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# Carboxydothermus hydrogenoformans Z-2901, Z-2901

>CHY_0870 twin-arginine translocation protein, TatA/E family
MFGNFGWQELLIVLVIALIIFGPSKLPELGKAFGQTVKEFRKGAKEIQDE
IALEEAKEEKQA
>CHY_0641 hypothetical protein
MPFWEKLAPRERILVGIALGLTVFYLLYYYAIMPNWQKYQELKTELNTVN
AEWERLQGIENVLATEVKNKEQLEKELKNIRAEFDFNVEDGAGFTKLLAS
AKEKNIRLLEFKPGSVVDKSYYFEFPVEIKVQGYYPQVLEYVESLENFPD
LAEIKNLTISSVPGDVRGNVEAAFTLAIYSAKNPAGSLIIQNYEKLSTGK
YNPFRPMYIPPVATTPATNNNPPGNNTGSGATVPGEIYNNNTDEEPLVK
>CHY_1005 flagellar biosynthetic protein FliP
MAAKNKKLLITGILLILTLGVSSLALAEPLTIPNIQLNINGQGSPQEVVN
SVKLLVLLTVLALVPAFLLLMTSFTRIVVVLSLLRNAMGTQQAPPNQVLI
GLALFLTIFIMSPVINKINQDAIQPYLNNQITQEQAIRAAEAPLKDFMLK
QTREKDLALFIELAKLPRPQTKDDVPFTVVVPAFIISELKTAFQMGFMLF
LPFLIIDMVVASILMSMGMFMIPPMLVALPFKLLLFVLADGWYLVVKSLV
SSFS
>CHY_1020 flagellar motor switch protein
MDNQFLSQEEIDALLRSEPVPSESEGSGTGIILTDAEKDALGEAGNISMG
SAATSLSQLVGRKVIITSPRVEVQKEKEFFASFREPYMVIEVEFTEGLSG
KNVLIIKENEVGVIASLMMGGDGTHSGEITELEQSAAQEAMNQMIASSAT
ALSEIFKRKINISPPRSKMINSRENDTYEPFGGHEVVVIYFNMQIEDLVD
TDIMQVMEPATAKEVAQMLLAKVYGSPETEPAVMAHEMLEGAKATNIEKK
VEKAEEQFVLPTDEKLELILDIPLKVEVVLGRTRRPIKEILSFGPGAIID
LDQLVDEDVEVLVNGTLVAKGEIVVVGENFGIKINQILSPKERLSKI
>CHY_0637 prepilin peptidase domain protein
MKDKGFTLVELLVVLVIGSIIMLVVFNLFVFTYNLWFKGQKAIDYQEQLR
FAMDRMAREIRTASAVYNPYVNPPSPGTAYTQVYLVNTVNNETYRVYYYL
NSLNKTLYRKVYYPNNNQTTDPLISDVNFTVYYLGYDAVTNKIYNLKLNL
SLINKPSATLSTSVVTRVTR
>CHY_2325 preprotein translocase, SecE subunit
MGAAGKEISKTEAGKETRKASKAGEGAWVKTQQYFRSVWAEVKKVHWPTR
NESIVYTGVVFLTVIIVGLIIWLFDSFLSFFLNLLLK
>CHY_0182 hypothetical protein
MKKLWIFCLIVTLLVNLTGCPDKKRRPVLPKVFLVVAKTQQERKNFIQTA
YNLAREKKIALTVRGLNDDEKREEKVLKKIIAQKPKGVIWETAGSPRAGY
LAQKIYPKAKLIFINDVPYDGLGDCAVLPDFQKAAVMVAQNIALKDKTGK
VLLLGSHRQTLSVFTLEKALKNELRTLGKEVTVGKLPVVAGERALDEIRN
LARSQSIIALDGKVGELLAEEGMKEQQGTVMASMVLTRKVAKAIKEGKIL
SSVDFMPEIVANKALEAMDRVLQKRGIDADSKIAVKNGQIPVIYTPVQLI
TRENVQQLQKAYGKFTSSTPKEKEESKSKEIKTTKVKITTNRGKTVELTV
EGEITKIETSPEEGKKDEQAGQEKTGEESGVGHNR
>CHY_1252 ISChy3, orf3
MFEHFFGFHRTPFGRDLPVNSLFTTPAHEELVSRLKYAAEKRLFALITGE
VGAGKSTALRQLLSLLNPNKYRVIYISDSGLTPRHFYWEALRQLDCEPRF
NRGQAKRQLHQVILDLAENQQKIPVVIVDEAHLLDREMLEEIRFLLNFRM
DSYNPMSLILVGQPELRRILQLQVYEAIAQRINLRYHLPPMEREEAKGYV
AHHLRTAGASSAIFTDDALDMVYEYAGGIARKINNLCIACLMAAAAEQKR
LIDDRMVKVVIENEFSV
>CHY_1795 putative DNA proccessing protein DprA
MQNSDYYLTLASVYYNQKLFHLIKEGIPVEEIVVNPVKTLKEFGFSPTEI
NSLTRKISEFNPERVKEHCSNLGIKIVTFGEKRYPERLLHLYDPPVVLFC
WGNLELLKTPMVGIVGARRASSYGLKVARAFAEEIAGAGITVISGLARGI
