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2024-05-19 18:45:42

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Thiobacillus denitrificans ATCC 25259, ATCC 25259

Number of genes found: 111

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Thiobacillus denitrificans ATCC 25259, ATCC 25259
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA Tbd_0546 type IV pilus assembly protein PilCSubName: Full=Type IV pilus assembly protein PilC; chromosome CDS570771 1206 - 0.671642
NA Tbd_2402 protein export chaperone SecBRecName: Full=Protein-export protein SecB; chromosome CDS2474912 459 + 0.603486
NA Tbd_1294 type II secretion system protein FSubName: Full=Type II secretion system protein F; chromosome CDS1365769 1170 + 0.682906
NA Tbd_1702 Sec-independent periplasmic protein translocaseRecName: Full=Sec-independent protein translocase protein TatC; chromosome CDS1793919 810 - 0.611111
NA Tbd_1329 probable cobalt-zinc-cadmium outer membrane resistance proteinSubName: Full=Probable cobalt-zinc-cadmium outer membrane resistance protein; Flags: Precursor; chromosome CDS1411877 1278 - 0.684664
NA Tbd_0131 SecA proteinRecName: Full=Protein translocase subunit SecA; chromosome CDS140111 2772 + 0.655483
NA Tbd_0712 MotA/TolQ/ExbB proton channel family proteinSubName: Full=MotA/TolQ/ExbB proton channel family protein; chromosome CDS750423 753 - 0.674635
NA Tbd_1677 peptidase S14, ClpPRecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; chromosome CDS1765288 639 - 0.605634
NA Tbd_1509 biopolymer transport exbD-related transmembrane proteinSubName: Full=Biopolymer transport exbD-related transmembrane protein; chromosome CDS1597817 417 - 0.657074
NA Tbd_2088 peptidase S26A, signal peptidase IRecName: Full=Signal peptidase I; EC=3.4.21.89; chromosome CDS2179897 810 - 0.611111
NA Tbd_1177 flagellar biosynthesis protein FlhASubName: Full=Flagellar biosynthesis protein FlhA; chromosome CDS1236460 2079 + 0.67773
NA Tbd_0425 SecY proteinRecName: Full=Protein translocase subunit SecY; chromosome CDS446492 1314 + 0.618721
NA Tbd_0523 hypothetical proteinSubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS551556 546 - 0.661172
NA Tbd_1687 putative type IV secretory pathway VirD4 componentsSubName: Full=Putative type IV secretory pathway VirD4 components; chromosome CDS1776147 2355 - 0.616136
NA Tbd_1141 preprotein translocase SecG subunitSubName: Full=Preprotein translocase SecG subunit; chromosome CDS1196418 345 + 0.631884
NA Tbd_0358 biopolymer transport protein, ExbD/TolR familySubName: Full=Biopolymer transport protein, ExbD/TolR family; chromosome CDS389505 408 + 0.627451
NA Tbd_1090 flagellar assembly protein FliHSubName: Full=Flagellar assembly protein FliH; chromosome CDS1151927 606 + 0.70132
NA Tbd_1604 flagellar protein FliJSubName: Full=Flagellar protein FliJ; chromosome CDS1689799 450 + 0.66
NA Tbd_1612 flagellar biosynthesis protein FliRRecName: Full=Flagellar biosynthetic protein fliR; chromosome CDS1694976 789 + 0.646388
NA Tbd_1864 pilus assembly proteinSubName: Full=Pilus assembly protein; Flags: Precursor; chromosome CDS1960399 519 - 0.601156
NA Tbd_2697 type I secretion outer membrane protein, TolCSubName: Full=Type I secretion outer membrane protein, TolC; Flags: Precursor; chromosome CDS2778336 1314 + 0.677321
NA Tbd_0392 SecE subunit of protein translocation complexRecName: Full=Protein translocase subunit SecE; chromosome CDS420849 348 + 0.594828
NA Tbd_0752 pilus assembly pathway ATPase PilBSubName: Full=Pilus assembly pathway ATPase PilB; chromosome CDS796193 1734 + 0.704152
NA Tbd_1432 type II secretion systen protein GSubName: Full=Type II secretion systen protein G; chromosome CDS1520568 630 + 0.64127
NA Tbd_1176 flagellar biosynthetic protein FlhBSubName: Full=Flagellar biosynthetic protein FlhB; chromosome CDS1235678 786 + 0.711196
NA Tbd_1603 flagellar biosynthesis/type III secretory pathway ATPase FliISubName: Full=Flagellar biosynthesis/type III secretory pathway ATPase FliI; EC=3.6.3.14; chromosome CDS1688374 1407 + 0.685856
