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# Shigella sonnei Ss046, Ss046

>SSO_1019 putative membrane protein
MSKFTVDSFIVELSFSENVIKGLQRVEKAALQSAQRIERNLNRAFKVDTK
QLDSNLTSSLGQLERKFNKTFDKIEQRARSTKAFQFATRFNDTVNPPKQS
RQPRISGNRAITAAHSVNMSKLGDINPLMAKMFKAQYYSLSGKAGNIGSE
KFNAELAKLNQSLRETLNKLRSQTKTASINNTSDAFNNLASNAIKLSGAF
YSVMGALNAYKAIMNAGLKRDSAQRAAKFVLGDKASEAEVFIRNLADKTG
LNISEGLSSYAKFAAGAQGSMSQEQTQELFGNATAMSRLMGLSNDELNGI
LRAFEQMASKGKIQAEELRGQLGDRMAGAFKLFAEALGMTATELDAAMKN
GKVLSADTLPKVAKQMGLMIDKAGGWAEVTKSTQTALGKLANNWDDTMVK
IFSGSQDELNGFLSSLSNLLSEMGMSSSIAGDAIGGLIDMLKAGVDDIRV
FNNTIEGWILQTKKFYYSLDDTKRKLLDEVGDGFINFVKGLAIALSAKTL
FSATTGVMNLTRAITTLGTRANQVAGQVATGKGGGKLKGVAGGVGSALAI
GYADDGYETALALASMIPQIRGVTLGLYALKKALDFMNQEVVKNANMHPS
GVGVGSDFNPVYSGDPNKPNMINEGWSRIFSSMGELFNNATMNIARFNHP
ELNNIKQDSALTSADIQGLRDEISALSKRIQEPVKVSLGGQVVVRPDEPS
FFTFNQSANDQFTQDMLLSSSYPEEE
>SSO_2427 putative minor capsid protein precursor
MAFNEPLMLEPAYARVFFCALAGQLGISCLTDAVSGDSLTAGEAPAALAL
SGDDDGPRQARSYQVMNGIAVLPVSGTLVSRTRALQPYSGMTGYNGIIAR
LQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDM
NCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIY
SGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAVLD
TEAAVYSGQEAIDAGLADELVNSTDAITVMRDALDARKSRLSGGRMTKET
QSTTVSATASQADVTGVVQATEGENASAAQPDVNAQITAAVAAENSRIMG
ILNCEEAHGREEQARVLAETPGMTVETARRILAAAPQSAQTRSDTALDRL
MQGAPAPLAAGNPASDAVNDLLNTPV
>SSO_0877 putative protease/scaffold protein
MKTWFSIKAMADVVHVRIYDEIGGYGVKASALTDEINACGNVPEIHLRIH
SPGGDIFEGLAIYNALKNHPAKKIVHIEGMAASMASFIAMCGDHIVMPEN
AMMMIHAPRGVTAGVSGDVRRFADLMDKLGDTMAETYAGRTGRSKQEITA
MMEAETWMDGNECKANGFADEVIPAITAMARIESKRIGDFSNMPENIKSM
ISQKTGSGEQERLNGIRELFGTFNGRYNDLAISCLADSGCSVEDARERLL
LTMGKESTPTNKTTPANLYYAYTDNGNITGDAMRQGLNARLGHEQAERGN
PYAMMSLFDMAQASLTHRGISTGSYSTRSQIVNAAFTHSSSDFTYILAGG
AEKSVNTAAKRSASGRKKVHCQTSMRHVVLA
>SSO_3900 putative fimbrial chaperone
MSRKSCLIRLFKTTVSCKLFTAIILSVFLGQPALTYAGVVIGGTRVVYLS
NNADKSISVFSKEEKIPYLIQAWVDPFNKEDKSKAPFTVIPPVSRLEPSR
>SSO_0024 hypothetical protein
MAASPDIAKTRHQINLSNSTSFSKDGYSSNNTGITGIAGEHDQLNYGIYV
NQQQQNNDTSLGTNLSWRTPIAIIDGSYSHSKNAWQSGGSISSGLVVWPG
GINITNQLSDTFAILDAPGLEGAHINGQKYNRTNSKGQVVYDLIIPHREN
HLVLDIANSESETELQGNRQIIAPYRGAVSYVQFTTDQRKPWYIQALRPD
GSPLTFGYDVLDLQENNIGVVGQGSRLFIRVDEIPTGIKVALNDEQNLFC
TITFQHVIDENKTYICQ
>SSO_4011 conserved hypothetical protein
MRPCLIIIYHRGTCMGGISIWQLLIIAVIVVLLFGTKKLGSIGSDLGASI
KGFKKAMSDDEPKQDKTSQDADFTAKTIADKQADTNQEQAKTEDAKRHDK
