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2024-05-16 22:50:04

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Pelobacter carbinolicus DSM 2380, DSM 2380

Number of genes found: 120

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Pelobacter carbinolicus DSM 2380, DSM 2380
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA Pcar_0396 hypothetical proteinSubName: Full=Type IV pilus biogenesis protein MshQ, putative; chromosome CDS484521 3921 + 0.597297
NA Pcar_1891 putative preprotein translocase subunit SecFRecName: Full=Protein-export membrane protein SecF; chromosome CDS2205857 924 - 0.528139
NA Pcar_1164 related to flagellar biosynthetic protein (FliR)RecName: Full=Flagellar biosynthetic protein fliR; chromosome CDS1361367 777 - 0.57529
NA Pcar_1162 probable flagellar biosynthesis protein (FlhA)SubName: Full=Flagellar biogenesis protein FlhA; chromosome CDS1358140 2085 - 0.580336
NA Pcar_0847 Biopolymer transport proteins-likeSubName: Full=Biopolymer transport membrane proton channel, TolQ-related protein; chromosome CDS1000733 636 - 0.619497
NA Pcar_1746 putative pilus assembly-related, exported proteinSubName: Full=Flp pilus assembly protein RcpC; chromosome CDS2043709 819 + 0.525031
NA Pcar_1679 type II secretion system protein, putativeSubName: Full=Type II secretion system secretin lipoprotein PulQ; chromosome CDS1959401 2304 - 0.536458
NA Pcar_3027 Multiple antibiotic transporter-likeSubName: Full=Membrane protein, MarC family; chromosome CDS3538721 627 - 0.562998
NA Pcar_0136 type II secretion system protein, putativeSubName: Full=Type II secretion system secretin lipoprotein PulQ; chromosome CDS168727 2340 + 0.493162
NA Pcar_1716 metal ion efflux outer membrane protein family protein, putative chromosome CDS2007067 1362 - 0.520558
NA Pcar_0381 Tfp pilus assembly protein ATPase PilM-likeSubName: Full=Type IV pilus biogenesis ATPase MshI1; chromosome CDS471180 957 + 0.592476
NA Pcar_2154 fimbrial protein pilinSubName: Full=Type IV pilus minor pilin PilE; chromosome CDS2509412 417 - 0.489209
NA Pcar_0142 outer membrane protein, putative chromosome CDS175839 1809 + 0.609729
NA Pcar_2874 probable outer membrane channel lipoprotein chromosome CDS3359511 1515 - 0.551815
NA Pcar_1681 hypothetical proteinSubName: Full=Type II secretion system protein PulO, putative; chromosome CDS1962338 555 - 0.50991
NA Pcar_0364 Outer membrane protein-like chromosome CDS452227 1503 + 0.578177
NA Pcar_0161 membrane protein, MarC familySubName: Full=Membrane protein, MarC family; chromosome CDS202655 633 + 0.628752
NA Pcar_1617 signal peptidase ISubName: Full=Signal peptidase I; chromosome CDS1890455 660 - 0.510606
NA Pcar_2148 twitching motility protein PilTSubName: Full=Twitching motility pilus retraction ATPase; chromosome CDS2500710 1125 - 0.541333
NA Pcar_2135 putative type IV pilus assembly protein PilPSubName: Full=Type IV pilus assembly lipoprotein PilP; chromosome CDS2487836 534 - 0.477528
NA Pcar_0093 Sec-independent protein secretion pathway components-likeRecName: Full=Sec-independent protein translocase protein TatA; chromosome CDS111964 270 + 0.603704
NA Pcar_2157 type IV pilus assembly protein PilWSubName: Full=Type IV pilus minor pilin PilW; chromosome CDS2515330 1041 - 0.51489
NA Pcar_0870 Type II secretory pathway component PulD-likeSubName: Full=Type IV pilus secretin PihL; chromosome CDS1024695 1821 + 0.590335