DGEAHRGAVSAGATVAVLGSGIDVPYPRENENLYREIIQKGLIISEFLPG
TMPLPYLFPIRNRLIAALAEGIVVVEAALKSGSLITARIALELGREVFAV
PGMITSPLSAGSNLLLKDGARIALKGTEVIEELGFGTLFSNSFAAQRSKQ
EAFGLAGKILEVLVNEDLTVEEIAYRLNARVSEVLREISFLEIKGFVKKQ
FGGKFTRG
>CHY_1003 flagellar motor switch protein FliN
MGIRDVDEFLKKMVDDVPTYRKPEFSPLEPVPTGQRKLPMSLLNNIKMEI
VARMGTTELTVRQLLALKEGDVLELDKSIGDLIDLFIDGRRFAVGEVVVI
NEMYGVRITGYSDEDTGKEAKKIG
>CHY_2643 ISChy3, orf3
MFEHFFGFHRTPFGRDLPVNSLFTTPAHEELVSRLKYAAEKRLFALITGE
VGAGKSTALRQLLSLLNPNKYRVIYISDSGLTPRHFYWEALRQLDCEPRF
NRGQAKRQLHQVILDLAENQQKIPVVIVDEAHLLDREMLEEIRFLLNFRM
DSYNPMSLILVGQPELRRILQLQVYEAIAQRINLRYHLPPMEREEAKGYV
AHHLRTAGASSAIFTDDALDMVYEYAGGIARKINNLCIACLMAAAAEQKR
LIDDRMVKVVIENEFSV
>CHY_2649 hypothetical protein
MGKIQPFQHRLYKYNEICYPKDSFEASKLAMAVMVKIKAYGGTVSLEHYG
QLRTVAKILLFPLIDSSKPVVVPMETGLGKSTMIEEFLRLKLDDDFNNFG
AIVVKERIKDILALEEKLKGKARAVYSFYPDHCLQGYKEYQRIACRNCDA
DCRMKKAVSEQKNYPVLLMSSERFRLEMLYGRHLRDFLAFCDKDGIEHKR
NILIIDEKPPLAINKPVNRKDIRKAYEVIRYIQPGSELYEEAQHLMSHLK
KLNTVLNDLDFTSPFLSALEPCFKLSDKFKSFFEEAYTENDVEILECIAS
LIRKGGILRAEETKIGLEAQAITTDYIEFAKLDGLKTIIFDATAKYDAEY
KEGQFAILDLPQIRNYDNLTIYNCPVNLSRTNIFSKKSSARFDFKKLFQD
LEGIKDKEVFILTYQKLVNTIKKELMDTMFYKNNRVYIDHFNNIKGKNIY
ANCTVMLNIGINHKGDEYYLAKAVSVSNKQDFDDLSSADDKAVVLAEKVK
RVIESDLFTEMIQNFCRTALRKSTNEQVQIYSFIGEPVLLELLTTYFPNA
KIETWYPEEFYKHYLTHGSKRNKKVLQLGEFLKTQFSQKSIITKKEVREA
LGYTDQDTLANHLKIGYVKNLMKKMNIEEKYHHLQKRQV
>CHY_1799 conserved hypothetical protein
MRAAFSLTVAEGKRLIAKGIKKHPAVAKAFKEGIVVIAGGTTNGYIVEEL
TGREIEREWYTAGVITPKGQCVTDPGRRIPPVVLERGQVSELSWQDALEK
MGRDDVFLKGANAIDAEGFAGIITSDSRGGTIGRAYPLIRARGIRLIIPV
GLEKMVPSVRKAAELTGIYTIDKALGQKFGYTVIGDGEIFTEISALKLLF
PNIEVVVVGSGGIGGAEGGKTFIVEGNEDEVVELLSLIKTIKGEPALKDS
KRNCPCDVPCDRIRN
>CHY_0445 conserved hypothetical protein
MDTGQRAKPVLKIISAILLGLMAWVVPYLPIKLLLVLLAILLIGLGLPRS
RISFIILSSIVVVFSFFTNPNFIGQAANWPAWLSDFGSWKSYTNSFDSAQ
MKNFDIEKYFSKTRVNPDKRVRLTAKTVEIDTDCGVEISLVEGDYIEYPA
ELRLSQKGDIAVISGGQRGDVTYVIRLGKDNLKNLKISAAGVKLKGEGNF
EEVFIDCAGAYLSSDLNVKNLNINAAGLMLNGNFAGDNLEVDGMGMELRG
TYRFNNMKIDGMGAEVNMKVALKELTVDSLAINGRIEITAKPNDEAKIKL
NSLAGNITLKNLDGVVLEHSGFTKINRE
>CHY_2570 twin-arginine translocation protein, TatA/E family
MFNSIGIPELLIILVIALVIFGPAKLPEIGRAFGKTIKEFKKEATEIQKE
ING
>CHY_2523 hypothetical protein
MAKLKHKKPIAILTIVAFLLSMLPAVAFGAVTSATLNPTNYISTTVPLTI
TLGDVPALNDVITVELTKNSTTYTAIYTIAQADVDAGRKDYVFNISDFKD
TSSNVVPFGSGYSLSVKYTPSGGTATEIASSSSFNVIPAVASVTPTAWNE
AKVDLVVYDGSNGITSGSVIAVYLDSNTYESAFIDKSNVSSFTFYVNRTT
GDHNYTVKYITGSNNYVLATGIIPKINPYANAVGSADGKATLNITKPESN
NLYVGQSVTSIEGTTDKDAVVDVYVLAEDTKITNAPIVWDVISATVNPNT
