Gene list
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COG category: Intracellular trafficking and secretion
Organism: Pelobacter carbinolicus DSM 2380, DSM 2380
Number of genes found: 120
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| Pelobacter carbinolicus DSM 2380, DSM 2380 | ||||||||
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| Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | Pcar_0130 | type IV pilus biogenesis protein PilC, putative | chromosome | CDS | 163051 | 1206 | + | 0.541459 |
| NA | Pcar_0721 | preprotein translocase, SecY subunit | chromosome | CDS | 861964 | 1308 | + | 0.503823 |
| NA | Pcar_0848 | transport protein TolQ-like | chromosome | CDS | 1001439 | 1413 | - | 0.618542 |
| NA | Pcar_0648 | SURF1 domain protein | chromosome | CDS | 783190 | 453 | + | 0.554084 |
| NA | Pcar_2454 | lipoprotein signal peptidase | chromosome | CDS | 2889443 | 486 | - | 0.578189 |
| NA | Pcar_2391 | MotA/TolQ/ExbB proton channel family protein | chromosome | CDS | 2815662 | 705 | - | 0.592908 |
| NA | Pcar_2138 | type IV pilus biogenesis protein PilM | chromosome | CDS | 2489552 | 1107 | - | 0.441734 |
| NA | Pcar_2323 | preprotein translocase, SecA subunit | chromosome | CDS | 2716394 | 2691 | - | 0.543664 |
| NA | Pcar_0458 | hypothetical protein | chromosome | CDS | 558223 | 801 | - | 0.56804 |
| NA | Pcar_1752 | cpaF1, RSc0652; probable secretion ATPase protein | chromosome | CDS | 2049554 | 1356 | + | 0.523599 |
| NA | Pcar_0136 | type II secretion system protein, putative | chromosome | CDS | 168727 | 2340 | + | 0.493162 |
| NA | Pcar_1716 | metal ion efflux outer membrane protein family protein, putative | chromosome | CDS | 2007067 | 1362 | - | 0.520558 |
| NA | Pcar_0688 | preprotein translocase, SecE subunit | chromosome | CDS | 836937 | 189 | + | 0.550265 |
| NA | Pcar_1163 | related to flagellar biosynthetic protein (FlhB) | chromosome | CDS | 1360302 | 1056 | - | 0.580492 |
| NA | Pcar_0868 | hypothetical protein | chromosome | CDS | 1023775 | 537 | + | 0.554935 |
| NA | Pcar_1749 | conserved hypothetical protein | chromosome | CDS | 2046459 | 456 | + | 0.467105 |
| NA | Pcar_3027 | Multiple antibiotic transporter-like | chromosome | CDS | 3538721 | 627 | - | 0.562998 |
| NA | Pcar_0393 | hypothetical protein | chromosome | CDS | 482604 | 450 | + | 0.56 |
| NA | Pcar_2975 | tolB protein | chromosome | CDS | 3485148 | 1332 | - | 0.603604 |
| NA | Pcar_2139 | type 4 prepilin-like proteins leader peptide processing enzyme | chromosome | CDS | 2491293 | 780 | - | 0.458974 |
| NA | Pcar_0396 | hypothetical protein | chromosome | CDS | 484521 | 3921 | + | 0.597297 |
| NA | Pcar_2912 | conserved hypothetical protein | chromosome | CDS | 3399478 | 1602 | - | 0.593009 |
| NA | Pcar_1189 | probable flagellum-specific ATP synthase (FliI) | chromosome | CDS | 1395741 | 1302 | - | 0.624424 |
| NA | Pcar_1190 | flagellar assembly protein fliH, putative | chromosome | CDS | 1397042 | 726 | - | 0.57989 |
| NA | Pcar_1891 | putative preprotein translocase subunit SecF | chromosome | CDS | 2205857 | 924 | - | 0.528139 |
| NA | Pcar_2154 | fimbrial protein pilin | chromosome | CDS | 2509412 | 417 | - | 0.489209 |
| NA | Pcar_0814 | multidrug efflux system outer membrane subunit | chromosome | CDS | 960585 | 1440 | + | 0.634028 |