NA Pcar_1892 protein-export membrane protein SecDRecName: Full=Protein translocase subunit SecD; chromosome CDS2206791 1602 - 0.566167
NA Pcar_0094 Sec-independent protein translocase TatCRecName: Full=Sec-independent protein translocase protein TatC; chromosome CDS112226 753 + 0.577689
NA Pcar_0667 outer membrane proteinSubName: Full=Efflux pump, outer membrane protein, NodT family; chromosome CDS807391 1437 + 0.607516
NA Pcar_0126 conserved hypothetical proteinSubName: Full=Endonuclease, TnsA family; chromosome CDS155770 663 - 0.542986
NA Pcar_0386 MSHA biogenesis protein MshMSubName: Full=Type IV pilus retraction ATPase MshM; chromosome CDS475536 846 + 0.58156
NA Pcar_1166 flagellar biosynthetic protein FliPSubName: Full=Flagellar biogenesis protein FliP; chromosome CDS1362441 747 - 0.563588
NA Pcar_2147 type IV pilus biogenesis protein PilCSubName: Full=Type IV pilus inner membrane protein PilC; chromosome CDS2499367 1218 - 0.470443
NA Pcar_2137 type IV pilus biogenesis protein PilNSubName: Full=Type IV pilus biogenesis protein PilN; chromosome CDS2488977 579 - 0.438687
NA Pcar_1101 outer membrane protein OprN precursorSubName: Full=Efflux pump, RND family, outer membrane protein; chromosome CDS1296119 1413 + 0.599434
NA Pcar_0408 DNA processing protein DprASubName: Full=DNA protection single-strand-binding protein DprA; chromosome CDS499874 1101 - 0.613079
NA Pcar_0130 type IV pilus biogenesis protein PilC, putativeSubName: Full=Type II secretion system inner membrane protein PulF; chromosome CDS163051 1206 + 0.541459
NA Pcar_2975 tolB protein chromosome CDS3485148 1332 - 0.603604
NA Pcar_0814 multidrug efflux system outer membrane subunitSubName: Full=Efflux pump, RND family, outer membrane lipoprotein; chromosome CDS960585 1440 + 0.634028
NA Pcar_2139 type 4 prepilin-like proteins leader peptide processing enzymeRecName: Full=Type 4 prepilin-like proteins leader peptide-processing enzyme; EC=2.1.1.-; EC=3.4.23.43; chromosome CDS2491293 780 - 0.458974
NA Pcar_2156 type IV pilus assembly protein PilXSubName: Full=Type IV pilus minor pilin PilX; chromosome CDS2514769 537 - 0.538175
NA Pcar_1683 hypothetical proteinSubName: Full=Type II secretion system ATPase PulM, putative; chromosome CDS1963437 888 - 0.531532
NA Pcar_3143 membrane protein, putativeRecName: Full=Membrane protein insertase YidC; AltName: Full=Foldase YidC; AltName: Full=Membrane integrase YidC; AltName: Full=Membrane protein YidC; chromosome CDS3663225 1629 - 0.476366
NA Pcar_0863 hypothetical proteinSubName: Full=Type IV pilus minor pilin PihD; chromosome CDS1016592 1188 + 0.587542
NA Pcar_0505 twitching motility protein PilTSubName: Full=Twitching motility pilus retraction ATPase; chromosome CDS615098 1044 - 0.552682
NA Pcar_1015 Outer membrane protein-likeSubName: Full=Efflux pump, RND family, outer membrane protein; chromosome CDS1189947 1467 - 0.523517
NA Pcar_2136 type IV pilus biogenesis protein PilOSubName: Full=Type IV pilus biogenesis protein PilO; chromosome CDS2488369 612 - 0.428105
NA Pcar_2978 TolQ proteinSubName: Full=Biopolymer transport membrane proton channel, TolQ-related protein; chromosome CDS3487793 672 - 0.563988
NA Pcar_1868 PilB-like proteinSubName: Full=Type II secretion system protein, putative; chromosome CDS2182027 600 - 0.526667
