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2024-05-19 11:25:01

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Rhizobium etli CFN 42, CFN 42

Number of genes found: 57

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Rhizobium etli CFN 42, CFN 42
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA RHE_CH03558 hypothetical conserved proteinSubName: Full=Hypothetical conserved protein; chromosome CDS3748217 456 + 0.640351
NA RHE_CH01356 hypothetical conserved proteinSubName: Full=Hypothetical conserved protein; chromosome CDS1417944 1950 + 0.587179
NA RHE_CH01975 probable transport secretion system IV, VirD4 proteinSubName: Full=Probable transport secretion system IV, VirD4 protein; chromosome CDS2058897 1560 - 0.627564
NA RHE_CH00209 probable pilus assembly proteinSubName: Full=Probable pilus assembly protein; chromosome CDS222036 1008 + 0.590278
NA RHE_CH00200 hypothetical conserved proteinSubName: Full=Hypothetical conserved protein; chromosome CDS213385 636 - 0.592767
NA RHE_CH02927 probable Clp protease proteinSubName: Full=Probable Clp protease protein; chromosome CDS3058900 2085 - 0.606715
NA RHE_PF00424 hypothetical conserved proteinSubName: Full=Hypothetical conserved protein; p42f CDS478270 474 + 0.559072
NA RHE_CH01639 probable DNA processing chain A proteinSubName: Full=Probable DNA processing chain A protein; chromosome CDS1726075 1143 - 0.685039
NA RHE_CH02109 probable multiple antibiotic resistance transporter proteinSubName: Full=Probable multiple antibiotic resistance transporter protein; chromosome CDS2209461 648 - 0.662037
NA RHE_PF00425 hypothetical conserved proteinSubName: Full=Hypothetical conserved protein; p42f CDS478745 585 + 0.589744
NA RHE_CH00437 putative inner membrane transmembrane proteinRecName: Full=Membrane protein insertase YidC; AltName: Full=Foldase YidC; AltName: Full=Membrane integrase YidC; AltName: Full=Membrane protein YidC; chromosome CDS449672 1794 - 0.608696
NA RHE_CH01892 putative RTX toxin hemolysin-type calcium-binding proteinSubName: Full=Putative RTX toxin hemolysin-type calcium-binding protein; chromosome CDS1972383 2103 - 0.611507
NA RHE_CH00201 hypothetical conserved proteinSubName: Full=Hypothetical conserved protein; chromosome CDS214409 309 - 0.63754
NA RHE_CH00199 hypothetical conserved proteinSubName: Full=Hypothetical conserved protein; chromosome CDS212804 582 - 0.608247
NA RHE_CH02518 hypothetical conserved membrane proteinSubName: Full=Hypothetical conserved membrane protein; chromosome CDS2629053 1467 + 0.629857
NA RHE_CH02370 putative periplasmic component of the Tol biopolymer transport systemSubName: Full=Putative periplasmic component of the Tol biopolymer transport system; chromosome CDS2477192 828 - 0.612319
NA RHE_CH00210 probable pilus assembly proteinSubName: Full=Probable pilus assembly protein; chromosome CDS223059 987 + 0.632219
atvA RHE_CH03485 acid tolerance and virulence proteinSubName: Full=Acid tolerance and virulence protein; chromosome CDS3669164 1383 - 0.614606
clpP1 RHE_CH01414 endopeptidase Clp, subunit 1 proteinRecName: Full=ATP-dependent Clp protease proteolytic subunit 1; EC=3.4.21.92; AltName: Full=Endopeptidase Clp 1; chromosome CDS1483984 609 + 0.579639
clpP2 RHE_CH01587 endopeptidase Clp, subunit 2 proteinRecName: Full=ATP-dependent Clp protease proteolytic subunit 2; EC=3.4.21.92; AltName: Full=Endopeptidase Clp 2; chromosome CDS1669050 630 + 0.606349
clpP3 RHE_CH03069 endopeptidase Clp, subunit 3 proteinRecName: Full=ATP-dependent Clp protease proteolytic subunit 3; EC=3.4.21.92; AltName: Full=Endopeptidase Clp 3; chromosome CDS3210802 585 - 0.593162
cpaA RHE_CH00203 prepilin peptidase proteinSubName: Full=Prepilin peptidase protein; EC=3.4.23.43; chromosome CDS215529 513 + 0.575049
cpaB RHE_CH00204 pilus assembly proteinSubName: Full=Pilus assembly protein; chromosome CDS216152 816 + 0.626225
cpaC RHE_CH00205 pilus assembly secretion proteinSubName: Full=Pilus assembly secretion protein; chromosome CDS216980 1497 + 0.61857
cpaF RHE_CH00208 pilus assembly secretion ATP-binding proteinSubName: Full=Pilus assembly secretion ATP-binding protein; chromosome CDS220556 1476 + 0.626016
ffh RHE_CH03957 signal recognition particle GTP-binding proteinRecName: Full=Signal recognition particle protein; AltName: Full=Fifty-four homolog; chromosome CDS4184268 1578 + 0.650824
