Gene list
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COG category: Intracellular trafficking and secretion
Organism: Novosphingobium aromaticivorans DSM 12444, DSM 12444
Number of genes found: 95
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| Novosphingobium aromaticivorans DSM 12444, DSM 12444 | ||||||||
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| Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | Saro_1312 | hypothetical protein | chromosome | CDS | 1356877 | 3231 | + | 0.691736 |
| NA | Saro_1515 | Flp pilus assembly CpaB | chromosome | CDS | 1559822 | 783 | + | 0.621967 |
| NA | Saro_1220 | RND efflux system, outer membrane lipoprotein, NodT | chromosome | CDS | 1271788 | 1404 | + | 0.679487 |
| NA | Saro_2383 | Hemolysin activation/secretion protein-like | chromosome | CDS | 2544608 | 1875 | - | 0.669867 |
| NA | Saro_2652 | type II secretion system protein E | chromosome | CDS | 2887977 | 1518 | - | 0.683136 |
| NA | Saro_2332 | ATPase | chromosome | CDS | 2478089 | 1269 | - | 0.677699 |
| NA | Saro_1516 | type II and III secretion system protein | chromosome | CDS | 1560594 | 1554 | + | 0.605534 |
| NA | Saro_0393 | TolB-like | chromosome | CDS | 429429 | 1356 | + | 0.639381 |
| NA | Saro_1524 | type II secretion system protein | chromosome | CDS | 1568798 | 969 | + | 0.589267 |
| NA | Saro_1990 | preprotein translocase, SecA subunit | chromosome | CDS | 2119388 | 2736 | - | 0.630848 |
| NA | Saro_0362 | conjugal transfer protein precursor | chromosome | CDS | 398177 | 579 | - | 0.683938 |
| NA | Saro_0390 | MotA/TolQ/ExbB proton channel | chromosome | CDS | 427167 | 684 | + | 0.640351 |
| NA | Saro_0309 | conjugation TrbI-like protein | chromosome | CDS | 334136 | 1197 | - | 0.710944 |
| NA | Saro_0015 | biopolymer transport ExbD protein | chromosome | CDS | 11122 | 489 | - | 0.613497 |
| NA | Saro_1801 | DNA processing protein DprA, putative | chromosome | CDS | 1898325 | 1128 | + | 0.684397 |
| NA | Saro_0545 | Outer membrane autotransporter barrel protein | chromosome | CDS | 594815 | 3177 | - | 0.644948 |
| NA | Saro_1522 | type II secretion system protein E | chromosome | CDS | 1566401 | 1404 | + | 0.593305 |
| NA | Saro_0770 | hypothetical protein | chromosome | CDS | 819213 | 534 | - | 0.634831 |
| NA | Saro_0268 | multiple antibiotic resistance (MarC)-related proteins | chromosome | CDS | 286443 | 621 | - | 0.665056 |
| NA | Saro_0316 | conjugal transfer protein TrbD | chromosome | CDS | 341936 | 276 | - | 0.713768 |
| NA | Saro_1076 | type II secretion system protein | chromosome | CDS | 1119798 | 975 | - | 0.634872 |
| NA | Saro_2165 | Type IV secretory pathway protease TraF-like | chromosome | CDS | 2303603 | 525 | + | 0.651429 |
| NA | Saro_1385 | General secretion pathway protein J | chromosome | CDS | 1430170 | 597 | + | 0.695142 |
| NA | Saro_1075 | type II secretion system protein | chromosome | CDS | 1118771 | 1008 | - | 0.643849 |
| NA | Saro_2651 | General secretion pathway protein F | chromosome | CDS | 2886748 | 1230 | - | 0.66748 |
| NA | Saro_1096 | Sec-independent protein translocase TatC | chromosome | CDS | 1137726 | 840 | + | 0.621429 |
| NA | Saro_0359 | conserved hypothetical protein | chromosome | CDS | 395159 | 1740 | - | 0.664943 |
| NA | Saro_0586 | protein-export protein SecB | chromosome | CDS | 631524 | 471 | + | 0.647558 |
| NA | Saro_0765 | hypothetical protein | chromosome | CDS | 816051 | 753 | - | 0.60425 |
