Gene list
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COG category: Intracellular trafficking and secretion
Organism: Geobacter metallireducens GS-15, GS-15
Number of genes found: 107
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Geobacter metallireducens GS-15, GS-15 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | Gmet_3097 | Flagellar transport protein FliP | SubName: Full=Flagellar biogenesis protein FliP; | chromosome | CDS | 3497167 | 753 | - | 0.614874 |
NA | Gmet_0646 | SecY protein | RecName: Full=Protein translocase subunit SecY; | chromosome | CDS | 708986 | 1308 | + | 0.480887 |
NA | Gmet_1458 | Filamentous haemagglutinin-like | SubName: Full=Filamentous hemagglutinin-like outer membrane protein; | chromosome | CDS | 1628543 | 9900 | + | 0.630606 |
NA | Gmet_2173 | Parallel beta-helix repeat protein | SubName: Full=Single-stranded right-handed parallel beta-helix fold protein, galacturonase family; | chromosome | CDS | 2454744 | 2181 | - | 0.566254 |
NA | Gmet_1549 | Outer membrane efflux protein | SubName: Full=Metal ion efflux pump, RND family, outer membrane protein; | chromosome | CDS | 1756046 | 1281 | - | 0.59719 |
NA | Gmet_3096 | Flagellar biosynthesis protein FliQ | SubName: Full=Flagellar biogenesis protein FliQ; | chromosome | CDS | 3496819 | 270 | - | 0.581481 |
NA | Gmet_2132 | Twin-arginine translocation protein TatA/E | RecName: Full=Sec-independent protein translocase protein TatA; | chromosome | CDS | 2399929 | 201 | + | 0.517413 |
NA | Gmet_1857 | N-terminal methylation | SubName: Full=Type II secretion system pseudopilin OxpG; | chromosome | CDS | 2070218 | 423 | - | 0.51773 |
NA | Gmet_0959 | Peptidase A24A-like | RecName: Full=Type 4 prepilin-like proteins leader peptide-processing enzyme; EC=2.1.1.-; EC=3.4.23.43; | chromosome | CDS | 1068551 | 780 | + | 0.626923 |
NA | Gmet_0737 | type IV pilus assembly protein PilY1 | SubName: Full=Type IV pilus assembly protein PilY1; | chromosome | CDS | 809210 | 2976 | + | 0.565188 |
NA | Gmet_0111 | General secretory system II, protein E-like | SubName: Full=GspIIEN domain protein; | chromosome | CDS | 137916 | 1113 | - | 0.638814 |
NA | Gmet_3095 | Flagellar biosynthesis protein FliR | RecName: Full=Flagellar biosynthetic protein fliR; | chromosome | CDS | 3495941 | 795 | - | 0.591195 |
NA | Gmet_0811 | RND efflux system, outer membrane lipoprotein, NodT | SubName: Full=Efflux pump, RND family, outer membrane lipoprotein; | chromosome | CDS | 892515 | 1554 | + | 0.629344 |
NA | Gmet_3365 | type II secretion system protein E | SubName: Full=Type II secretion system ATPase GspE; | chromosome | CDS | 3781897 | 1563 | + | 0.662828 |
NA | Gmet_0581 | High-molecular-weight cytochrome c | chromosome | CDS | 636065 | 8739 | + | 0.62078 | |
NA | Gmet_0965 | N-terminal methylation | SubName: Full=Type IV pilus minor pilin PilW; | chromosome | CDS | 1074085 | 684 | + | 0.573099 |
NA | Gmet_0559 | Parallel beta-helix repeat protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 601354 | 2499 | + | 0.640656 |
NA | Gmet_0972 | Fimbrial assembly | SubName: Full=Type IV pilus biogenesis protein PilN; | chromosome | CDS | 1081077 | 573 | + | 0.575916 |
NA | Gmet_1452 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1622864 | 738 | - | 0.556911 |
NA | Gmet_1865 | type II secretion system protein | SubName: Full=Type II secretion system inner membrane protein PulF; | chromosome | CDS | 2078196 | 1209 | - | 0.517783 |
