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2024-05-06 18:45:52

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Pseudomonas fluorescens PfO-1, PfO-1

Number of genes found: 139

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pseudomonas fluorescens PfO-1, PfO-1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Pfl_0993 Peptidase S26A, signal peptidase Ichromosome CDS1155251 855 + 0.60117
NA Pfl_4566 hypothetical proteinchromosome CDS5159702 1263 - 0.594616
NA Pfl_5556 Biopolymer transport protein ExbD/TolRchromosome CDS6223835 429 + 0.606061
NA Pfl_1990 conserved hypothetical proteinchromosome CDS2270343 510 + 0.641176
NA Pfl_0408 Pilus assembly protein, PilQchromosome CDS463929 525 + 0.611429
NA Pfl_3178 General secretion pathway protein Kchromosome CDS3659573 954 - 0.637317
NA Pfl_2499 Biopolymer transport protein ExbD/TolRchromosome CDS2858611 426 + 0.624413
NA Pfl_3043 pili assembly chaperonechromosome CDS3483713 750 + 0.578667
NA Pfl_0644 type II secretion system proteinchromosome CDS754818 891 - 0.640853
NA Pfl_4843 type IV pilus-associated protein, putativechromosome CDS5462277 3045 - 0.614121
NA Pfl_3023 conserved hypothetical proteinchromosome CDS3459347 2754 + 0.606391
NA Pfl_5337 Cell division transporter substrate-binding protein FtsYchromosome CDS5995949 1548 - 0.638889
NA Pfl_4844 type IV pilus assembly protein PilXchromosome CDS5465356 480 - 0.627083
NA Pfl_1278 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS1451545 1461 - 0.645448
NA Pfl_1552 Flagellar biosynthetic protein FlhBchromosome CDS1738329 1140 + 0.624561
NA Pfl_0412 conserved hypothetical proteinchromosome CDS468333 1602 + 0.642946
NA Pfl_2209 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS2494414 1419 - 0.649753
NA Pfl_1982 type II secretion system protein Echromosome CDS2263533 1722 + 0.628339
NA Pfl_0652 conserved hypothetical proteinchromosome CDS762821 1677 - 0.607036
NA Pfl_0639 Peptidase A24A, prepilin type IVchromosome CDS751180 471 + 0.615711
NA Pfl_3195 General secretion pathway protein Hchromosome CDS3672912 453 + 0.620309
NA Pfl_4821 type II secretion system proteinchromosome CDS5441417 1218 + 0.614943
NA Pfl_3044 Fimbrial biogenesis outer membrane usher proteinchromosome CDS3484548 2487 + 0.611178
NA Pfl_3739 Biopolymer transport protein ExbD/TolRchromosome CDS4225025 402 + 0.60199
NA Pfl_1895 Peptidoglycan-binding LysMchromosome CDS2164664 2652 + 0.634992
NA Pfl_1580 Heme exporter protein Dchromosome CDS1769014 177 + 0.627119
NA Pfl_4603 Type IV pilus biogenesis protein PilFchromosome CDS5204778 759 - 0.58498
NA Pfl_0381 Twin-arginine translocation protein TatBchromosome CDS436885 447 - 0.64877
NA Pfl_1216 SEC-C domain proteinchromosome CDS1389723 213 - 0.610329
NA Pfl_2139 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS2422163 1554 - 0.657658
NA Pfl_4851 Signal peptidase IIchromosome CDS5469594 513 - 0.592593
NA Pfl_5318 Pilus retraction protein PilTchromosome CDS5982168 1035 - 0.610628
NA Pfl_0610 Multiple antibiotic resistance (MarC)-like proteinschromosome CDS716093 597 - 0.59464
NA Pfl_4820 type II secretion system protein Echromosome CDS5439714 1701 + 0.601411
NA Pfl_0409 type II and III secretion system proteinchromosome CDS464468 2079 + 0.60558
NA Pfl_0645 type II secretion system proteinchromosome CDS755705 882 - 0.637188
NA Pfl_3042 Fimbrial proteinchromosome CDS3483053 588 + 0.585034
NA Pfl_0643 conserved hypothetical proteinchromosome CDS754117 690 - 0.65942
NA Pfl_2537 Autotransporter beta-domainchromosome CDS2903713 1071 - 0.622782
NA Pfl_0144 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS173582 1452 + 0.658402
NA Pfl_4428 SecA proteinchromosome CDS4985551 2805 - 0.595365
NA Pfl_1972 type II secretion system proteinchromosome CDS2248394 1188 - 0.626263
NA Pfl_1560 Flagellar biosynthesis protein FlhAchromosome CDS1748724 2130 + 0.614084