NA Pcar_0458 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS558223 801 - 0.56804
NA Pcar_0388 type II secretory pathway, ATPaseSubName: Full=Type IV pilus biogenesis ATPase MshE; chromosome CDS477834 1785 + 0.605602
NA Pcar_2391 MotA/TolQ/ExbB proton channel family proteinSubName: Full=Biopolymer transport membrane proton channel, TolQ-related protein; chromosome CDS2815662 705 - 0.592908
NA Pcar_2126 outer membrane efflux proteinSubName: Full=Efflux pump, RND family, outer membrane protein; chromosome CDS2476605 1527 - 0.561886
NA Pcar_1303 general secretion pathway protein-related proteinSubName: Full=ATPase, putative; chromosome CDS1526024 912 + 0.536184
NA Pcar_2134 type IV pilus biogenesis protein PilQSubName: Full=Type IV pilus secretin PilQ; chromosome CDS2485210 2625 - 0.471238
NA Pcar_1165 probable flagellar biosynthetic protein (FliQ)SubName: Full=Flagellar biogenesis protein FliQ; chromosome CDS1362143 270 - 0.574074
NA Pcar_0871 ATPases involved in pili biogenesis, PilT likeSubName: Full=Type IV pilus retraction ATPase PihM; chromosome CDS1026597 1137 + 0.620053
NA Pcar_1881 signal peptide peptidase SppA, 36K typeSubName: Full=Peptidase, S49 family; chromosome CDS2194247 897 - 0.502787
NA Pcar_3003 Outer membrane protein-likeSubName: Full=Periplasmic substrate-binding protein and efflux pump, RND family, outer membrane protein; chromosome CDS3512810 2451 - 0.610363
NA Pcar_2158 Tfp pilus assembly protein PilV-likeSubName: Full=Type IV pilus minor pilin PilV; chromosome CDS2516388 468 - 0.512821
NA Pcar_2149 type IV pilus biogenesis protein PilBSubName: Full=Type IV pilus biogenesis ATPase PilB; chromosome CDS2501930 1701 - 0.536743
NA Pcar_1189 probable flagellum-specific ATP synthase (FliI)SubName: Full=Flagellum-specific ATPase FliI; chromosome CDS1395741 1302 - 0.624424
NA Pcar_2738 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3197754 1299 - 0.602002
NA Pcar_0289 outer membrane efflux proteinSubName: Full=Efflux pump, RND family, outer membrane lipoprotein; chromosome CDS360647 1425 + 0.564912
NA Pcar_0138 hypothetical proteinSubName: Full=Type II secretion system pseudopilin OxpG; chromosome CDS171496 450 + 0.542222
NA Pcar_2406 twitching motility protein PilTSubName: Full=Twitching motility pilus retraction ATPase; chromosome CDS2831134 1167 + 0.567267
NA Pcar_2977 TolR proteinSubName: Full=Biopolymer transport membrane protein, TolR-related protein; chromosome CDS3487357 435 - 0.595402
NA Pcar_0385 putative MSHA biogenesis protein MshL chromosome CDS473890 1614 + 0.586741
NA Pcar_1685 type IV pilus biogenesis protein PilC, putativeSubName: Full=Type II secretion system inner membrane protein PulF; chromosome CDS1966073 1209 - 0.502895
NA Pcar_1192 related to flagellar M-ring protein (FliF)RecName: Full=Flagellar M-ring protein; chromosome CDS1398811 1560 - 0.571154
NA Pcar_0721 preprotein translocase, SecY subunitRecName: Full=Protein translocase subunit SecY; chromosome CDS861964 1308 + 0.503823
NA Pcar_1505 MotA/TolQ/ExbB proton channel family domain protein chromosome CDS1759834 621 + 0.542673
NA Pcar_1151 putative anti-sigma-28 factor, FlgMSubName: Full=Negative regulator of flagellin synthesis FlgM; chromosome CDS1348972 300 - 0.546667
NA Pcar_0868 hypothetical proteinSubName: Full=Type IV pilus biogenesis protein PihJ; chromosome CDS1023775 537 + 0.554935