NA Tbd_2200 pilus assembly protein PilASubName: Full=Pilus assembly protein PilA; Flags: Precursor; chromosome CDS2280878 336 - 0.553571
NA Tbd_1611 flagellar biosynthesis protein FliQSubName: Full=Flagellar biosynthesis protein FliQ; chromosome CDS1694540 270 + 0.662963
NA Tbd_1416 RND efflux system outer membrane lipoprotein NodTSubName: Full=RND efflux system outer membrane lipoprotein NodT; Flags: Precursor; chromosome CDS1503810 1410 - 0.711348
NA Tbd_2079 preprotein translocase protein SecDRecName: Full=Protein translocase subunit SecD; chromosome CDS2171886 1815 + 0.666667
NA Tbd_1639 Putative Anti-Sigma-28 factor, FlgMSubName: Full=Putative Anti-Sigma-28 factor, FlgM; chromosome CDS1723810 297 + 0.643098
NA Tbd_0012 SMF proteinSubName: Full=SMF protein; chromosome CDS11993 963 - 0.728972
NA Tbd_1858 peptidase A8, signal peptidase IIRecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; chromosome CDS1953426 474 + 0.649789
NA Tbd_2321 putative secretion proteinRecName: Full=Protein CyaE; Flags: Precursor; chromosome CDS2396006 1386 - 0.737374
NA Tbd_2208 biopolymer transport protein ExbD/TolRSubName: Full=Biopolymer transport protein ExbD/TolR; chromosome CDS2288149 411 - 0.659367
NA Tbd_2369 type IV pilus assembly protein PilCSubName: Full=Type IV pilus assembly protein PilC; chromosome CDS2442789 1224 - 0.617647
NA Tbd_2420 Pilus retraction protein PilTSubName: Full=Pilus retraction protein PilT; chromosome CDS2491150 1134 + 0.616402
NA Tbd_1335 heavy metal RND efflux outer membrane protein, CzcC familySubName: Full=Heavy metal RND efflux outer membrane protein, CzcC family; Flags: Precursor; chromosome CDS1419294 1290 - 0.68062
NA Tbd_0376 Cell division transporter substrate-binding protein FtsYRecName: Full=Signal recognition particle receptor FtsY; Short=SRP receptor; chromosome CDS404011 1131 - 0.664898
NA Tbd_1897 putative Outer membrane proteinSubName: Full=Putative Outer membrane protein; Flags: Precursor; chromosome CDS1994288 1362 - 0.661527
NA Tbd_1434 type II secretion system protein ESubName: Full=Type II secretion system protein E; chromosome CDS1522373 1677 + 0.691711
NA Tbd_1865 pilus assembly proteinSubName: Full=Pilus assembly protein; chromosome CDS1960927 405 - 0.607407
NA Tbd_1300 type II secretion system protein DSubName: Full=Type II secretion system protein D; Flags: Precursor; chromosome CDS1371056 2004 + 0.681138
NA Tbd_0912 biopolymer transport protein ExbD/TolRSubName: Full=Biopolymer transport protein ExbD/TolR; chromosome CDS968190 420 + 0.685714
NA Tbd_0205 type IV pilus assembly protein PilPSubName: Full=Type IV pilus assembly protein PilP; Flags: Precursor; chromosome CDS222752 501 + 0.632735
NA Tbd_1599 flagellar hook-basal body complex protein FliERecName: Full=Flagellar hook-basal body complex protein FliE; chromosome CDS1684512 345 - 0.637681
NA Tbd_1593 flagellar protein FliSSubName: Full=Flagellar protein FliS; chromosome CDS1680415 453 + 0.620309
NA Tbd_2116 conserved hypothetical proteinSubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS2204688 1263 - 0.674584
NA Tbd_0202 Type IV pilus assembly protein PilMSubName: Full=Type IV pilus assembly protein PilM; Flags: Precursor; chromosome CDS220481 1089 + 0.640037
NA Tbd_1439 type II secretion system protein DSubName: Full=Type II secretion system protein D; Flags: Precursor; chromosome CDS1526329 1971 + 0.677828
NA Tbd_1703 twin-arginine translocation protein TatBRecName: Full=Sec-independent protein translocase protein TatB; chromosome CDS1794725 450 - 0.653333
NA Tbd_0711 putative biopolymer transport proteinSubName: Full=Putative biopolymer transport protein; chromosome CDS750001 423 - 0.680851
NA Tbd_1602 flagellar assembly protein FliHSubName: Full=Flagellar assembly protein FliH; chromosome CDS1687734 630 + 0.668254
NA Tbd_1295 type II secretion system proteinSubName: Full=Type II secretion system protein; chromosome CDS1366935 1701 + 0.679012
NA Tbd_2206 probable tolB-related transport proteinRecName: Full=Protein TolB; Flags: Precursor; chromosome CDS2285905 1284 - 0.669003