NA Pfl_3173 General secretion pathway protein Fchromosome CDS3652931 1212 - 0.64604
NA Pfl_4845 type IV pilus assembly protein PilWchromosome CDS5465846 714 - 0.619048
NA Pfl_3670 type 1 pili usher pathway chaperone CsuCchromosome CDS4154512 783 - 0.648787
NA Pfl_3037 Fimbrial proteinchromosome CDS3473891 1056 + 0.502841
NA Pfl_2497 surface antigen (D15)chromosome CDS2855190 1596 + 0.641604
NA Pfl_1547 Surface presentation of antigens (SPOA) proteinchromosome CDS1735595 459 + 0.616558
NA Pfl_1535 Flagellar hook-basal body complex protein FliEchromosome CDS1724044 330 + 0.533333
NA Pfl_2483 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS2838208 1461 - 0.633128
NA Pfl_4150 Type IV pilus assembly PilZchromosome CDS4688363 357 - 0.596639
NA Pfl_4620 YajCchromosome CDS5219155 336 - 0.583333
NA Pfl_2756 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS3179067 1410 - 0.629078
NA Pfl_1470 LysM domain proteinchromosome CDS1650620 1788 + 0.635347
NA Pfl_1989 conserved hypothetical proteinchromosome CDS2269964 375 + 0.621333
NA Pfl_0649 Flp pilus assembly CpaBchromosome CDS760342 939 - 0.676251
NA Pfl_1462 Type I secretion outer membrane protein, TolCchromosome CDS1634796 1359 - 0.623252
NA Pfl_0407 Pilus assembly protein, PilOchromosome CDS463309 624 + 0.594551
NA Pfl_5092 SecE subunit of protein translocation complexchromosome CDS5721819 369 - 0.512195
NA Pfl_3738 MotA/TolQ/ExbB proton channelchromosome CDS4224321 705 + 0.643972
NA Pfl_1530 Flagellar protein FliSchromosome CDS1718842 399 + 0.598997
NA Pfl_4848 general secretion pathway protein Hchromosome CDS5467603 555 + 0.601802
NA Pfl_3174 type II secretion system protein Echromosome CDS3654142 1407 - 0.658138
NA Pfl_5743 60 kDa inner membrane insertion proteinchromosome CDS6435926 1683 - 0.563874
NA Pfl_0938 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS1089593 1500 + 0.644667
NA Pfl_4405 MotA/TolQ/ExbB proton channelchromosome CDS4965433 666 - 0.611111
NA Pfl_4842 conserved hypothetical proteinchromosome CDS5461860 402 - 0.559702
NA Pfl_1988 conserved hypothetical proteinchromosome CDS2269485 474 + 0.639241
NA Pfl_0382 Twin-arginine translocation protein TatA/Echromosome CDS437342 279 - 0.591398
NA Pfl_0019 SMF proteinchromosome CDS21282 1101 + 0.653043
NA Pfl_0406 Fimbrial assemblychromosome CDS462746 567 + 0.61552
NA Pfl_0220 Biopolymer transport protein ExbD/TolRchromosome CDS262353 402 + 0.587065
NA Pfl_2498 MotA/TolQ/ExbB proton channelchromosome CDS2856800 1800 + 0.643889
NA Pfl_4177 MotA/TolQ/ExbB proton channelchromosome CDS4713606 636 - 0.622642
NA Pfl_1463 VCBSchromosome CDS1636680 8664 + 0.633887
NA Pfl_0491 Type I secretion outer membrane protein, TolCchromosome CDS568234 1434 - 0.634589
NA Pfl_1973 General secretion pathway protein Gchromosome CDS2249596 429 - 0.620047
NA Pfl_1539 ATPase FliI/YscNchromosome CDS1727989 1359 + 0.64312
NA Pfl_0336 protein export chaperone SecBchromosome CDS380911 486 + 0.596708
NA Pfl_0380 Sec-independent periplasmic protein translocasechromosome CDS435834 795 - 0.608805
NA Pfl_4255 Anti-Sigma-28 factor, FlgMchromosome CDS4801835 327 + 0.571865
NA Pfl_3171 Filamentous haemagglutinin-likechromosome CDS3638770 12513 - 0.642372
NA Pfl_4822 Prepilin peptidasechromosome CDS5442636 873 + 0.613975
NA Pfl_0174 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS208716 1443 + 0.677755
NA Pfl_3196 conserved hypothetical proteinchromosome CDS3673361 609 + 0.633826
NA Pfl_5059 SecY proteinchromosome CDS5695085 1329 - 0.550038
NA Pfl_4163 Peptidase S49, SppAchromosome CDS4698470 990 - 0.577778
NA Pfl_3623 Outer membrane efflux proteinchromosome CDS4096433 1248 - 0.654647
NA Pfl_1540 Flagellar FliJ proteinchromosome CDS1729354 450 + 0.613333
NA Pfl_0650 Flp/Fap pilin componentchromosome CDS761573 246 + 0.544715
NA Pfl_0134 Type I secretion outer membrane protein, TolCchromosome CDS161000 1353 + 0.603104