GTFIADLSDNFYKNEDVIFAVVAKSSKGTTVKYITHGYKFDGSQSIASPV
IGQEVKISGTVFKYDETSSKYVVAQETSYNAFEVYYSNGATPYNRVTGDS
NYYSSIGTVGVAANGTVNFYITPKVAGKYLFVLRELGYYELTVSGKTATA
TLESATAYEGRNYKLTLKSLKVGDTSVSGSTYYVVIEGVPVADSIGTNNK
FVKYTTTPVDPFVSSDVRTDSVGNKVYDKVVLKFTANPDLSGLVFKGTGT
AKVTIYALNTKTIFDQKGYDFTSGNSAIKAVYVSASGAGMTPVNNIELKA
GAMTVTTNTIKIGGSVNITVNAKVTVNGTDTWVTKTVSIPVKGFVPTVSV
SQSIYDQETALTVTVKDVNGNPINNAIIAFDKTDIKVKGSDGTFKDAAVV
NDKDTIVDGTVTNITDGNYSATIKADTPGSTNIYVIVMKKLADGTTTYET
WAKVPYTFLGYEKYTVTADKTALLANYPENVKITVKDGANVVTGTGFKVS
LKHSDTTASISQNSLSDLNNVTLDSTGSFTLGNLNVSKPGTLTITVTSNN
GTSFGTVKIDVVAPKVVLTPSDNVITDSVKESIKAVIYDPRNNAEIKLPI
DFAIVKDSENTNTLSVLSVYQKDGKTIATDSDKQGASTYEFVILAQYNKD
AKAAPQFEVKVNGIKVATFDVKPAVVAVSSDKVTVAVPKAITVTAKDAHG
KALAGYVVTLSGAGVSQELTLDSNGQVTTYIQSNATGDINVELKDVANET
IAKIKSDVFVDTQAPVITVTAPEKVEVPYVDVTVKVTDNDKVAALAVNNA
AVALVAPAAEVNKVVRVNLVEGDNTIVVEAADLAGNVASKTITVKYEKPV
TPPPANNGGNTNTGDKYSKYVGQMVQLTYTKTNLRVAPQANAKILAVLKK
GYKMRYLGREGVWNKVRVSIWSNGGYKTYTGYIYDPNFWTLTSVQ
>CHY_0863 sec-independent protein translocase protein TatC
MEDKPMTLFEHLEALRKVIIISVIAIVIGSIIAYNYVDYFLNILLQPVTA
LKMKLVFINVTEAFMTKLKIAIILGIILASPIILWQIWSFVAPGLKPAER
KFILRMIPVIIILFVAGIVFAFFTVFQIATRFLLQFGGDIMSPMITIGKY
ISFALNFLIPFGLVFELPVVVYILAKLNIISHEFLVKNRKYALLVVFILA
AALTPGPDVISQLLMAAPLLILYEVSIFIAKFIKPKEFSGERK
>CHY_2463 hypothetical protein
MKAATKVLTLLVLFIFILGNITLASGGHDSVTNDSSMFSGNMEMSKDNMN
NNKQNTLSAENTDMSNDSTDDHQQSGMDSHEASDSHASSDIPWSFLKVIG
ILNTGIILTGLISRYLPEREELKNESGT
>CHY_2528 bacterial Ig-like domain protein
MIRLKGKKAIAIITMATFLLTMLPAFVLASTPAKYVLTLSPTTVRPGTTA
TLVSGSVVDIYGNKGVVTIVYTPAGGTEETFTSTLADGTFAKNYVFDKEG
DYTFQVKEGTDVSNVVTVLSRYDYTPDARGSYKVGDTNVILGGTIKGLPA
GRQMVLKHENDAIGVIGNSAVTDTGRFAISVPVFTYAGTYALGTANTDGT
NFVKYEEITVAPQTLAVTADKTALTGGSFDNNITFTAKPAVTVSGGTYYF
ELSGVKIDKNSVTGTTYGTVIDNTYYTKVAVSDSDGVLNLSNLKLLDTIG
TLTVKAYYQKDSVDFANGLYTENAELLGTLNIPVNPAAKVNVFTNVTSLA
ADTTTTLAVYVKDVNNKVYGDANSTLKDVKVTVTGPDVNASDSNKAEYSF
TVNPSQAGDVTVTVVATLTDNTQETKTLTIPVDGLKASLDAATVANLVYG
ATVSPKVTVTDKNGTPINNATVTISGPYTGSISGQTTNIVNGQYNFSAAA
LTDVTNFVVNVVDPSGKKARLTYPVLGSNVYTVTPDKATLIAGYDTEVSF
TVKEGAYGVTDNVNVAYTDLDGNSQTVNGVTYTNGKYTVSLGSLTKAGTI
NFKVISTDGKKYGTFTVNVKLPVIKVLAPADGILTDSQKEAVSYAVYSPI
DNTEITANTTVTLSVYDNSATFGVYDQSGNALKTVDGSAYNTGAPAKVTV
LATKNASYGYDGKLELSVNGIKVSELTVKPAVLTVNKTEVAVGSDNAVEA
TLKDAHGNPIKDATVTLNGSGVALTGTTDADGKVIFTVTPFATGKIVVDA
PAYANITKPEITAKFVVDDKKPVITIEAPATTDKETVDVNIKVTDEGKVA
GLLVNGQRIELVAPMVEVNKVVTVTLKEGKNTITVEAADVAGNIATATAD
VTYTKPVPPADNTNTGDKYSKFVGQMVKLTYSRTNLRLAPNGKLLVTLKT
GYKMRYLGREGVWNKVRVSIWMKGGYKTYTGYIYDPYFWALTKA