NA Tbd_2370 type IV pilus assembly protein, PilBSubName: Full=Type IV pilus assembly protein, PilB; chromosome CDS2444025 1716 - 0.631119
NA Tbd_2629 serine protease SohBSubName: Full=Serine protease SohB; chromosome CDS2702008 1002 + 0.693613
NA Tbd_1918 conserved hypothetical proteinSubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS2012955 2487 - 0.6924
NA Tbd_1863 hypothetical proteinSubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS1959533 873 - 0.620848
NA Tbd_0285 ATPaseSubName: Full=ATPase; chromosome CDS302934 1026 + 0.670565
NA Tbd_0357 putative transport protein ExbB2SubName: Full=Putative transport protein ExbB2; Flags: Precursor; chromosome CDS387827 1668 + 0.668465
NA Tbd_1088 flagellar biosynthesis/type III secretory pathway lipoprotein FliFSubName: Full=Flagellar biosynthesis/type III secretory pathway lipoprotein FliF; Flags: Precursor; chromosome CDS1149689 1146 + 0.725131
NA Tbd_1091 flagella ATPase FliISubName: Full=Flagella ATPase FliI; EC=3.6.3.15; chromosome CDS1152766 1395 + 0.70466
NA Tbd_1704 twin-arginine translocation protein TatA/ERecName: Full=Sec-independent protein translocase protein TatA; chromosome CDS1795267 213 - 0.57277
NA Tbd_1441 type II secretion system protein GSubName: Full=Type II secretion system protein G; Flags: Precursor; chromosome CDS1528768 390 + 0.671795
NA Tbd_1433 type II secretion system protein FSubName: Full=Type II secretion system protein F; chromosome CDS1521198 1179 + 0.690416
NA Tbd_1301 type II secretion system proteinSubName: Full=Type II secretion system protein; chromosome CDS1373061 507 + 0.708087
NA Tbd_1560 proteaseSubName: Full=Protease; chromosome CDS1642916 942 - 0.658174
NA Tbd_2368 prepilin cysteine protease (C20) PilDRecName: Full=Type 4 prepilin-like proteins leader peptide-processing enzyme; EC=2.1.1.-; EC=3.4.23.43; chromosome CDS2441941 852 - 0.673709
NA Tbd_0549 putative Type II secretory pathway component PulDSubName: Full=Putative Type II secretory pathway component PulD; Flags: Precursor; chromosome CDS574855 1746 - 0.652348
NA Tbd_1640 putative flagella synthesis protein FlgNSubName: Full=Putative flagella synthesis protein FlgN; chromosome CDS1724093 477 + 0.672956
NA Tbd_1600 flagellar M-ring protein FliFRecName: Full=Flagellar M-ring protein; chromosome CDS1685101 1647 + 0.655131
NA Tbd_1541 type IV pilus assembly protein PilZSubName: Full=Type IV pilus assembly protein PilZ; chromosome CDS1626384 372 - 0.623656
NA Tbd_0355 filamentous haemagglutinin-related proteinSubName: Full=Filamentous haemagglutinin-related protein; chromosome CDS375083 10419 + 0.649583
NA Tbd_2825 preprotein translocase subunit YidCRecName: Full=Membrane protein insertase YidC; AltName: Full=Foldase YidC; AltName: Full=Membrane integrase YidC; AltName: Full=Membrane protein YidC; chromosome CDS2907551 1641 - 0.657526
NA Tbd_2124 multiple antibiotic resistance (MarC)-related proteinsSubName: Full=Multiple antibiotic resistance (MarC)-related proteins; chromosome CDS2212503 648 - 0.658951
NA Tbd_1302 type II secretion system proteinSubName: Full=Type II secretion system protein; Flags: Precursor; chromosome CDS1373561 375 + 0.653333
NA Tbd_1415 RND efflux system outer membrane lipoprotein NodTSubName: Full=RND efflux system outer membrane lipoprotein NodT; chromosome CDS1502245 1563 - 0.710813
NA Tbd_1246 Flagellar biosynthesis protein FlhASubName: Full=Flagellar biosynthesis protein FlhA; Flags: Precursor; chromosome CDS1307674 2079 + 0.671477
NA Tbd_2209 MotA/TolQ/ExbB proton channel familySubName: Full=MotA/TolQ/ExbB proton channel family; chromosome CDS2288565 696 - 0.653736
NA Tbd_0753 type II secretory pathway component PulFSubName: Full=Type II secretory pathway component PulF; chromosome CDS797926 1224 + 0.681373
NA Tbd_1658 Putative Anti-Sigma-28 factor, FlgMSubName: Full=Putative Anti-Sigma-28 factor, FlgM; chromosome CDS1743124 309 + 0.656958
NA Tbd_1793 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1893984 891 - 0.641975
NA Tbd_2419 Pilus retraction protein PilTSubName: Full=Pilus retraction protein PilT; chromosome CDS2490089 1044 + 0.625479