| NA | Pcar_2319 | hypothetical protein | chromosome | CDS | 2712408 | 771 | + | 0.526589 |
| NA | Pcar_0863 | hypothetical protein | chromosome | CDS | 1016592 | 1188 | + | 0.587542 |
| NA | Pcar_0142 | outer membrane protein, putative | chromosome | CDS | 175839 | 1809 | + | 0.609729 |
| NA | Pcar_1819 | probable bacteriophage-related protein | chromosome | CDS | 2127522 | 1152 | - | 0.579861 |
| NA | Pcar_2058 | P pilus assembly protein chaperone PapD-like | chromosome | CDS | 2397532 | 792 | - | 0.527778 |
| NA | Pcar_0872 | type IV pilus biogenesis protein PilB | chromosome | CDS | 1027741 | 1647 | + | 0.603522 |
| NA | Pcar_0386 | MSHA biogenesis protein MshM | chromosome | CDS | 475536 | 846 | + | 0.58156 |
| NA | Pcar_1881 | signal peptide peptidase SppA, 36K type | chromosome | CDS | 2194247 | 897 | - | 0.502787 |
| NA | Pcar_1655 | hypothetical protein | chromosome | CDS | 1933560 | 672 | - | 0.459821 |
| NA | Pcar_0094 | Sec-independent protein translocase TatC | chromosome | CDS | 112226 | 753 | + | 0.577689 |
| NA | Pcar_2158 | Tfp pilus assembly protein PilV-like | chromosome | CDS | 2516388 | 468 | - | 0.512821 |
| NA | Pcar_1168 | probable flagellar motor switch protein (FliN) | chromosome | CDS | 1363570 | 312 | - | 0.557692 |
| NA | Pcar_2057 | P pilus assembly protein porin PapC-like | chromosome | CDS | 2395056 | 2505 | - | 0.544112 |
| NA | Pcar_1101 | outer membrane protein OprN precursor | chromosome | CDS | 1296119 | 1413 | + | 0.599434 |
| NA | Pcar_1166 | flagellar biosynthetic protein FliP | chromosome | CDS | 1362441 | 747 | - | 0.563588 |
| NA | Pcar_2136 | type IV pilus biogenesis protein PilO | chromosome | CDS | 2488369 | 612 | - | 0.428105 |
| NA | Pcar_1617 | signal peptidase I | chromosome | CDS | 1890455 | 660 | - | 0.510606 |
| NA | Pcar_2977 | TolR protein | chromosome | CDS | 3487357 | 435 | - | 0.595402 |
| NA | Pcar_1505 | MotA/TolQ/ExbB proton channel family domain protein | chromosome | CDS | 1759834 | 621 | + | 0.542673 |
| NA | Pcar_2406 | twitching motility protein PilT | chromosome | CDS | 2831134 | 1167 | + | 0.567267 |
| NA | Pcar_3143 | membrane protein, putative | chromosome | CDS | 3663225 | 1629 | - | 0.476366 |
| NA | Pcar_0870 | Type II secretory pathway component PulD-like | chromosome | CDS | 1024695 | 1821 | + | 0.590335 |
| NA | Pcar_2157 | type IV pilus assembly protein PilW | chromosome | CDS | 2515330 | 1041 | - | 0.51489 |
| NA | Pcar_2147 | type IV pilus biogenesis protein PilC | chromosome | CDS | 2499367 | 1218 | - | 0.470443 |
| NA | Pcar_0388 | type II secretory pathway, ATPase | chromosome | CDS | 477834 | 1785 | + | 0.605602 |
| NA | Pcar_0408 | DNA processing protein DprA | chromosome | CDS | 499874 | 1101 | - | 0.613079 |
| NA | Pcar_2149 | type IV pilus biogenesis protein PilB | chromosome | CDS | 2501930 | 1701 | - | 0.536743 |
| NA | Pcar_0389 | putative MSHA biogenesis protein MshG | chromosome | CDS | 479590 | 1227 | + | 0.620212 |
| NA | Pcar_0289 | outer membrane efflux protein | chromosome | CDS | 360647 | 1425 | + | 0.564912 |
| NA | Pcar_1162 | probable flagellar biosynthesis protein (FlhA) | chromosome | CDS | 1358140 | 2085 | - | 0.580336 |
| NA | Pcar_0161 | membrane protein, MarC family | chromosome | CDS | 202655 | 633 | + | 0.628752 |