>CHY_0997 flagellar protein
MKKFSFRLANVEKIRTQEVEQQKRVVQEKIQAVRRQEEKINRIGESIAAE
LKIDSLLFREHQLERIEYLATEKWRLEKELERLINERERAKEEYLAKKIE
QKKMEVLKEKAKASYREELERENQSFLDEISLFGYIRRN
>CHY_2150 general secretion pathway domain protein
MKEKPVTSLEKQTKAPFTKEIKTADSFPSASYSEASARLLHLSGLPHLLD
KLTLNQKRPLAQRIAMSYKVKPLTREEVAGYTQHHMELAGANHNIFSEPA
IEAIASLSRGWPRLINKLATHCLLYGFQAKKEIIDAEVVRLAAQDTGF
>CHY_0865 twin-arginine translocation protein, TatA/E family
MFGNFGFQELVVVLIIALIIFGPSKLPELGRALGRGIREFKKATTEIEES
ITKEVNAVKDNNFKEG
>CHY_0218 doubled CXXCH domain protein
MKKAFLYILSLIFISIILIPNNVQANLLPVYGNNEQKGSYLPVQTKVYNN
VYGMVSAFNPDDLTNFPYEVYLPNENNPALYRVHSNFTKNTDSCASCHST
HTSVGPGLLQWYSDYATCMACHDGTVTTTYNVLDGKIQNSNVLTNSGVFG
RGKEEFLSAHNVSGIIEVSSVPGEVYISTAQADLNGDGINDRWSIPFTCT
SCHDPHGAGGNARLLSPNPNGQAYLNKKEGVLMAKISSTEYTVYPGATAN
SVGEVTYTPYRWLTGYEYERLTKISSNEGYIDPSYYTIDNSRGYTVIKFT
YAPTVPLYAYFVPAIRVVMGIENYLSIASDKPEKVTYISGISEFCASCHP
SYYTTVVGNTYSFTENYRHPVDITVYPELASTLSTVYNIKFEYDPVTGTF
SKINCLTCHTAHGVDQDYWLKTGTVPEEAYENTGSSALKRLPNMKSCVLC
HPDKTGYFMESPTPTNYYQGSSQYVGSLACKSCHQNYYKGWQKTAHARTI
GFGFNSIVADAVYPLEPSVNGFSYRFTYSGLNDFIASPGNLLYRLIDSTR
ADVYPEQVTLSVGFKWLQSYAVYDTTYNLLSRSFNVPAKKFTVFSGVYDL
NSCLGCHGTGFKVTTVNSETSEVTGYELVEMGVGCEACHGPGKNHTENPN
HYNIYNPKYQTPALRTSLCGQCHSKGISLLYRQQTVMGLTYREDFLPPVG
QRVYPWSEEWYTYGIIPGLNDPIYGTDNLGPYLVESSMPTPILSLQNLFY
PAVDGIYRDARAQNEYPAYRQSLHYKNGSLACNDCHNSHGTNLLGESLKT
TQGQLCSSCHDGTRMPAVDMPKTASLIDSIYLSSHTFGGYQP
>CHY_2465 conserved hypothetical protein
MRGLKVSLFDFFWFLLLLMSLIPMFKQQKIEVLRLKIIRDFETKRKSRLI
TMIHRQETFSFLGLPVSRYINIEDSEQILRAIRLTPDDMPIDLVLHTPGG
LVLAAEQIAEALRKHPAKVTVFIPHYAMSGGTLIALAADEIVMDENAVAG
PVDPQLGEYPAASILKVVEQKGPDKVEDRTLIMADIAKKALAQVENTVVE
LLSDKMDLEKAREVAKLLSQGTWTHDYPISAQQLKELGLPVSTDLPREIY
ELMDLYPQPQGRRPSVQYIPLPYGRNDLPK
>CHY_2519 general secretion pathway domain protein
MYRAFYSLTKAPFTKEIKTADSFLSTSFSETMARLEYLKKTRGIGLIAGE
PGAGKTFALRAFAESLNPSLYKVLYFPLSTGTVMDFYRGLAIALGEEPKF
RKVDLFHQIQTAVLRFFRERKITPVFILDEMQMAKDLFLCDINILFNFSM
DSENPFILILSGLPHLLDKLSLNQNRPLAQRIAMSYKVEPLTREEVAGYI
QHQMELAGAKHSIFSEQAIEAIASLSRGWPRLINKLATHCLLYGFQAKKE
IIDAEVVRLAAFWMLVSNLARSHFCGRFSFYFSLLKFCDILQKVLLAYQI
NLQFLQITATSYAILF
>CHY_0004 sporulation associated-membrane protein
MQPLIDAITWILNNLYLFTKSIGIPSYALAIIMLTILIKIILYPLNHAQM
KSMKVMQELQPKMQEIQKKYKNDPQKQQQALMELYKEYGVNPMSGCLPML
IQLPILIALYRALYNFKYLNPAHAKFFWIANISHKDPYFILPILAALTTY
IQSRMTMTSGNDPNQKVMLYVMPLMIGWIAMSLPAGLGIYWVVLNIMGII
QQYFVNQSTHKIVERGTKENAGD
>CHY_2289 preprotein translocase, SecY subunit
MLDALRNAMKAKELKSRLLFTLLMLLVFRIGAHIPVPGINLARMEELIQS
