE subunitchromosome CDS4531632 357 - 0.588235
secF CV1344 protein-export membrane protein SecFchromosome CDS1415516 936 - 0.641026
secG CV0940 protein-export integral membrane proteinchromosome CDS975236 357 + 0.543417
secY CV4166 preprotein translocase secY subunitchromosome CDS4504896 1320 - 0.569697
shlB CV1917 hemolysin activator proteinchromosome CDS2083216 1701 + 0.68254
smf CV4267 smf proteinchromosome CDS4601094 1080 + 0.742593
sohB CV1815 serine proteasechromosome CDS1972369 939 - 0.638978
spaO CV2625 surface presentation of antigens; secretory proteinschromosome CDS2832178 891 - 0.716049
spaP CV2624 surface presentation of antigens; secretory proteinschromosome CDS2831526 663 - 0.615385
spaQ CV2623 surface presentation of antigens; secretory proteinschromosome CDS2831168 261 - 0.632184
spaR CV2622 surface presentation of antigens; secretory proteinschromosome CDS2830397 768 - 0.683594
spaS CV2621 secretory protein / flagellar biosynthetic protein flhBchromosome CDS2829334 1062 - 0.637476
ssaJ CV2588 type III secretion system apparatus lipoproteinchromosome CDS2788155 726 + 0.584022
tatA CV0623 Sec-independent protein translocase protein TatAchromosome CDS654866 207 + 0.599034
tatB CV0624 Sec-independent protein translocase protein TatBchromosome CDS655088 525 + 0.721905
tatC CV0625 Sec-independent protein translocase protein TatCchromosome CDS655609 744 + 0.66129
tolB CV0109 TolB protein precursorchromosome CDS121586 1287 + 0.666667
tolQ CV0551 tolQ-related transport transmembrane proteinchromosome CDS588718 669 + 0.657698
tolR CV0107 TolR proteinchromosome CDS120254 414 + 0.673913
yidC CV4404 integral membrane protein, 60 kDachromosome CDS4748648 1638 - 0.642247