NA Pcar_2058 P pilus assembly protein chaperone PapD-likeSubName: Full=Sigma-fimbria biogenesis chaperone protein; chromosome CDS2397532 792 - 0.527778
NA Pcar_2454 lipoprotein signal peptidaseRecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; Short=SPase II; chromosome CDS2889443 486 - 0.578189
NA Pcar_0688 preprotein translocase, SecE subunitRecName: Full=Protein translocase subunit SecE; chromosome CDS836937 189 + 0.550265
NA Pcar_2323 preprotein translocase, SecA subunitRecName: Full=Protein translocase subunit SecA; chromosome CDS2716394 2691 - 0.543664
NA Pcar_1754 Flp pilus assembly protein TadC-likeSubName: Full=Flp pilus inner membrane protein TadC, putative; chromosome CDS2051908 981 + 0.492355
NA Pcar_1655 hypothetical proteinSubName: Full=Biopolymer transport membrane proton channel, TolQ-related protein; chromosome CDS1933560 672 - 0.459821
NA Pcar_1506 TolR proteinSubName: Full=Biopolymer transport membrane protein, TolR-related protein; chromosome CDS1760458 411 + 0.525547
NA Pcar_3077 hypothetical proteinSubName: Full=GspIIEN domain protein; chromosome CDS3589677 1053 + 0.594492
NA Pcar_0363 conserved hypothetical proteinSubName: Full=CpxP superfamily protein; chromosome CDS451688 543 + 0.581952
NA Pcar_0128 conserved hypothetical proteinSubName: Full=Type II secretion system pseudopilin TklG; chromosome CDS157374 513 - 0.549708
NA Pcar_1819 probable bacteriophage-related proteinSubName: Full=Peptidase, S49 family; chromosome CDS2127522 1152 - 0.579861
NA Pcar_1193 Flagellar hook-basal body protein-likeRecName: Full=Flagellar hook-basal body complex protein FliE; chromosome CDS1400644 300 - 0.526667
NA Pcar_1753 putative membrane proteinSubName: Full=Flp pilus inner membrane protein TadB, putative; chromosome CDS2050919 978 + 0.488753
NA Pcar_1689 ATP-dependent clp protease, proteolytic subunit ClpPRecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; chromosome CDS1972097 585 - 0.509402
NA Pcar_0132 hypothetical proteinSubName: Full=Type II secretion system ATPase PulM, putative; chromosome CDS165998 921 + 0.535288
NA Pcar_2057 P pilus assembly protein porin PapC-likeSubName: Full=Sigma-fimbria biogenesis outer membrane usher protein; chromosome CDS2395056 2505 - 0.544112
NA Pcar_3029 conserved hypothetical protein TIGR00427SubName: Full=Membrane protein, MarC family; chromosome CDS3540335 585 + 0.603419
NA Pcar_1747 flp pilus assembly protein, secretin CpaCSubName: Full=Flp pilus secretin RcpA; chromosome CDS2044555 1524 + 0.552493
NA Pcar_1684 type IV pilus biogenesis protein PilB, putativeSubName: Full=Type II secretion system ATPase PulE; chromosome CDS1964321 1734 - 0.509804
NA Pcar_0876 general secretion pathway protein GSubName: Full=Type IV pilus major pilin PihA; chromosome CDS1032067 381 + 0.553806
NA Pcar_1678 general secretion pathway protein GSubName: Full=Type II secretion system pseudopilin PulG; chromosome CDS1958909 492 - 0.534553
NA Pcar_0846 biopolymer transport protein (ExbD2)SubName: Full=Biopolymer transport membrane protein, TolR-related protein; chromosome CDS1000314 432 - 0.618056
NA Pcar_2143 hypothetical proteinSubName: Full=Geopilin; chromosome CDS2494574 558 - 0.496416
NA Pcar_1190 flagellar assembly protein fliH, putativeSubName: Full=Flagellar assembly protein FliH; chromosome CDS1397042 726 - 0.57989