GTILGFFDVISGGAFKKFTIFAMSITPYINASIIMQLLTVVIPYLEKLAK
EGEEGRRKITEYVRYGTVILAFIQGFFMAIGLRSALNNPGILTYLYVALA
LTAGTAFLMWLGEQITEKGIGNGISLIIFAGIVSRIPGSIKTIIDYVSAG
TANILNVLILAVIAVAAIYAVVVVNEAQRRIPVQYAKRVVGRRVYGGQST
HLPIKVNQAGVIPIIFASSLLMFPITIAGWFPQNSFAQWVLKYFGWGTVI
NTILYALLIIGFTYFYTAIIMNPLDIAENLKKYGGFIPGIRPGRPTAEYI
DKVMSRVTFAGAVFLAFIAILPNIVMAIARIPNVTFGGTALLIVVGVALD
TMKQLESYLLMRHYQGFIK
>CHY_0325 clpP, ATP-dependent Clp protease, proteolytic subunit ClpP
MSYLVPIVIEQTSRGERSYDIWSRLLKDRTIFIGGPIDDHVANLVIAQML
FLEAEDPEKDIHLYINSPGGVITAGMAIYDTMQYIKPDVSTICIGQAASM
GAFLLAAGAKGKRFSLPYARIMIHQPLGGVQGQATDIDIHAREILRMRDM
LNELLTKHTGQPKEKIERDTERDFFMSAAEAKEYGIIDEVITVRK
>CHY_1434 ffh, signal recognition particle protein
MVFENLSNKLQEVFKKLKGKGRLTEEDVNLALREVRIALLEADVNFQVVK
DFIAKVKEKAVGHEVLESLTPGQQVIKIVHEELINLMGKTNAKLNDAGSP
PTIIMLVGLQGAGKTTTAAKLAYLLKKQGKKPLLVAADVYRPAAIKQLQV
LGDTIDVPVFTMGEQSPVDIAKASINFAKSNLKNYVIIDTAGRLHINEEL
MDELKKIKDVVHPHEILLVVDAMTGQDAVNVAKSFNDELGLTGVILTKLD
GDTKGGAALSVKAVTGCPIKFAGMGEKIENLEPFYPDRMASRILGMGDVL
TLIEKAKEALDAEKAQKMQEKLKSREFDLEDFLDSMQQIKKMGPLEQLLG
MIPGMGKVKDIAGMVDEKELKHIEAIIYSMTPEERRKPEIIDGSRKKRIA
KGSGTSIQEVNRLLKQFEQMKKLMKQFGGMEKQLKKGKKIKFPFFS
>CHY_0969 flgM, negative regulator of flagellin synthesis FlgM
MRINGVDFKNVVELYTKAVPSAARNEKSKTDEVVLTESGQEILKLRKKLA
EIPEVREELVSKIKGRILSGEYQIDLEKLAAKLKEWGEF
>CHY_1009 flhA, flagellar biosynthesis protein FlhA
MATVSKGNAFLKNNYDLIVAGFVILTLVLIIIPLPPFMLDILLVFSITFS
LVILLITLFTTEPLQFSIFPTLLLVMTLYRLALNISSTRLILSQASAGQV
IQAFGSFVVGGSYVVGFVVFLIITVIQFVVITNGAGRVAEVAARFTLDAM
PGKQMAIDAEFNAGLITEQEARQKRRKLQREADFFGAMDGASKFVRGDAI
AGIVILLINILGGLIIGVIQMKMPVLQALQTYTVLTIGDGLVSQIPALLI
STATGILVTRASADENFGREFTKQVGAFPKVLIMAAIIIFLLGLIPAMPN
LLFISLAGLLGYGGYLAVRYTGQVKDKAQPVIEVPKKREPENVLNYFNID
PLEIEIGYNLITLTDETQGGDLLGRLAAVRRQLALELGLYVRPIRIRDNL
QLPPNQYVFKLRGAEAEKGELLPGYVLVLDPTGEKTPEQGIPTKEPAFGL
EAWWVRESQKANLEMEGFTVIEPSAVLVTHLTEFIKKNAAEILGRQEVKE
LLETLKQNQPAVVEEVYPELLTLGEIQKVLQSLLKENVSIRDLTSILEAL
ADAVRQNRDPDFLIEQVRQKIRRQIVRQYLHEGKLYAVTLTPQWEQQIAE
SLQPTSLGIYPLLDTARTEQFIEKVKQTLTEVTRRGLYPIIITSSRVRLP
LRRLLDRFYPQAILLGINEIPPDVEVEILGTVN
>CHY_1008 flhB, flagellar biosynthetic protein FlhB
MADEQRDQRTEAPTPRRLAEARRRGQVFKSQELNFAVMFLIFFLLLLVLG
GYFYQQFYLLSRNVFRNMFIELTPSAVRGLLLYYFGWSFKIVLPFLLLGM
LAGIALNLVQVGFIFTTEPLKPSWERINPLSGFSRIFSRRNWVELLKNFL
KFGFLALVIYLRIKSNLPLIFQKIGQAPAEYFNGYFSLIKKIALDTLLVL
FLFGAVDYWYQRREYYQSLKMTKQELKEEYRQTEGDPLIKARLRERQRQI
ALNQIAREVPQATVVVTNPVHIAVALKYERGKMAAPKVVAKGAGFLAEKI
KEIARAHNVEIVENVEVARFLYKNCEVGEEIPEELYNAVAEIIAWVYRKK
RKR
