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2024-05-07 13:40:00

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Thiobacillus denitrificans ATCC 25259, ATCC 25259

Number of genes found: 111

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Thiobacillus denitrificans ATCC 25259, ATCC 25259
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Tbd_1095 flagellar transport protein FliPchromosome CDS1155392 726 + 0.674931
NA Tbd_1863 hypothetical proteinchromosome CDS1959533 873 - 0.620848
NA Tbd_0912 biopolymer transport protein ExbD/TolRchromosome CDS968190 420 + 0.685714
NA Tbd_2209 MotA/TolQ/ExbB proton channel familychromosome CDS2288565 696 - 0.653736
NA Tbd_1603 flagellar biosynthesis/type III secretory pathway ATPase FliIchromosome CDS1688374 1407 + 0.685856
NA Tbd_1245 Flagellar biosynthetic protein FlhBchromosome CDS1306505 1173 + 0.673487
NA Tbd_0203 type IV pilus assembly protein PilNchromosome CDS221566 576 + 0.626736
NA Tbd_1335 heavy metal RND efflux outer membrane protein, CzcC familychromosome CDS1419294 1290 - 0.68062
NA Tbd_1141 preprotein translocase SecG subunitchromosome CDS1196418 345 + 0.631884
NA Tbd_1433 type II secretion system protein Fchromosome CDS1521198 1179 + 0.690416
NA Tbd_0376 Cell division transporter substrate-binding protein FtsYchromosome CDS404011 1131 - 0.664898
NA Tbd_1599 flagellar hook-basal body complex protein FliEchromosome CDS1684512 345 - 0.637681
NA Tbd_2825 preprotein translocase subunit YidCchromosome CDS2907551 1641 - 0.657526
NA Tbd_0711 putative biopolymer transport proteinchromosome CDS750001 423 - 0.680851
NA Tbd_1293 tyep II secretion system protein Gchromosome CDS1365200 540 + 0.659259
NA Tbd_0756 hypothetical proteinchromosome CDS800328 543 + 0.674033
NA Tbd_1356 RND efflux system outer membrane lipoprotein NodTchromosome CDS1436467 1506 - 0.711155
NA Tbd_1295 type II secretion system proteinchromosome CDS1366935 1701 + 0.679012
NA Tbd_1677 peptidase S14, ClpPchromosome CDS1765288 639 - 0.605634
NA Tbd_1560 proteasechromosome CDS1642916 942 - 0.658174
NA Tbd_2206 probable tolB-related transport proteinchromosome CDS2285905 1284 - 0.669003
NA Tbd_1415 RND efflux system outer membrane lipoprotein NodTchromosome CDS1502245 1563 - 0.710813
NA Tbd_0712 MotA/TolQ/ExbB proton channel family proteinchromosome CDS750423 753 - 0.674635
NA Tbd_2078 preprotein translocase protein YajCchromosome CDS2171517 321 + 0.616822
NA Tbd_2088 peptidase S26A, signal peptidase Ichromosome CDS2179897 810 - 0.611111
NA Tbd_1864 pilus assembly proteinchromosome CDS1960399 519 - 0.601156
NA Tbd_0355 filamentous haemagglutinin-related proteinchromosome CDS375083 10419 + 0.649583
NA Tbd_1176 flagellar biosynthetic protein FlhBchromosome CDS1235678 786 + 0.711196
NA Tbd_1088 flagellar biosynthesis/type III secretory pathway lipoprotein FliFchromosome CDS1149689 1146 + 0.725131
NA Tbd_1821 putative type IV secretory pathway VirD4 componentchromosome CDS1922143 1698 - 0.616608
NA Tbd_2124 multiple antibiotic resistance (MarC)-related proteinschromosome CDS2212503 648 - 0.658951
NA Tbd_2419 Pilus retraction protein PilTchromosome CDS2490089 1044 + 0.625479
NA Tbd_1177 flagellar biosynthesis protein FlhAchromosome CDS1236460 2079 + 0.67773