NA Tbd_1748 putative outer membrane proteinSubName: Full=Putative outer membrane protein; Flags: Precursor; chromosome CDS1838779 1188 - 0.69697
NA Tbd_0204 type IV pilus assembly membrane transmembrane proteinSubName: Full=Type IV pilus assembly membrane transmembrane protein; Flags: Precursor; chromosome CDS222138 618 + 0.614887
NA Tbd_0592 putative pilus assembly protein PilF, TPR repeatSubName: Full=Putative pilus assembly protein PilF, TPR repeat; chromosome CDS620811 786 + 0.676845
NA Tbd_0764 general secretion pathway protein DSubName: Full=General secretion pathway protein D; Flags: Precursor; chromosome CDS807379 1665 + 0.671471
NA Tbd_0756 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS800328 543 + 0.674033
NA Tbd_1095 flagellar transport protein FliPSubName: Full=Flagellar transport protein FliP; Flags: Precursor; chromosome CDS1155392 726 + 0.674931
NA Tbd_1442 conserved hypothetical proteinSubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS1529144 570 + 0.714035
NA Tbd_0203 type IV pilus assembly protein PilNSubName: Full=Type IV pilus assembly protein PilN; Flags: Precursor; chromosome CDS221566 576 + 0.626736
NA Tbd_2080 preprotein translocase protein SecFRecName: Full=Protein-export membrane protein SecF; Flags: Precursor; chromosome CDS2173711 933 + 0.628081
NA Tbd_2373 Signal recognition particle proteinRecName: Full=Signal recognition particle protein; AltName: Full=Fifty-four homolog; chromosome CDS2448001 1344 + 0.647321
NA Tbd_1610 flagellar transport protein FliPSubName: Full=Flagellar transport protein FliP; Flags: Precursor; chromosome CDS1693769 762 + 0.637795
NA Tbd_1245 Flagellar biosynthetic protein FlhBSubName: Full=Flagellar biosynthetic protein FlhB; Flags: Precursor; chromosome CDS1306505 1173 + 0.673487
NA Tbd_1510 probable exbB-like biopolymer transportSubName: Full=Probable exbB-like biopolymer transport; chromosome CDS1598241 606 - 0.645214
NA Tbd_2078 preprotein translocase protein YajCSubName: Full=Preprotein translocase protein YajC; chromosome CDS2171517 321 + 0.616822
NA Tbd_1356 RND efflux system outer membrane lipoprotein NodTSubName: Full=RND efflux system outer membrane lipoprotein NodT; chromosome CDS1436467 1506 - 0.711155
NA Tbd_1293 tyep II secretion system protein GSubName: Full=Tyep II secretion system protein G; chromosome CDS1365200 540 + 0.659259
NA Tbd_0206 type IV pilus assembly protein PilQSubName: Full=Type IV pilus assembly protein PilQ; Flags: Precursor; chromosome CDS223282 2238 + 0.634942
NA Tbd_0911 MotA/TolQ/ExbB proton channel familySubName: Full=MotA/TolQ/ExbB proton channel family; chromosome CDS967425 762 + 0.707349
NA Tbd_1821 putative type IV secretory pathway VirD4 componentSubName: Full=Putative type IV secretory pathway VirD4 component; chromosome CDS1922143 1698 - 0.616608
NA Tbd_1608 flagellar motor switch/type III secretory pathway protein FliNSubName: Full=Flagellar motor switch/type III secretory pathway protein FliN; Flags: Precursor; chromosome CDS1692950 399 + 0.654135
NA Tbd_1096 flagellar biosynthetic protein FliQSubName: Full=Flagellar biosynthetic protein FliQ; chromosome CDS1156117 255 + 0.67451
NA Tbd_0547 ATPase, type IV pilus assembly protein PilBSubName: Full=ATPase, type IV pilus assembly protein PilB; chromosome CDS571979 1698 - 0.661366
NA Tbd_2071 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2163991 573 - 0.530541
NA Tbd_0354 hemolysin activation/secretion proteinSubName: Full=Hemolysin activation/secretion protein; Flags: Precursor; chromosome CDS373351 1668 + 0.66247
NA Tbd_0550 ATPase, Type II secretory pathway componentSubName: Full=ATPase, Type II secretory pathway component; Flags: Precursor; chromosome CDS576597 1314 - 0.693303
NA Tbd_0765 type II secretory pathway component ATPaseSubName: Full=Type II secretory pathway component ATPase; chromosome CDS809040 972 + 0.686214
NA Tbd_0759 Protein of unknown function DUF11SubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS802070 2724 + 0.695301