>CHY_0992 fliE, flagellar hook-basal body complex protein FliE
MEITGISFPNIILLNNSAQSTKTLDFEKKLAEALDKVNEKQLKAEQATQD
FLAGKVDDIHQVLILAQEAKLSLELAVEVRNKIVEAYQEISRMQI
>CHY_0993 fliF, flagellar M-ring protein FliF
MDFQSLLASIKERFQNLSSFQKRAYGILILTAVLSLLLGYIFLGRPSYTP
LATGLDAKEAGAIAEKLKEWKINYKLGDEGTTILVPKSQVYEARIKLASA
GVLETNSGIGFELFDQTKLGASDFENQVNYQRALQEELRRTIVQLDAVED
ARVHLVLPEKSVFISEEKPATASILLKLKPLKKLTPQEIKGIIYLVANSV
EGLKPENVQVVDTYGNVLSDQVDLSSSLSAQSGRQQEMKKQFETELTNRI
NNLLTTILGPGKAVVSINADLDFNQEETTSQIALPGPLVSEQGSKEVVYG
SPGASGTVGTGPNTNQNYPYINGSTNGEVQVKEDFTRNYQVGQTVYKLVK
APGTVKRLSAAIAIDSGVPAADVNKIRDIVAAAMGYDQNRGDQIIINTIT
FDKTLAKQMEEQQAQAQKEQQARQALYKWLAIGAGALVFLSIIVFFGIRR
FRKKPAAVADISPRAPVGVSELEAAAAAERGPGIIVREMTAEPIVIQKVQ
SDIEKIKSLVDKNPDEVAMVLRAWLTDE
>CHY_0996 fliI, flagellum-specific ATP synthase
MSRVNLGYLTEQIKEHEFLKPWGVVRQVIGLTVEAHGLKVSVGETVEILA
GNARVLAEVVGFKEENAILMPLGEINGISLGSLVRPLRRQLQITVGKSLL
GKVLDGLGRPLNADKIYGRHFSLDRKPPKPLHRRRIKKPFATGIKAIDGP
LTCGEGQRLGIFAGSGVGKSTLLGMIARYAEADVNVIALIGERGREVLDF
IENDLGEGIKKSVLVVATSEQPALFRVKGAFVATAIAEYFREQGKKVLLM
MDSLTRFAMAQREIGLAAGEPPSSRGYTPSVFALLPKLVERAGNDDKGSI
TAFYTVLVEGDDFNEPIADAVRGLLDGHIVLSRQLAGKGHYPAIDLLASN
SRLMPELVDEQHLALTLKMREILDIYRQNEDLILIGAYKPGTNPLLDRAI
QLVPKINQFLQQKQNEKVDFTTTKEMLKTLFVEE
>CHY_1006 fliQ, flagellar biosynthetic protein FliQ
MASLYFIHLAQKSFTVLSLLVGPPLIVSLVVGLIVGILQAATQIQEQTLT
FVPKLIAVFLTLLLLSGWMLNIMVDFTGQIFQEMAKVRF
>CHY_1007 fliR, flagellar biosynthetic protein FliR
MTQWLIFLIIAARLAGFFGISPLIIPVRGVPPAVKGFFTLIVAYLLLPTV
AGSFTATDVQRNFFLLLIGESLIGLLLGFVTLIFANLYLVAGQYMDLTSG
LSAATLFDPLTQTNAGLMANFIYLYGILNYFLANGHHRLLTFLTVSFELI
PPGKGLLHPGLSELLIKIFALVMLVAIEIAIPFLMVMLISDLALGILART
APQMNVFLLSFGLKILLAIFTLWLLLPGIAYFTGIYLELMEKNLLAIIRG
IGYGR
>CHY_0986 fliS, flagellar protein FliS
MNNPYAQYQTQNIATAPPEKLLIMLYDGAIKFLKQGLKALDEKKYDDFSY
YISRTQDIISELMVTLDMDYEISKNLYQLYDYFMYRLIHGNVKKDRQSIE
EVQKHLEELRETWVQAAAAKEKATI
>CHY_1442 ftsY, signal recognition particle-docking protein FtsY
MGFFDRLKESLIKTKQNIVAKIEDVFKKSTVDEELFEKLEEILIEGDVGV
KPSLELVEKLRKTARERRITDSEQLKQVLKEEILKILEAGDNKLKNVPRT
PLVILVVGVNGVGKTTTIGKLAYYFKQQGKQVLLAAGDTFRAAAIEQLEI
WGNKVGCPVIKQKEGSDPAAVAFDAVKAAIARKIDVLIIDTAGRLHTKTN
LMEELRKVKRVIERELPGAPDEVLLVLDATTGQNALSQVEYFNKALDLTG
LVLTKLDGTAKGGVIIGIKSSYQIPIKFIGVGEKMDDLRPFDPQEFVEAL
FSS
>CHY_0633 gspG, general secretion pathway protein G
MKIRQALKNQKGFTLVELMVVVIIIGILAAIALPNFYKQADKAKVGRAKS
ELAQMRSILITYKSEYNKLPDDFTALLKDNGFSNGIPNDPWGNPYDYQAG
NPSTGPNANFLVYSKGADGQPSTGDEVYADVNGVDQGKKP
>CHY_1360 lepB, signal peptidase I
MFSETEKETTKSFSWKNEIKEFISAAIWAVILAFIIKTFIFQLTYVPTGS