| NA | Pcar_2134 | type IV pilus biogenesis protein PilQ | chromosome | CDS | 2485210 | 2625 | - | 0.471238 |
| NA | Pcar_0363 | conserved hypothetical protein | chromosome | CDS | 451688 | 543 | + | 0.581952 |
| NA | Pcar_1678 | general secretion pathway protein G | chromosome | CDS | 1958909 | 492 | - | 0.534553 |
| NA | Pcar_1111 | Flagellin-specific chaperone FliS-like | chromosome | CDS | 1306727 | 432 | - | 0.513889 |
| NA | Pcar_1754 | Flp pilus assembly protein TadC-like | chromosome | CDS | 2051908 | 981 | + | 0.492355 |
| NA | Pcar_2978 | TolQ protein | chromosome | CDS | 3487793 | 672 | - | 0.563988 |
| NA | Pcar_2155 | Tfp pilus assembly protein tip-associated adhesin PilY1-like | chromosome | CDS | 2509878 | 4746 | - | 0.498314 |
| NA | Pcar_2148 | twitching motility protein PilT | chromosome | CDS | 2500710 | 1125 | - | 0.541333 |
| NA | Pcar_0847 | Biopolymer transport proteins-like | chromosome | CDS | 1000733 | 636 | - | 0.619497 |
| NA | Pcar_1679 | type II secretion system protein, putative | chromosome | CDS | 1959401 | 2304 | - | 0.536458 |
| NA | Pcar_0505 | twitching motility protein PilT | chromosome | CDS | 615098 | 1044 | - | 0.552682 |
| NA | Pcar_1165 | probable flagellar biosynthetic protein (FliQ) | chromosome | CDS | 1362143 | 270 | - | 0.574074 |
| NA | Pcar_2135 | putative type IV pilus assembly protein PilP | chromosome | CDS | 2487836 | 534 | - | 0.477528 |
| NA | Pcar_1506 | TolR protein | chromosome | CDS | 1760458 | 411 | + | 0.525547 |
| NA | Pcar_2390 | biopolymer transport protein (ExbD2) | chromosome | CDS | 2815261 | 402 | - | 0.58209 |
| NA | Pcar_1193 | Flagellar hook-basal body protein-like | chromosome | CDS | 1400644 | 300 | - | 0.526667 |
| NA | Pcar_2061 | hypothetical protein | chromosome | CDS | 2400387 | 1071 | - | 0.553688 |
| NA | Pcar_2159 | putative type-4 fimbrial pilin related signal peptide protein | chromosome | CDS | 2516846 | 621 | - | 0.520129 |
| NA | Pcar_0385 | putative MSHA biogenesis protein MshL | chromosome | CDS | 473890 | 1614 | + | 0.586741 |
| NA | Pcar_0381 | Tfp pilus assembly protein ATPase PilM-like | chromosome | CDS | 471180 | 957 | + | 0.592476 |
| NA | Pcar_0865 | hypothetical protein | chromosome | CDS | 1018527 | 1125 | + | 0.582222 |
| NA | Pcar_0364 | Outer membrane protein-like | chromosome | CDS | 452227 | 1503 | + | 0.578177 |
| NA | Pcar_1334 | preprotein translocase, SecG subunit | chromosome | CDS | 1559128 | 354 | + | 0.570621 |
| NA | Pcar_1164 | related to flagellar biosynthetic protein (FliR) | chromosome | CDS | 1361367 | 777 | - | 0.57529 |
| NA | Pcar_3077 | hypothetical protein | chromosome | CDS | 3589677 | 1053 | + | 0.594492 |
| NA | Pcar_1746 | putative pilus assembly-related, exported protein | chromosome | CDS | 2043709 | 819 | + | 0.525031 |
| NA | Pcar_1303 | general secretion pathway protein-related protein | chromosome | CDS | 1526024 | 912 | + | 0.536184 |
| NA | Pcar_2874 | probable outer membrane channel lipoprotein | chromosome | CDS | 3359511 | 1515 | - | 0.551815 |
| NA | Pcar_0667 | outer membrane protein | chromosome | CDS | 807391 | 1437 | + | 0.607516 |
| NA | Pcar_3003 | Outer membrane protein-like | chromosome | CDS | 3512810 | 2451 | - | 0.610363 |
| NA | Pcar_0876 | general secretion pathway protein G | chromosome | CDS | 1032067 | 381 | + | 0.553806 |