NA | Gmet_3367 | General secretion pathway protein G | SubName: Full=Type II secretion system major pseudopilin GspG; | chromosome | CDS | 3784674 | 444 | + | 0.619369 |
NA | Gmet_1863 | putative type IV pilus assembly protein PilM | SubName: Full=Type II secretion system ATPase PulM, putative; | chromosome | CDS | 2075460 | 930 | - | 0.531183 |
NA | Gmet_0974 | putative type IV pilus assembly protein PilP | SubName: Full=Type IV pilus assembly lipoprotein PilP; | chromosome | CDS | 1082250 | 549 | + | 0.584699 |
NA | Gmet_3363 | PDZ/DHR/GLGF | SubName: Full=Type II secretion system protein GspC, putative serine protease; | chromosome | CDS | 3779067 | 873 | + | 0.600229 |
NA | Gmet_2466 | Peptidoglycan-binding domain 1 | SubName: Full=Peptidoglycan-binding ATPase, putative; | chromosome | CDS | 2792209 | 1689 | + | 0.659562 |
NA | Gmet_3113 | Flagellar hook-basal body complex protein FliE | RecName: Full=Flagellar hook-basal body complex protein FliE; | chromosome | CDS | 3512284 | 306 | - | 0.604575 |
NA | Gmet_3364 | type II and III secretion system protein:NolW-like | SubName: Full=Type II secretion system protein GspD, putative; | chromosome | CDS | 3779990 | 1911 | + | 0.608059 |
NA | Gmet_0909 | cytochrome c family protein | SubName: Full=Cytochrome c; | chromosome | CDS | 1001971 | 780 | + | 0.60641 |
NA | Gmet_0613 | SecE subunit of protein translocation complex | RecName: Full=Protein translocase subunit SecE; | chromosome | CDS | 684038 | 186 | + | 0.516129 |
NA | Gmet_3109 | ATPase FliI/YscN | SubName: Full=Flagellum-specific ATPase FliI; | chromosome | CDS | 3507269 | 1332 | - | 0.638138 |
NA | Gmet_1606 | conserved hypothetical protein | SubName: Full=Protein phosphoaspartate phosphatase CheX; | chromosome | CDS | 1806314 | 864 | - | 0.540509 |
NA | Gmet_0276 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 308902 | 645 | + | 0.51938 |
NA | Gmet_2469 | Fibronectin, type III | SubName: Full=Fibronectin type III repeat, DUF2341 repeat and LamG-like domain protein; | chromosome | CDS | 2795421 | 10524 | - | 0.625903 |
NA | Gmet_0933 | conserved hypothetical protein | SubName: Full=Dystroglycan-type cadherin-like domain repeat protein; | chromosome | CDS | 1029621 | 7911 | + | 0.611806 |
NA | Gmet_1460 | Biopolymer transport protein ExbD/TolR | SubName: Full=Biopolymer transport membrane protein, TolR-related protein; | chromosome | CDS | 1640250 | 408 | + | 0.605392 |
NA | Gmet_1395 | type II secretion system protein | SubName: Full=Type IV pilus inner membrane protein PilC; | chromosome | CDS | 1562595 | 1218 | + | 0.602627 |
NA | Gmet_3129 | Outer membrane efflux protein | SubName: Full=Efflux pump, RND family, outer membrane protein; | chromosome | CDS | 3525824 | 1341 | - | 0.656972 |
NA | Gmet_3538 | Biopolymer transport protein ExbD/TolR | SubName: Full=Biopolymer transport membrane protein, TolR-related protein; | chromosome | CDS | 3971978 | 420 | + | 0.611905 |
NA | Gmet_0853 | YajC | SubName: Full=Preprotein translocase, YajC subunit; | chromosome | CDS | 939968 | 321 | + | 0.582555 |
NA | Gmet_1459 | MotA/TolQ/ExbB proton channel | SubName: Full=Biopolymer transport membrane proton channel, TolQ-related protein; | chromosome | CDS | 1638442 | 1812 | + | 0.638521 |
NA | Gmet_1299 | lipoprotein, putative | SubName: Full=Lipoprotein, putative; | chromosome | CDS | 1461582 | 1338 | + | 0.622571 |