NA Pfl_0708 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS839060 1452 + 0.61157
NA Pfl_0646 type II secretion system protein Echromosome CDS756597 1272 - 0.639937
NA Pfl_4819 general secretion pathway protein Hchromosome CDS5439071 417 - 0.565947
NA Pfl_3697 Peptidase S14, ClpPchromosome CDS4185768 636 - 0.561321
NA Pfl_1549 Flagellar transport protein FliPchromosome CDS1736512 759 + 0.612648
NA Pfl_1550 Flagellar biosynthesis protein FliQchromosome CDS1737267 270 + 0.581481
NA Pfl_3791 Filamentous haemagglutinin-likechromosome CDS4287959 4470 - 0.638255
NA Pfl_1536 Flagellar FliF M-ring proteinchromosome CDS1724389 1788 + 0.62528
NA Pfl_1018 Signal recognition particle proteinchromosome CDS1182821 1377 + 0.597676
NA Pfl_0160 Glycosyl hydrolase, BNR repeatchromosome CDS192277 6471 + 0.63066
NA Pfl_5555 MotA/TolQ/ExbB proton channelchromosome CDS6222875 954 + 0.65304
NA Pfl_1538 Flagellar assembly protein FliHchromosome CDS1727193 807 + 0.629492
NA Pfl_4619 SecD export membrane proteinchromosome CDS5217219 1872 - 0.595085
NA Pfl_4847 conserved hypothetical proteinchromosome CDS5467002 474 - 0.616034
NA Pfl_0776 Preprotein translocase SecG subunitchromosome CDS910921 384 + 0.507812
NA Pfl_3176 General secretion pathway M proteinchromosome CDS3657893 546 - 0.652015
NA Pfl_4176 Biopolymer transport protein ExbD/TolRchromosome CDS4713181 429 - 0.589744
NA Pfl_4402 TolB-likechromosome CDS4962580 1245 - 0.593574
NA Pfl_3175 type II and III secretion system proteinchromosome CDS3655545 2352 - 0.642857
NA Pfl_2682 Type I secretion outer membrane protein, TolCchromosome CDS3083608 1356 + 0.609145
NA Pfl_2394 heavy metal RND efflux outer membrane protein, CzcC familychromosome CDS2753724 1257 + 0.641209
NA Pfl_3792 Hemolysin activator HlyBchromosome CDS4292523 1728 - 0.635995
NA Pfl_3114 Peptidase S49chromosome CDS3572958 1023 - 0.59824
NA Pfl_2524 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS2885554 1470 + 0.619728
NA Pfl_3669 Fimbrial biogenesis outer membrane usher proteinchromosome CDS4152073 2427 - 0.626288
NA Pfl_5424 type II secretion system protein Echromosome CDS6089033 1785 + 0.638095
NA Pfl_2657 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS3047019 1422 - 0.632208
NA Pfl_4256 FlgNchromosome CDS4802210 468 + 0.583333
NA Pfl_4618 SecF proteinchromosome CDS5216295 915 - 0.587978
NA Pfl_1551 Flagellar biosynthesis protein FliRchromosome CDS1737540 786 + 0.622137
NA Pfl_0219 MotA/TolQ/ExbB proton channelchromosome CDS261626 726 + 0.629477
NA Pfl_3082 Pilus retraction protein PilTchromosome CDS3530653 1113 - 0.565139
NA Pfl_3179 General secretion pathway protein Gchromosome CDS3660535 459 - 0.631808
NA Pfl_2958 Heme exporter protein Dchromosome CDS3396387 177 - 0.610169
NA Pfl_3644 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS4121141 1470 - 0.642177
NA Pfl_2897 Outer membrane autotransporter barrelchromosome CDS3338552 2244 - 0.544563
NA Pfl_1193 virulence proteinchromosome CDS1361492 1296 - 0.652778
NA Pfl_0161 Outer membrane efflux proteinchromosome CDS198796 1515 + 0.635644
NA Pfl_4404 Biopolymer transport protein ExbD/TolRchromosome CDS4964957 462 - 0.590909
NA Pfl_0405 Type IV pilus assembly protein PilMchromosome CDS461682 1065 + 0.646948
NA Pfl_1855 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS2112375 1395 - 0.65448
NA Pfl_1987 type II and III secretion system proteinchromosome CDS2267635 1848 + 0.620671
NA Pfl_0648 type II and III secretion system proteinchromosome CDS759052 1269 - 0.635934
NA Pfl_3180 General secretion pathway protein Ichromosome CDS3661140 381 + 0.624672
NA Pfl_0647 pilus assembly protein CpaEchromosome CDS757865 1191 - 0.649034
NA Pfl_1482 conserved hypothetical proteinchromosome CDS1663335 450 - 0.604444
NA Pfl_3498 hypothetical proteinchromosome CDS3978739 750 + 0.469333