| NA | Pcar_2156 | type IV pilus assembly protein PilX | chromosome | CDS | 2514769 | 537 | - | 0.538175 |
| NA | Pcar_2143 | hypothetical protein | chromosome | CDS | 2494574 | 558 | - | 0.496416 |
| NA | Pcar_2738 | hypothetical protein | chromosome | CDS | 3197754 | 1299 | - | 0.602002 |
| NA | Pcar_1685 | type IV pilus biogenesis protein PilC, putative | chromosome | CDS | 1966073 | 1209 | - | 0.502895 |
| NA | Pcar_0131 | type IV pilus biogenesis protein PilB, putative | chromosome | CDS | 164265 | 1737 | + | 0.559586 |
| NA | Pcar_1868 | PilB-like protein | chromosome | CDS | 2182027 | 600 | - | 0.526667 |
| NA | Pcar_0093 | Sec-independent protein secretion pathway components-like | chromosome | CDS | 111964 | 270 | + | 0.603704 |
| NA | Pcar_1684 | type IV pilus biogenesis protein PilB, putative | chromosome | CDS | 1964321 | 1734 | - | 0.509804 |
| NA | Pcar_1747 | flp pilus assembly protein, secretin CpaC | chromosome | CDS | 2044555 | 1524 | + | 0.552493 |
| NA | Pcar_1892 | protein-export membrane protein SecD | chromosome | CDS | 2206791 | 1602 | - | 0.566167 |
| NA | Pcar_1681 | hypothetical protein | chromosome | CDS | 1962338 | 555 | - | 0.50991 |
| NA | Pcar_1683 | hypothetical protein | chromosome | CDS | 1963437 | 888 | - | 0.531532 |
| NA | Pcar_0128 | conserved hypothetical protein | chromosome | CDS | 157374 | 513 | - | 0.549708 |
| NA | Pcar_2225 | signal recognition particle protein | chromosome | CDS | 2595956 | 1356 | - | 0.553835 |
| NA | Pcar_1015 | Outer membrane protein-like | chromosome | CDS | 1189947 | 1467 | - | 0.523517 |
| NA | Pcar_2126 | outer membrane efflux protein | chromosome | CDS | 2476605 | 1527 | - | 0.561886 |
| NA | Pcar_1893 | preprotein translocase, YajC subunit | chromosome | CDS | 2208598 | 312 | - | 0.50641 |
| NA | Pcar_1151 | putative anti-sigma-28 factor, FlgM | chromosome | CDS | 1348972 | 300 | - | 0.546667 |
| NA | Pcar_0126 | conserved hypothetical protein | chromosome | CDS | 155770 | 663 | - | 0.542986 |
| NA | Pcar_0873 | pilus assembly protein PilC | chromosome | CDS | 1029398 | 1212 | + | 0.592409 |
| NA | Pcar_1753 | putative membrane protein | chromosome | CDS | 2050919 | 978 | + | 0.488753 |
| NA | Pcar_0132 | hypothetical protein | chromosome | CDS | 165998 | 921 | + | 0.535288 |
| NA | Pcar_0871 | ATPases involved in pili biogenesis, PilT like | chromosome | CDS | 1026597 | 1137 | + | 0.620053 |
| NA | Pcar_0138 | hypothetical protein | chromosome | CDS | 171496 | 450 | + | 0.542222 |
| NA | Pcar_1192 | related to flagellar M-ring protein (FliF) | chromosome | CDS | 1398811 | 1560 | - | 0.571154 |
| NA | Pcar_2354 | Signal recognition particle GTPase-like | chromosome | CDS | 2763281 | 1419 | - | 0.580691 |
| NA | Pcar_1689 | ATP-dependent clp protease, proteolytic subunit ClpP | chromosome | CDS | 1972097 | 585 | - | 0.509402 |
| NA | Pcar_0846 | biopolymer transport protein (ExbD2) | chromosome | CDS | 1000314 | 432 | - | 0.618056 |
| NA | Pcar_2137 | type IV pilus biogenesis protein PilN | chromosome | CDS | 2488977 | 579 | - | 0.438687 |
| NA | Pcar_3093 | outer membrane efflux family protein | chromosome | CDS | 3607576 | 1512 | + | 0.62963 |
| NA | Pcar_3029 | conserved hypothetical protein TIGR00427 | chromosome | CDS | 3540335 | 585 | + | 0.603419 |
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