NA Pcar_2061 hypothetical proteinSubName: Full=Repeat-containing protein; chromosome CDS2400387 1071 - 0.553688
NA Pcar_1111 Flagellin-specific chaperone FliS-likeSubName: Full=Flagellin export facilitator protein FliS; chromosome CDS1306727 432 - 0.513889
NA Pcar_0848 transport protein TolQ-likeSubName: Full=Biopolymer transport membrane proton channel, TolQ-related protein; chromosome CDS1001439 1413 - 0.618542
NA Pcar_1749 conserved hypothetical proteinSubName: Full=Flp pilus minor pilin TadE; chromosome CDS2046459 456 + 0.467105
NA Pcar_3093 outer membrane efflux family proteinSubName: Full=Efflux pump, RND family, outer membrane lipoprotein; chromosome CDS3607576 1512 + 0.62963
NA Pcar_0648 SURF1 domain proteinSubName: Full=Uncharacterized protein; chromosome CDS783190 453 + 0.554084
NA Pcar_0389 putative MSHA biogenesis protein MshGSubName: Full=Type IV pilus inner membrane protein MshG; chromosome CDS479590 1227 + 0.620212
NA Pcar_2155 Tfp pilus assembly protein tip-associated adhesin PilY1-like chromosome CDS2509878 4746 - 0.498314
NA Pcar_0131 type IV pilus biogenesis protein PilB, putativeSubName: Full=Type II secretion system ATPase PulE; chromosome CDS164265 1737 + 0.559586
NA Pcar_0873 pilus assembly protein PilCSubName: Full=Type IV pilus inner membrane protein PihG; chromosome CDS1029398 1212 + 0.592409
NA Pcar_2319 hypothetical proteinSubName: Full=PilZ domain protein; chromosome CDS2712408 771 + 0.526589
NA Pcar_1893 preprotein translocase, YajC subunitSubName: Full=Preprotein translocase, YajC subunit; chromosome CDS2208598 312 - 0.50641
NA Pcar_2912 conserved hypothetical proteinSubName: Full=Outer membrane channel, putative; chromosome CDS3399478 1602 - 0.593009
NA Pcar_2138 type IV pilus biogenesis protein PilM chromosome CDS2489552 1107 - 0.441734
NA Pcar_1168 probable flagellar motor switch protein (FliN)SubName: Full=Flagellar motor switch protein FliN; chromosome CDS1363570 312 - 0.557692
NA Pcar_0393 hypothetical proteinSubName: Full=Type IV pilus minor pilin MshD, putative; chromosome CDS482604 450 + 0.56
NA Pcar_1752 cpaF1, RSc0652; probable secretion ATPase proteinSubName: Full=Flp pilus assembly ATPase TadA; chromosome CDS2049554 1356 + 0.523599
NA Pcar_1334 preprotein translocase, SecG subunitSubName: Full=Preprotein translocase, SecG subunit; chromosome CDS1559128 354 + 0.570621
NA Pcar_2354 Signal recognition particle GTPase-likeRecName: Full=Signal recognition particle receptor FtsY; Short=SRP receptor; chromosome CDS2763281 1419 - 0.580691
NA Pcar_2159 putative type-4 fimbrial pilin related signal peptide protein chromosome CDS2516846 621 - 0.520129
NA Pcar_0865 hypothetical proteinSubName: Full=Type IV pilus minor pilin PihP; chromosome CDS1018527 1125 + 0.582222
NA Pcar_2390 biopolymer transport protein (ExbD2)SubName: Full=Biopolymer transport membrane protein, TolR-related protein; chromosome CDS2815261 402 - 0.58209
NA Pcar_1163 related to flagellar biosynthetic protein (FlhB)SubName: Full=Flagellar biogenesis protein FlhB; chromosome CDS1360302 1056 - 0.580492
NA Pcar_2225 signal recognition particle proteinRecName: Full=Signal recognition particle protein; AltName: Full=Fifty-four homolog; chromosome CDS2595956 1356 - 0.553835
NA Pcar_0872 type IV pilus biogenesis protein PilBSubName: Full=Type IV pilus biogenesis ATPase PihE; chromosome CDS1027741 1647 + 0.603522