EQV
>SSO_4012 conserved hypothetical protein
MAVKTVAGWIRALRSLATTVQNELTQELKLQEFQDSLKKVEKASLTNLTP
ELKASMDELRQAAESMKRSYVANDPEKASDEAHTIHNPVVKDNEAAHEGV
TPAAAQTQASSPEQKPETTPEPVVKPAADAEPKTAAPSPSSSDKP
>SSO_0026 hypothetical protein
MAAWRYASQDYRTFSDHLYENDKHYHQSDYDDFYDIGRKNSLSANIMQPL
SNNLGNVSLSALWRNYWGRSGNAKDYQFSYSNNWQHISYTFSASQSYDEN
NKEEERFNLFISIPFYWGDDIG
>SSO_3675 putative DNA processing protein
MDADSSDSTVTPGRLPDGLSSCPCFYLGKKLMNLSANAQATLLLTSDFSR
AAASEYKPLSNSEWGKFALWLKHQRISPAELLVPQPQEKLTGWSDPRISQ
ERILGLLARGHSLALAVDKWQRAGLWILTRGDADYPVRLKNRLRTDAPPV
LFGCGNKALLQAEGMAIVGSRDAPTDDLRYTQQLAAKLAQQGICVISGGA
RGIDECAMASALEAGGTAVGVLADSLLKTSTLVKWREGLIAGNLVLISPF
YPEVRFTVGNAMARNKYIYCLAESAMVVRAGMTGGTITGAMEALKHQWLP
VQVKPNQDMQSANSRLVENGASWSAEQAENVTIRLPDVPGLMYDRALRNA
QPELFSLHEDDANYAVMPAYTPVDFYQLFVAELAILAKESISIERLASCT
GLTIEQISVWLNRAEEEGRVIRLGEGHYQFR
>SSO_3803 putative adhesin
MNKIFKVIWNPATGNYTVTSETAKSRGKKSGRSKLLISALVAGGMLSSFG
ALANAGNDNGQGVDYGSGSAGDSWVAIGKGAKANTFMNTSGSSTAVGYDA
IAEGQYSSAIGSKTHAIGGASMAFGVSAISEGDRSIALGASSYSLGQYSM
ALGRYSKALGKLSIAMGDSSKAEGANAIALGNATKATEIMSIALGDTANA
SKAYSMALGASSVASEENAIALGRSSVASGTDSLAFGRQSLASAANAIAI
GAETEAAENATAIGNNAKAKGTNSMAMGFGSLADKVNTIALGNGSQALAD
NAIAIGQGNKADGVDAIALGNGSQSRGLNTIALGTASNATGDKSLALGSN
SSANGINSVALGADSIADLDNTVSVGNSSLKRKIVNVKNGAIKSDSYDAI
NGSQLYAISDSVAKRLGGGAAVDVDDGTVTAPTYNLKNGSKNNVGAALAV
LDENTLQWDQTKGKYSAAHGTSSPTASVITDVADGTISASSKDAVNGSQL
KATNDDVEANTANIATNTSNIATNTASIATNTTNITNLTDSVGDLQADAL
LWNETKKAFSAAHGQDTTSKITNVKDADLTADSTDAVNGSQLKTTNDAVA
TNTTNIANNTSNIATNTTNISNLTETVTNLGEDALKWDKDNGVFTAAHGT
ETTSKITNVKDGDLTTGSTDAVNGSQLKTTNDAVATNTTNIATNTTNISN
LTETVTNLGEDALKWDKDNGVFTAAHGNNTASKITNILDGTVTATSSDAI
NGSQLYDLSSNIATYFGGNASVNTDGVFTGPTYKIGETNYYNVGDALAAI
NSSFSTSLGDALLWDATAGKFSAKHGTNGDASVITDVADGEISDSSSDAV
NGSQLHGVSSYVVDALGGGAEVNADGTITAPTYTIANADYDNVGDALNAI
DTTLDDALLWDADAGENGAFSAAHGKDKTASVITNVANGAISAASSDAIN
GSQLYTTNKYIADALGGDAEVNADGTITAPTYTIANAEYNNVGDALDALD
DNALLWDETANGGAGAYNASHDGKASIITNVANGSISEDSTDAVNGSQLN
ATNMMIEQNTQIINQLAGNTDATYIEENGAGINYVRTNDNDLAFNDASAS
GVGATAVGYNAVASGASSVAIGQNSSSTVDTGIALGSSSVSSRVIAKGSR
DTSVTENGVVIGYDTTDGELLGALSIGDDGKYRQIINVADGSEAHDAVTV
RQLQNAIGAVATTPTKYFHANSTAEDSLAVGEDSLAMGAKTVVNGNAGIG
IGLNTLVLADAINGIAIGSNARANHANSIAMGNGSQTTRGAQTGYTAYNM
DAPQNSVGEFSVGSEDGQRQITNVAAGSADTDAVNVGQLKVTDERVAQNT
QSITNLNNQVTNLDTRVTNIENGIGDIVTTGSTKYFKTNTDGVDANAQGK
DSVAIGSGSIAAADNSVALGTGSVAEEENTISVGSSTNQRRITNVAAGVN