| NA | Saro_2650 | General secretion pathway protein G | chromosome | CDS | 2886278 | 468 | - | 0.634615 |
| NA | Saro_1017 | TolB-like | chromosome | CDS | 1056470 | 1386 | + | 0.659452 |
| NA | Saro_1910 | TadE-like | chromosome | CDS | 2023108 | 423 | - | 0.598109 |
| NA | Saro_3060 | signal peptide peptidase SppA, 67K type | chromosome | CDS | 3277719 | 1878 | - | 0.671991 |
| NA | Saro_1521 | Flp pilus assembly protein ATPase CpaE-like | chromosome | CDS | 1565208 | 1197 | + | 0.593985 |
| NA | Saro_1094 | twin-arginine translocation protein, TatA/E family | chromosome | CDS | 1137023 | 252 | + | 0.650794 |
| NA | Saro_1519 | TadE-like | chromosome | CDS | 1564000 | 534 | + | 0.614232 |
| NA | Saro_1079 | type II and III secretion system protein | chromosome | CDS | 1122781 | 1620 | - | 0.659877 |
| NA | Saro_0311 | Conjugal transfer protein | chromosome | CDS | 336357 | 684 | - | 0.663743 |
| NA | Saro_1713 | RND efflux system, outer membrane lipoprotein, NodT | chromosome | CDS | 1800022 | 1467 | - | 0.715746 |
| NA | Saro_0320 | TRAG protein | chromosome | CDS | 344157 | 1986 | - | 0.629909 |
| NA | Saro_0831 | SecE subunit of protein translocation complex | chromosome | CDS | 882900 | 195 | + | 0.620513 |
| NA | Saro_1856 | type II secretion system protein E | chromosome | CDS | 1955826 | 1566 | - | 0.642401 |
| NA | Saro_2148 | outer membrane efflux protein | chromosome | CDS | 2290448 | 1203 | - | 0.692436 |
| NA | Saro_0312 | TrbL/VirB6 plasmid conjugal transfer protein | chromosome | CDS | 337044 | 1311 | - | 0.667429 |
| NA | Saro_1912 | conserved hypothetical protein | chromosome | CDS | 2023985 | 1308 | - | 0.59633 |
| NA | Saro_1095 | twin-arginine translocation protein TatB | chromosome | CDS | 1137301 | 429 | + | 0.685315 |
| NA | Saro_3258 | lipoprotein signal peptidase | chromosome | CDS | 3477635 | 516 | - | 0.635659 |
| NA | Saro_2073 | protein-export membrane protein SecD | chromosome | CDS | 2212771 | 1608 | - | 0.656095 |
| NA | Saro_2497 | TadE-like | chromosome | CDS | 2697274 | 666 | - | 0.624625 |
| NA | Saro_0016 | MotA/TolQ/ExbB proton channel | chromosome | CDS | 11772 | 750 | - | 0.632 |
| NA | Saro_0246 | Type I secretion outer membrane protein, TolC | chromosome | CDS | 254975 | 1617 | + | 0.692022 |
| NA | Saro_1596 | Type IV secretory pathway VirJ component-like | chromosome | CDS | 1658647 | 738 | - | 0.681572 |
| NA | Saro_2999 | hypothetical protein | chromosome | CDS | 3216036 | 894 | - | 0.642058 |
| NA | Saro_2072 | SecF protein | chromosome | CDS | 2211779 | 978 | - | 0.629857 |
| NA | Saro_2162 | ATPase | chromosome | CDS | 2300247 | 2544 | + | 0.644654 |
| NA | Saro_0095 | hypothetical protein | chromosome | CDS | 97182 | 822 | + | 0.647202 |
| NA | Saro_1905 | Flp/Fap pilin component | chromosome | CDS | 2018861 | 180 | - | 0.6 |
| NA | Saro_2201 | SMF protein | chromosome | CDS | 2341420 | 1038 | + | 0.657033 |
| NA | Saro_1404 | signal recognition particle protein | chromosome | CDS | 1447540 | 1476 | + | 0.660569 |
| NA | Saro_1329 | hypothetical protein | chromosome | CDS | 1371876 | 705 | + | 0.64539 |
| NA | Saro_3055 | ATP-dependent Clp protease, proteolytic subunit ClpP | chromosome | CDS | 3271222 | 708 | - | 0.648305 |
| NA | Saro_0391 | Biopolymer transport protein ExbD/TolR | chromosome | CDS | 427850 | 480 | + | 0.666667 |