NA | Gmet_3473 | response regulator receiver domain protein (CheY-like) | SubName: Full=Response receiver type II secretion system ATPase and double zinc ribbon protein, PulE and DZR domain-containing; | chromosome | CDS | 3894066 | 2472 | - | 0.618123 |
NA | Gmet_3099 | Flagellar motor switch FliN | SubName: Full=Flagellar motor switch protein FliN; | chromosome | CDS | 3498427 | 306 | - | 0.601307 |
NA | Gmet_1063 | Twin-arginine translocation protein TatA/E | RecName: Full=Sec-independent protein translocase protein TatA; | chromosome | CDS | 1183845 | 183 | + | 0.562842 |
NA | Gmet_3110 | flagellar assembly protein fliH, putative | SubName: Full=Flagellar assembly protein FliH; | chromosome | CDS | 3508587 | 915 | - | 0.672131 |
NA | Gmet_2872 | Signal recognition particle protein | RecName: Full=Signal recognition particle protein; AltName: Full=Fifty-four homolog; | chromosome | CDS | 3252941 | 1359 | - | 0.601177 |
NA | Gmet_0576 | hypothetical protein | SubName: Full=Cytochrome c; | chromosome | CDS | 626056 | 3855 | + | 0.618158 |
NA | Gmet_3465 | Outer membrane efflux protein | RecName: Full=Protein CyaE; | chromosome | CDS | 3880184 | 1326 | - | 0.634238 |
NA | Gmet_2517 | Outer membrane efflux protein | SubName: Full=Efflux pump, RND family, outer membrane protein; | chromosome | CDS | 2856706 | 1368 | - | 0.619883 |
NA | Gmet_0556 | NHL repeat protein | SubName: Full=NHL repeat domain protein; | chromosome | CDS | 594359 | 2700 | + | 0.622222 |
NA | Gmet_0914 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1009070 | 456 | + | 0.600877 |
NA | Gmet_0963 | N-terminal methylation | SubName: Full=Type IV pilus minor pilin FimU; | chromosome | CDS | 1073161 | 513 | + | 0.549708 |
NA | Gmet_0971 | Type IV pilus assembly protein PilM | SubName: Full=Type IV pilus biogenesis ATPase PilM; | chromosome | CDS | 1080028 | 1056 | + | 0.577652 |
NA | Gmet_0445 | Flagellar protein FliS | SubName: Full=Flagellin export facilitator protein FliS; | chromosome | CDS | 489861 | 423 | + | 0.456265 |
NA | Gmet_3400 | Pilus retraction protein PilT | SubName: Full=Twitching motility pilus retraction ATPase; | chromosome | CDS | 3814163 | 1071 | - | 0.646125 |
NA | Gmet_0352 | Peptidase A8, signal peptidase II | RecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; Short=SPase II; | chromosome | CDS | 393644 | 489 | + | 0.611452 |
NA | Gmet_A3572 | probable conjugal transfer TrbJ signal peptide protein | SubName: Full=Conjugal transfer entry/exclusion protein TrbJ; | unnamed | CDS | 6237 | 720 | - | 0.572222 |
NA | Gmet_0975 | type II and III secretion system protein:NolW-like:Secretin/TonB, short-like | SubName: Full=Type IV pilus secretin lipoprotein PilQ; | chromosome | CDS | 1082821 | 2613 | + | 0.572905 |
NA | Gmet_3094 | Flagellar biosynthetic protein FlhB | SubName: Full=Flagellar biogenesis protein FlhB; | chromosome | CDS | 3494880 | 1062 | - | 0.595104 |
NA | Gmet_3537 | MotA/TolQ/ExbB proton channel | SubName: Full=Biopolymer transport membrane proton channel, TolQ-related protein; | chromosome | CDS | 3971294 | 675 | + | 0.598518 |
NA | Gmet_1393 | type II secretion system protein E | SubName: Full=Type IV pilus biogenesis ATPase PilB; | chromosome | CDS | 1559620 | 1707 | + | 0.601054 |
NA | Gmet_1387 | Sec-independent periplasmic protein translocase | RecName: Full=Sec-independent protein translocase protein TatC; | chromosome | CDS | 1553226 | 861 | + | 0.595819 |