NA Tbd_1748 putative outer membrane proteinchromosome CDS1838779 1188 - 0.69697
NA Tbd_2420 Pilus retraction protein PilTchromosome CDS2491150 1134 + 0.616402
NA Tbd_1329 probable cobalt-zinc-cadmium outer membrane resistance proteinchromosome CDS1411877 1278 - 0.684664
NA Tbd_1301 type II secretion system proteinchromosome CDS1373061 507 + 0.708087
NA Tbd_1858 peptidase A8, signal peptidase IIchromosome CDS1953426 474 + 0.649789
NA Tbd_1702 Sec-independent periplasmic protein translocasechromosome CDS1793919 810 - 0.611111
NA Tbd_1610 flagellar transport protein FliPchromosome CDS1693769 762 + 0.637795
NA Tbd_1640 putative flagella synthesis protein FlgNchromosome CDS1724093 477 + 0.672956
NA Tbd_2697 type I secretion outer membrane protein, TolCchromosome CDS2778336 1314 + 0.677321
NA Tbd_1918 conserved hypothetical proteinchromosome CDS2012955 2487 - 0.6924
NA Tbd_0759 Protein of unknown function DUF11chromosome CDS802070 2724 + 0.695301
NA Tbd_0753 type II secretory pathway component PulFchromosome CDS797926 1224 + 0.681373
NA Tbd_0206 type IV pilus assembly protein PilQchromosome CDS223282 2238 + 0.634942
NA Tbd_1612 flagellar biosynthesis protein FliRchromosome CDS1694976 789 + 0.646388
NA Tbd_1442 conserved hypothetical proteinchromosome CDS1529144 570 + 0.714035
NA Tbd_2079 preprotein translocase protein SecDchromosome CDS2171886 1815 + 0.666667
NA Tbd_1541 type IV pilus assembly protein PilZchromosome CDS1626384 372 - 0.623656
NA Tbd_1300 type II secretion system protein Dchromosome CDS1371056 2004 + 0.681138
NA Tbd_0392 SecE subunit of protein translocation complexchromosome CDS420849 348 + 0.594828
NA Tbd_0354 hemolysin activation/secretion proteinchromosome CDS373351 1668 + 0.66247
NA Tbd_0546 type IV pilus assembly protein PilCchromosome CDS570771 1206 - 0.671642
NA Tbd_1658 Putative Anti-Sigma-28 factor, FlgMchromosome CDS1743124 309 + 0.656958
NA Tbd_1687 putative type IV secretory pathway VirD4 componentschromosome CDS1776147 2355 - 0.616136
NA Tbd_1246 Flagellar biosynthesis protein FlhAchromosome CDS1307674 2079 + 0.671477
NA Tbd_1434 type II secretion system protein Echromosome CDS1522373 1677 + 0.691711
NA Tbd_2370 type IV pilus assembly protein, PilBchromosome CDS2444025 1716 - 0.631119
NA Tbd_2116 conserved hypothetical proteinchromosome CDS2204688 1263 - 0.674584
NA Tbd_0358 biopolymer transport protein, ExbD/TolR familychromosome CDS389505 408 + 0.627451
NA Tbd_0592 putative pilus assembly protein PilF, TPR repeatchromosome CDS620811 786 + 0.676845
NA Tbd_0752 pilus assembly pathway ATPase PilBchromosome CDS796193 1734 + 0.704152
NA Tbd_1639 Putative Anti-Sigma-28 factor, FlgMchromosome CDS1723810 297 + 0.643098
NA Tbd_0765 type II secretory pathway component ATPasechromosome CDS809040 972 + 0.686214
NA Tbd_0550 ATPase, Type II secretory pathway componentchromosome CDS576597 1314 - 0.693303
NA Tbd_2368 prepilin cysteine protease (C20) PilDchromosome CDS2441941 852 - 0.673709
NA Tbd_0131 SecA proteinchromosome CDS140111 2772 + 0.655483
NA Tbd_1432 type II secretion systen protein Gchromosome CDS1520568 630 + 0.64127
NA Tbd_1294 type II secretion system protein Fchromosome CDS1365769 1170 + 0.682906
NA Tbd_1793 conserved hypothetical proteinchromosome CDS1893984 891 - 0.641975