MIPTILPNDRVVVLKFWYKIKPIERGQIVVFDPPNSANSPPFIKRVIGLP
GETLEIKNNTVYINGKPLKENYLPAKMEMEPFGPFKIPKDAIFVMGDNRQ
HSADSRYFGAVPIKNIKGRAVLTYWPLNRVKVLR
>CHY_1506 lspA, signal peptidase II
MVYFLLLSFGFFLLDQLSKYFIIKNFALGQSVKILSFFSITHVKNPGAAF
SILPNQRGIFILITIFVLSGILIYLVTTGNRNRFLLTSLALIFGGALGNF
YDRLTQGQVTDFLDFHFWPVFNLADSFITIGLLLFTYQFLLKKE
>CHY_0635 pilA, type IV pilin
MVFKNIFPVTEKGFTLIELIVVITIAGIIFLTAAISLDYTLAKITLANDA
YALAQNLRQTKELASAQEKAFTLYFFQENNSYLISENYKANKLYVLSPRL
KFIAVPLDPVTIDYKGSSRAFSVEMANSYGVKVRVYTTPRTDRIWITPFY
>CHY_0630 pilB, type IV pilus assembly protein PilB
MSEAKDGKKTKRLGDFLVENGLITEEQLQKALEYQKRTGERLGQALIKLG
YVSEQDIMGVLEFQLGIPQVALYNYSLDPALIKSIPESLIKRHKVIPLKR
EGNRLTVAMVDPLNVVAIDDLRLATNLDIIPVIASEKEIDAVINRFFGAI
DLNETIKDIEKAGEEPEVIKNEETEEVLVDEAPVVRLVNSLLLQAVNQRA
SDVHIEPFEDMVRVRFRVDGFLREVMTLPRAIRSSLTSRIKIMANMNITE
KRLPQDGRIKIKVANRQVDMRVATTPTLFGEKVVIRLLDQENAFLTLDRL
GLSSKNSERFNKILAQPHGMILIAGPTGSGKTTTLYAALNQIHDPSKNII
TIEDPVEYVMPGVTQIQVNPKVGLTFAVGLRSILRLDPDIIMVGEIRDRE
TAEIAVKAANTGHLVLSTIHTNDAVSTVSRLVEMGIEAYLVAASLVGIVA
QRLVRKLCPECKASTKIGPDDPAYHALNLGQGETVTVYRPVGCPACENTG
YKGRVGIHEVLINSRKVRNLIVNGGSYDEMLATVREEGMVLMLEDGREKV
LAGITAPEEIIRVASTVN
>CHY_0632 pilC, type IV pilus assembly protein PilC
MPQYRYKAKDLSGRVVSGLVEAESEVGARNLLREKRFFVLELKKSDGAVN
SGFSFSFQRKLKAKDLALMAKQLGTMIAAGVPLLTAVNVLSRQVENKTLK
KSLIRIEEKLRNGNTLSESLREEKIFPELMCSMVEVGEVGGVLDNVLDRL
SLHYEKEAQLSEKIRSAMTYPMVVLFAAIAAVLVLVTYVLPQFTGILLQA
NIELPLITQVVIKITNFFSQHAATIFLTLGAIIGGLLYWFSTPPGRKIRD
QLSLNMPLIGTLVLKGIIARFSRTMATLVQGGVPMLQSLRVVQKTLGNGE
MQKVLELAEDKVREGESLATFLAQSRWFPPLLTQMMLVGEETGQLDAMLT
KAADFYEAEVDAAVGRLSSIIEPVLILFMGGIVGLIIVSIMLPMFNMVNA
VK
>CHY_0634 pilD, type IV prepilin peptidase
MEVLIIFLFGLIIGSFLNVVIYRLPRGQSILYPPSTCPNCGQRLKPWHLI
PVLSFLLQKGRCAYCGGKISFKYPLVELITAFIFSVVHLKFGLSLLTLKY
LLFFIFLIPLFFLDLENFLLPDKLTYPLFLAGVLINLITRELSWKSLIFG
VITGFGLLFLLALISRGGMGGGDIKLAAGLGAFLGFPLILETLFLAFFFG
GLTGIILLLTKKKARGDMVPFGPFLIGAAFITVLWGEKIIKWYLKIFFL
>CHY_0639 pilM, type IV pilus assembly protein PilM
MGKNRYILAFDAGVRYFKAVLLKADKKQPELLKTVTYQMPVEFQENTVRD
YIPKYLLAAKKEFNIGKAKVITTLPGNKIISRIIKVPLMNQKELNAYLDL
EAEQYLPVPVKDSVLASVILENAEADDGTKQMNVLLSAASREIIMDLYDT
VVSTGLNLDVIDLPFLALYRGVFSQINPEVPVAVVDIGAGNTLLIIVKDG
ILKFVRSIKWGANAITQMIATNMNLDFVKAEQLKEEKGELLAADEQVVDQ
EKLTIDISIRQAISELINEIRRSIDFYRTQERGNNVERILITGGGSKLKG
LTELFESQLDLETFTFAPMVEEKLDPAFTLAYGLGLWGVERDV
>CHY_0640 pilN, type IV pilus assembly protein PilN
MYKANLLPPELQKDVEINTKKLAILAGITALVTIIIFSLIGFMVRVYYLK
KDLEVKKANIVQLQKIAQKVNETKNEISLLNKEKEAFLELKQKRLVFTVI
LTDINLNIPKNTWLTEIKYNPATRELSLTGSTRDSEEAGIFVYNLNNLPH