NA | Gmet_0854 | SecD export membrane protein | RecName: Full=Protein translocase subunit SecD; | chromosome | CDS | 940320 | 1602 | + | 0.611735 |
NA | Gmet_1190 | Outer membrane efflux protein | SubName: Full=Efflux pump, RND family, outer membrane protein; | chromosome | CDS | 1321924 | 1533 | - | 0.560992 |
NA | Gmet_0426 | Flagellar biosynthesis protein FlhA | SubName: Full=Flagellar biogenesis protein FlhA; | chromosome | CDS | 472019 | 2085 | + | 0.640767 |
NA | Gmet_1650 | Outer membrane efflux protein | SubName: Full=Efflux pump, RND family, outer membrane protein; | chromosome | CDS | 1852920 | 1500 | + | 0.566667 |
NA | Gmet_0260 | Pilus retraction protein PilT | SubName: Full=Twitching motility pilus retraction ATPase; | chromosome | CDS | 291318 | 1071 | - | 0.630252 |
NA | Gmet_0973 | Pilus assembly protein, PilO | SubName: Full=Type IV pilus biogenesis protein PilO; | chromosome | CDS | 1081670 | 597 | + | 0.541039 |
NA | Gmet_1750 | Peptidase S49, SppA | SubName: Full=Peptidase, S49 family; | chromosome | CDS | 1965564 | 906 | + | 0.578366 |
NA | Gmet_0436 | anti-sigma-28 factor, FlgM | SubName: Full=Negative regulator of flagellin synthesis FlgM; | chromosome | CDS | 481923 | 294 | + | 0.639456 |
NA | Gmet_3561 | 60 kDa inner membrane insertion protein | RecName: Full=Membrane protein insertase YidC; AltName: Full=Foldase YidC; AltName: Full=Membrane integrase YidC; AltName: Full=Membrane protein YidC; | chromosome | CDS | 3995018 | 1611 | - | 0.589696 |
NA | Gmet_3217 | Twin-arginine translocation protein TatA/E | RecName: Full=Sec-independent protein translocase protein TatA; | chromosome | CDS | 3617404 | 186 | - | 0.548387 |
NA | Gmet_2026 | ATPase | SubName: Full=ATPase, putative; | chromosome | CDS | 2266711 | 1158 | - | 0.567358 |
NA | Gmet_3149 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3545209 | 366 | - | 0.612022 |
NA | Gmet_0890 | SMF protein | SubName: Full=DNA protection single-strand-binding protein DprA; | chromosome | CDS | 980811 | 1077 | + | 0.671309 |
NA | Gmet_3540 | WD40-like Beta Propeller | RecName: Full=Protein TolB; Flags: Precursor; | chromosome | CDS | 3973146 | 1290 | + | 0.653488 |
NA | Gmet_1859 | type II and III secretion system protein | SubName: Full=Type II secretion system secretin lipoprotein PulQ; | chromosome | CDS | 2071154 | 2586 | - | 0.534416 |
NA | Gmet_1376 | Outer membrane efflux protein | RecName: Full=Protein CyaE; | chromosome | CDS | 1537900 | 1308 | - | 0.629205 |
NA | Gmet_1402 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1569993 | 870 | + | 0.487356 |
NA | Gmet_3371 | General secretion pathway protein K | RecName: Full=Type II secretion system protein K; | chromosome | CDS | 3786603 | 900 | + | 0.645556 |
NA | Gmet_0861 | type II secretion system protein E | SubName: Full=PilB/PulE/GspE family ATPase; | chromosome | CDS | 949510 | 1929 | + | 0.595127 |
NA | Gmet_0951 | SecA protein | RecName: Full=Protein translocase subunit SecA; | chromosome | CDS | 1055207 | 2700 | + | 0.611481 |
NA | Gmet_3369 | N-terminal methylation | SubName: Full=Type II secretion system minor pseudopilin GspI; | chromosome | CDS | 3785622 | 372 | + | 0.634409 |
NA | Gmet_1949 | Preprotein translocase SecG subunit | SubName: Full=Preprotein translocase, SecG subunit; | chromosome | CDS | 2177454 | 396 | + | 0.55303 |
NA | Gmet_0967 | type IV pilin biogenesis protein, putative | SubName: Full=Type IV pilus assembly protein PilY1; | chromosome | CDS | 1075357 | 3093 | + | 0.570643 |