| NA | Saro_0310 | Conjugal transfer protein TrbG/VirB9/CagX | chromosome | CDS | 335329 | 1032 | - | 0.687984 |
| NA | Saro_2199 | SMF protein | chromosome | CDS | 2339884 | 888 | + | 0.647523 |
| NA | Saro_1526 | peptidase A24A, prepilin type IV | chromosome | CDS | 1570451 | 474 | + | 0.582278 |
| NA | Saro_1123 | hypothetical protein | chromosome | CDS | 1167283 | 738 | + | 0.688347 |
| NA | Saro_0314 | putative conjugal transfer protein TrbJ | chromosome | CDS | 338682 | 777 | - | 0.674389 |
| NA | Saro_1523 | type II secretion system protein | chromosome | CDS | 1567809 | 987 | + | 0.593718 |
| NA | Saro_2730 | hypothetical protein | chromosome | CDS | 2958141 | 231 | + | 0.61039 |
| NA | Saro_0186 | Type I secretion outer membrane protein, TolC | chromosome | CDS | 189604 | 1458 | - | 0.680384 |
| NA | Saro_1906 | hypothetical protein | chromosome | CDS | 2019139 | 189 | - | 0.507937 |
| NA | Saro_1989 | Hemolysin activation/secretion protein-like | chromosome | CDS | 2117429 | 1764 | - | 0.658163 |
| NA | Saro_2305 | peptidase A24A-like | chromosome | CDS | 2445429 | 789 | - | 0.669201 |
| NA | Saro_1400 | signal recognition particle-docking protein FtsY | chromosome | CDS | 1442564 | 927 | - | 0.670982 |
| NA | Saro_1081 | peptidase A24A, prepilin type IV | chromosome | CDS | 1125506 | 501 | - | 0.646707 |
| NA | Saro_1384 | General secretion pathway protein I | chromosome | CDS | 1429739 | 435 | + | 0.708046 |
| NA | Saro_1080 | Flp pilus assembly CpaB | chromosome | CDS | 1124402 | 1029 | - | 0.669582 |
| NA | Saro_2439 | conserved hypothetical protein | chromosome | CDS | 2624046 | 1590 | - | 0.646541 |
| NA | Saro_2653 | type II and III secretion system protein | chromosome | CDS | 2889499 | 2247 | - | 0.660881 |
| NA | Saro_1269 | SecY protein | chromosome | CDS | 1308286 | 1368 | + | 0.61769 |
| NA | Saro_0829 | conserved hypothetical protein | chromosome | CDS | 881069 | 786 | - | 0.66285 |
| NA | Saro_0578 | 60 kDa inner membrane insertion protein | chromosome | CDS | 624133 | 1803 | + | 0.63949 |
| NA | Saro_0315 | CagE, TrbE, VirB component of type IV transporter system | chromosome | CDS | 339464 | 2466 | - | 0.669911 |
| NA | Saro_0909 | Peptidase S26A, signal peptidase I | chromosome | CDS | 963464 | 906 | - | 0.673289 |
| NA | Saro_0317 | Conjugal transfer protein TrbC | chromosome | CDS | 342211 | 333 | - | 0.660661 |
| NA | Saro_2074 | preprotein translocase, YajC subunit | chromosome | CDS | 2214406 | 330 | - | 0.645455 |
| NA | Saro_1386 | General secretion pathway protein K | chromosome | CDS | 1430763 | 987 | + | 0.675785 |
| NA | Saro_1014 | MotA/TolQ/ExbB proton channel | chromosome | CDS | 1054424 | 702 | + | 0.660969 |
| NA | Saro_2382 | hypothetical protein | chromosome | CDS | 2535399 | 9210 | - | 0.661672 |
| NA | Saro_1988 | hypothetical protein | chromosome | CDS | 2109582 | 7848 | - | 0.669215 |
| NA | Saro_0014 | Biopolymer transport protein ExbD/TolR | chromosome | CDS | 10639 | 441 | - | 0.578231 |
| NA | Saro_0764 | conserved hypothetical protein | chromosome | CDS | 813526 | 2523 | - | 0.603646 |
| NA | Saro_1015 | Biopolymer transport protein ExbD/TolR | chromosome | CDS | 1055129 | 453 | + | 0.684327 |
| NA | Saro_1808 | Peptidase S26A, signal peptidase I | chromosome | CDS | 1906678 | 864 | - | 0.634259 |
| NA | Saro_0318 | type II secretion system protein E | chromosome | CDS | 342540 | 984 | - | 0.700203 |
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