NA Tbd_1897 putative Outer membrane proteinchromosome CDS1994288 1362 - 0.661527
NA Tbd_1096 flagellar biosynthetic protein FliQchromosome CDS1156117 255 + 0.67451
NA Tbd_1608 flagellar motor switch/type III secretory pathway protein FliNchromosome CDS1692950 399 + 0.654135
NA Tbd_0523 hypothetical proteinchromosome CDS551556 546 - 0.661172
NA Tbd_2080 preprotein translocase protein SecFchromosome CDS2173711 933 + 0.628081
NA Tbd_1416 RND efflux system outer membrane lipoprotein NodTchromosome CDS1503810 1410 - 0.711348
NA Tbd_0547 ATPase, type IV pilus assembly protein PilBchromosome CDS571979 1698 - 0.661366
NA Tbd_2402 protein export chaperone SecBchromosome CDS2474912 459 + 0.603486
NA Tbd_2373 Signal recognition particle proteinchromosome CDS2448001 1344 + 0.647321
NA Tbd_1593 flagellar protein FliSchromosome CDS1680415 453 + 0.620309
NA Tbd_1091 flagella ATPase FliIchromosome CDS1152766 1395 + 0.70466
NA Tbd_1600 flagellar M-ring protein FliFchromosome CDS1685101 1647 + 0.655131
NA Tbd_1439 type II secretion system protein Dchromosome CDS1526329 1971 + 0.677828
NA Tbd_0357 putative transport protein ExbB2chromosome CDS387827 1668 + 0.668465
NA Tbd_1510 probable exbB-like biopolymer transportchromosome CDS1598241 606 - 0.645214
NA Tbd_0425 SecY proteinchromosome CDS446492 1314 + 0.618721
NA Tbd_1865 pilus assembly proteinchromosome CDS1960927 405 - 0.607407
NA Tbd_2208 biopolymer transport protein ExbD/TolRchromosome CDS2288149 411 - 0.659367
NA Tbd_1509 biopolymer transport exbD-related transmembrane proteinchromosome CDS1597817 417 - 0.657074
NA Tbd_2071 hypothetical proteinchromosome CDS2163991 573 - 0.530541
NA Tbd_0549 putative Type II secretory pathway component PulDchromosome CDS574855 1746 - 0.652348
NA Tbd_1611 flagellar biosynthesis protein FliQchromosome CDS1694540 270 + 0.662963
NA Tbd_2369 type IV pilus assembly protein PilCchromosome CDS2442789 1224 - 0.617647
NA Tbd_1703 twin-arginine translocation protein TatBchromosome CDS1794725 450 - 0.653333
NA Tbd_0202 Type IV pilus assembly protein PilMchromosome CDS220481 1089 + 0.640037
NA Tbd_1302 type II secretion system proteinchromosome CDS1373561 375 + 0.653333
NA Tbd_0012 SMF proteinchromosome CDS11993 963 - 0.728972
NA Tbd_2321 putative secretion proteinchromosome CDS2396006 1386 - 0.737374
NA Tbd_2629 serine protease SohBchromosome CDS2702008 1002 + 0.693613
NA Tbd_0911 MotA/TolQ/ExbB proton channel familychromosome CDS967425 762 + 0.707349
NA Tbd_1441 type II secretion system protein Gchromosome CDS1528768 390 + 0.671795
NA Tbd_1704 twin-arginine translocation protein TatA/Echromosome CDS1795267 213 - 0.57277
NA Tbd_0764 general secretion pathway protein Dchromosome CDS807379 1665 + 0.671471
NA Tbd_1602 flagellar assembly protein FliHchromosome CDS1687734 630 + 0.668254
NA Tbd_2200 pilus assembly protein PilAchromosome CDS2280878 336 - 0.553571
NA Tbd_1090 flagellar assembly protein FliHchromosome CDS1151927 606 + 0.70132
NA Tbd_0205 type IV pilus assembly protein PilPchromosome CDS222752 501 + 0.632735
NA Tbd_0285 ATPasechromosome CDS302934 1026 + 0.670565
NA Tbd_1604 flagellar protein FliJchromosome CDS1689799 450 + 0.66
NA Tbd_0204 type IV pilus assembly membrane transmembrane proteinchromosome CDS222138 618 + 0.614887