NA | Gmet_1858 | N-terminal methylation | SubName: Full=Type II secretion system pseudopilin PulG; | chromosome | CDS | 2070642 | 486 | - | 0.528807 |
NA | Gmet_0785 | Outer membrane efflux protein | SubName: Full=Efflux pump, RND family, outer membrane protein; | chromosome | CDS | 866372 | 1362 | - | 0.646843 |
NA | Gmet_1176 | Cell division transporter substrate-binding protein FtsY | RecName: Full=Signal recognition particle receptor FtsY; Short=SRP receptor; | chromosome | CDS | 1303683 | 1056 | + | 0.600379 |
NA | Gmet_3507 | Outer membrane efflux protein | SubName: Full=Efflux pump, RND family, outer membrane protein; | chromosome | CDS | 3936875 | 1308 | + | 0.661315 |
NA | Gmet_3543 | Twin-arginine translocation protein TatB | RecName: Full=Sec-independent protein translocase protein TatA; | chromosome | CDS | 3976082 | 312 | - | 0.637821 |
NA | Gmet_3112 | Flagellar FliF M-ring protein | RecName: Full=Flagellar M-ring protein; | chromosome | CDS | 3510531 | 1584 | - | 0.640152 |
NA | Gmet_0962 | N-terminal methylation | SubName: Full=Type IV pilus minor pilin PilE; | chromosome | CDS | 1072394 | 570 | + | 0.570175 |
NA | Gmet_0580 | High-molecular-weight cytochrome c | SubName: Full=Cytochrome c; | chromosome | CDS | 633445 | 2610 | + | 0.620306 |
NA | Gmet_1767 | Peptidase S26A, signal peptidase I | SubName: Full=Signal peptidase I; | chromosome | CDS | 1982405 | 681 | + | 0.525698 |
NA | Gmet_1394 | Pilus retraction protein PilT | SubName: Full=Twitching motility pilus retraction ATPase; | chromosome | CDS | 1561466 | 1098 | + | 0.617486 |
NA | Gmet_A3573 | Type IV secretory pathway TrbL components-like | SubName: Full=Conjugal transfer protein TrbL; | unnamed | CDS | 7043 | 1452 | - | 0.597107 |
NA | Gmet_1873 | Peptidase S14, ClpP | RecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; | chromosome | CDS | 2088115 | 600 | - | 0.516667 |
NA | Gmet_2286 | anti-sigma-28 factor, FlgM | SubName: Full=FlgM family protein; | chromosome | CDS | 2591460 | 306 | - | 0.604575 |
NA | Gmet_2310 | ATPase | SubName: Full=ATPase, putative; | chromosome | CDS | 2617894 | 804 | - | 0.634328 |
NA | Gmet_1666 | RND efflux system, outer membrane lipoprotein, NodT | SubName: Full=Efflux pump, RND family, outer membrane lipoprotein; | chromosome | CDS | 1870554 | 1641 | - | 0.607556 |
NA | Gmet_1457 | surface antigen (D15) | SubName: Full=Outer membrane protein; | chromosome | CDS | 1626860 | 1668 | + | 0.613309 |
NA | Gmet_3366 | General secretion pathway protein F | SubName: Full=Type II secretion system inner membrane protein GspF; | chromosome | CDS | 3783440 | 1212 | + | 0.662541 |
NA | Gmet_0855 | SecF protein | RecName: Full=Protein-export membrane protein SecF; | chromosome | CDS | 941931 | 909 | + | 0.569857 |
NA | Gmet_3401 | General secretory system II, protein E-like | SubName: Full=PilB/PulE/GspE family ATPase; | chromosome | CDS | 3815246 | 1623 | - | 0.693161 |
NA | Gmet_1864 | type II secretion system protein E | SubName: Full=Type II secretion system ATPase PulE; | chromosome | CDS | 2076422 | 1722 | - | 0.550523 |
NA | Gmet_0199 | Pilus retraction protein PilT | SubName: Full=Twitching motility pilus retraction ATPase; | chromosome | CDS | 230732 | 1164 | + | 0.618557 |
NA | Gmet_2438 | conserved hypothetical protein | SubName: Full=Outer membrane channel, putative; | chromosome | CDS | 2761676 | 1605 | - | 0.611838 |