FSKVLLVQMIRNNTGNYDFSIKAILK
>CHY_0631 pilT, type IV pilus retraction protein PilT
MINELLRLMVEFKASDLHLTVNFPPAYRIHGNIRPLTELARENPGIPQSL
TRLLTMSDTETMARTIMSTEQWEKFAKMGELDFAYSLPDVGRFRVNVFRQ
RGAVALVLRHINSKILSFKELGLPEVIADLSRKNRGIVLVTGPTGSGKST
TLASMIDLINSERACHIITLEDPIEYLHTHKKSVVNQREIGSDTESFAKA
LRAAMREDPDVILVGEMRDLETISIAITAAETGHLVFATLHTSSAAETID
RIIDVFPPSQQQQIRVQLSTTIQGIIAQQLIPRMDGKGRVVAVEVMVATP
AIRNLIREGKTHQIPAQIQTGAKYGMQTLDMALAKLYQNRLISYEEAISR
AHDPESLARMLY
>CHY_0162 secA, preprotein translocase, SecA subunit
MLKFLKNLLDDNAREIKRLTARVEEINSLEPQMQKLSDEELRAKTGEFKE
RIARGESLDELLPEAFAVVREASRRVLGMRHFDVQLMGGIVLHEGKIAEM
KTGEGKTLVATLPAYLNALTGRGVHIVTVNDYLARRDAEWMGKIYKFLGL
SVGLVVHGMDYAEKKAAYLADITYGTNNEFGFDYLRDNMAIHPDQVVQRE
LYYAIIDEVDSILIDEARTPLIISGEAEKSTDLYYTFAKIVKQLVPGEDY
TVDEKAHAVMPTEAGIHKVEKMLGIQNLYADEHMELTHHLNAALKAQALM
KRDRDYVVKDGQVIIVDEFTGRLMFGRRYSDGLHQAIEAKEGVKIEQETQ
TLATITFQNYFRMYEKLAGMTGTAETEENEFRKIYNLSVVVIPTHKPMIR
KDLPDVIFKTEKAKFKAIVEEVARRHQTGQPILIGTISIEKSEMLSEMLK
KRGIPHQVLNAKYHEKEAEIVAQAGRLGAVTIATNMAGRGTDILLGGNPE
FLALQELRKMGKTPEDDPELYRELLAKYKKITDEEHKKVVELGGLHIIGT
ERHESRRIDNQLRGRAGRQGDPGSSQFFISLEDDLMRLFGSDNIAGLMDR
LGLDEDTPIEHPLITRSIETAQKRVENRNFEIRKHVLEYDNVMNQQRELI
YSQRRRVLFGEDVLTFVHQMIEAVVERAVDTYCPDGVHPEEWDLKGLLEY
AHNVFLPNHQLTPEDLADTGKKALVEFLVEKAKEYYKKREEELGGEQLRE
LERYVILRVVDEKWMDHLDAMDQLREGIGLRAYGQKDPLVEYKIESVEMF
NNMIAAIQEDVVRYLMRLSVVRQPETRRVRRVVENRYQEEGPKKPYRREQ
KIGRNDPCPCGSGKKYKKCCGRNG
>CHY_1512 secD, protein-export membrane protein SecD
MRLGKFTLFSGVLILILILGWYTFLGFGAVKPLVKYTTLGLDLQGGVHVV
FQAKELPGSPVNDKTMQSTISIIETRVNELGISEPIIQKQGKDRIIVEIA
GYKNPEEAVRTLIKPAVLEFKSPEGEVIVSGKDLRDAIEAKDPNTGLAEV
DLTFNAEGAKKFADFTTKNVNRNLGIYLDGKLLQNPVIKEPITNGKARIT
GYKDLEEAHRIAVLLRSGALPLKLEILEKKVVGPTLGADSLRRSVRASII
GVIAIFVFMILYYRFPGFIADFALILYATIVLGVMIALKATLTLPGIAGF
VLSMGMAVDANILIFERLKEELRMGKTLRSAIDAGFKRAFLTVFDSNATT
LIAAVILYFLGTGPIRGFAVTLSIGIIASMFTAITFTRWLLFLAADSKVV
KNPKLYGA
>CHY_1511 secF, protein-export membrane protein SecF
MFHIIKNRKYWYIISLLIIVPGIISLFIQGLNWGIDFTGGTILEVKFSKN
VVSQDIRNVITQMGFKVSSIQLTGEGNYLIRTEELDTVKRDAVIKALEDK
LGKVEVLREDRIGSVVSRELLQKAFLALLIASVLMLLYITFRFEFYFGVA
AIIALLHDVFVTIGLFSIFQWEVDSSFVAAILTIIGYSINDTIVIFDRIR
ENLKKREKGEALDDLINKSLWQTMARSINTVLTVIFVLVSLLLFGGSSIK
VFVTAMLIGVTSGAYSSIFNASPIWFDLKRLSSKRKN
>CHY_0285 secG, preprotein translocase, SecG subunit
MAVLKGILVFLHILAALGVIAAVLLQSGKSAGLSGSIAGGAEILFGKKKG
LDELFEKMTVVAVILFMILSLVLALLF
>CHY_1514 yajC, preprotein translocase, YajC subunit
MSSKIFTPQVVTIIYLVVFFLIVYFFMIRPQNQRQKQHQEFLKSLKVDDK
VLTAGGLIGEVIKIKEKTVVLRLSDNVKVEILKSAITGPYKE