flhA RHE_CH00686 flagellar biosynthesis transmembrane proteinSubName: Full=Flagellar biosynthesis transmembrane protein; chromosome CDS704174 2088 + 0.6159
flhB RHE_CH00650 flagellar biosynthesis transmembrane proteinSubName: Full=Flagellar biosynthesis transmembrane protein; chromosome CDS671097 1122 - 0.602496
fliE RHE_CH00660 flagellar hook-basal body proteinRecName: Full=Flagellar hook-basal body complex protein FliE; chromosome CDS679850 342 + 0.625731
fliF RHE_CH00646 flagellar M-ring proteinRecName: Full=Flagellar M-ring protein; chromosome CDS666964 1692 + 0.624114
fliI RHE_CH00656 H(+)-transporting ATP synthase, flagellum-specific proteinSubName: Full=H(+)-transporting ATP synthase, flagellum-specific protein; EC=3.6.3.14; chromosome CDS676928 1398 + 0.658083
fliN RHE_CH00652 flagellar motor switch proteinSubName: Full=Flagellar motor switch protein; chromosome CDS673472 645 - 0.568992
fliP RHE_CH00667 flagellar biosynthesis transmembrane proteinSubName: Full=Flagellar biosynthesis transmembrane protein; chromosome CDS684381 738 + 0.593496
fliQ RHE_CH00685 flagellar biosynthesis transmembrane proteinSubName: Full=Flagellar biosynthesis transmembrane protein; chromosome CDS703773 267 + 0.588015
fliR RHE_CH00687 flagellar byosinthesis transmembrane proteinSubName: Full=Flagellar byosinthesis transmembrane protein; chromosome CDS706258 753 + 0.576361
ftsY RHE_CH03953 cell division proteinRecName: Full=Signal recognition particle receptor FtsY; Short=SRP receptor; chromosome CDS4179771 1569 - 0.623327
lepB RHE_CH01389 signal peptidase I proteinSubName: Full=Signal peptidase I protein; EC=3.4.21.89; chromosome CDS1463267 744 + 0.56586
lpsA RHE_CH00392 lipoprotein signal peptidase proteinRecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; chromosome CDS409010 504 - 0.603175
nodTch RHE_CH03413 nodulation protein (outer membrane efflux protein)SubName: Full=Nodulation protein (Outer membrane efflux protein); chromosome CDS3589184 1437 + 0.633264
pilA RHE_CH00202 component of type IV pilus, pilin subunit proteinSubName: Full=Component of type IV pilus, pilin subunit protein; chromosome CDS215130 276 + 0.568841
plyA1 RHE_CH02605 polysaccharidase proteinSubName: Full=Polysaccharidase protein; chromosome CDS2716921 1488 - 0.575269
plyA3 RHE_CH03230 polysaccharidase proteinSubName: Full=Polysaccharidase protein; chromosome CDS3393139 1620 - 0.564198
secA RHE_CH03770 protein-export translocase proteinRecName: Full=Protein translocase subunit SecA; chromosome CDS3995954 2715 + 0.607367
secB RHE_CH00006 protein-export translocase chaperone proteinRecName: Full=Protein-export protein SecB; chromosome CDS4154 483 - 0.594203
secD1 RHE_CH00631 protein-export translocase proteinSubName: Full=Protein-export translocase protein; chromosome CDS651050 2550 - 0.633725
secD2 RHE_CH01832 protein-export translocase proteinSubName: Full=Protein-export translocase protein; chromosome CDS1919326 2541 + 0.619835
secE RHE_CH01661 protein-export translocase proteinRecName: Full=Protein translocase subunit SecE; chromosome CDS1750576 201 + 0.567164
secY RHE_CH01695 protein-export translocase proteinRecName: Full=Protein translocase subunit SecY; chromosome CDS1778162 1341 + 0.598807
sohB RHE_CH00879 protease proteinSubName: Full=Protease protein; chromosome CDS919771 861 + 0.629501
sppA RHE_CH00400 proteinase IV proteinSubName: Full=Proteinase IV protein; chromosome CDS414054 951 - 0.607781
tatA RHE_CH01823 SEC-independent protein translocase proteinRecName: Full=Sec-independent protein translocase protein TatA; chromosome CDS1911548 192 + 0.53125
tatB RHE_CH01824 SEC-independent protein translocase proteinRecName: Full=Sec-independent protein translocase protein TatB; chromosome CDS1911790 621 + 0.653784
tatC RHE_CH01825 SEC-independent protein translocase proteinRecName: Full=Sec-independent protein translocase protein TatC; chromosome CDS1912455 780 + 0.596154
tolB RHE_CH03462 protein transporter proteinRecName: Full=Protein TolB; Flags: Precursor; chromosome CDS3648205 1311 - 0.6209
tolQ RHE_CH03466 protein transporter proteinSubName: Full=Protein transporter protein; chromosome CDS3651601 720 - 0.629167
tolR RHE_CH03465 protein transporter proteinSubName: Full=Protein transporter protein; chromosome CDS3651127 456 - 0.629386
yajC RHE_CH01831 preprotein tranlocase proteinSubName: Full=Preprotein tranlocase protein; chromosome CDS1918934 348 + 0.609195