ATDAVNVSQLKSSEAGGVRYDTKADGSIDYSNITLGGGNGSTTRISNVSA
GVNNNDAVNYAQLKQSVQETKQYTDQRMVEMDNKLSKTESKLSGGIASAM
AMTGLPQAYTPGASMASIGGGTYNGESAVALGVSMVSANGRWVYKLQGST
NSQGEYSAALGAGIQW
>SSO_0947 putative fimbrial-like protein
MRRRFSILIWFTSEGVMLKRIIWILFLLGLTGGCELFAHDGTVNISGSFR
RNTCVLAQDSKQINVQLGDVSLTRFFHGNYGPEKSFIINLQDCGTDVSTV
DVTFSGTPDGVQSEMLSIESGTDAASGLAIAILDDAKILIPLNQASKDYS
LHSGKVPLTFYAQLRPVNSDVQSGKVNASATFVLHYD
>SSO_1492 possible enzyme
MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGAG
WLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNG
RHPEGEFSVDQGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTT
SAVVVDEGGELLVYPSGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLG
GEDSDTIVENGSIYRLGTDGLQLYSSGKTQNLSVNVGGRAEVHAGTLENA
VIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGAEL
QQSTITVQQGGVLILDGSTVKGDSVTFIVGNINLNGGKLWLITGAATHVQ
LKVKRLRGEGAICLQTSAKEISPDFINVKGEVNGDIRVEITDASRQTLCN
ALKLQPDEDGIGATLQPA
>SSO_P144 adhesion protein, fragment
MLPPNIRGYAPQITGIAETNARVVVSQQGRVIYDSTVPAGTFSIQDLSSS
VRGILDVEIFEQNGKRKHFQVEMCRCAFLIQTWSE
>SSO_2391 putative minor fimbrial subunit
MKKKRTLFFISSLMLLGSGTTIAGDNLHFTGNLISKSCTPVINGSQLAEV
HFPAIAASDLMNLGQSERVPLVFQLKDCHSSTLFNVKVTLTGTEDSALPG
FLAFDSSSSASGAGIGIETAAGTSVPINNTTGVTLPLNQGNNSLNFNTWL
QAKSGRDVTSGDFSATVTATFEYF
>SSO_2676 hypothetical protein
MCPLPCHTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRS
VLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNPFANITDIDQSAE
RVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKN
ASDSEQYAGSPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKM
VVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLL
DFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGN
SSYKIILKQSAKEFAKYNQLYPDQFQPLQRDMIGKFGAAKDQWFSSFLLQ
VENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWK
KSGPEMASLEAWLEEHEKYRSVA
>SSO_2256 ccmD, heme exporter protein C
MTPAFASWNEFFAMGGYAFFVWLAVVMTVIPLVVLVVHSVMQHRAILRGV
AQQRAREARLRAAQQQEAA
>SSO_0420 clpP, ATP-dependent proteolytic subunit of clpA-clpP serine protease
MSYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVE
DHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPD
VSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIE
IHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVD
SILTHRN
>SSO_0152 ecpD, probable pilin chaperone similar to PapD
MFFNTKHTTALCFVTCMAFSSSSIADIVISGTRVIYKSDQKSVNVRLENK
GNNPLLVQSWLDTGDNNAEPGSITVPFTATPPVSRIDAKRGQTIKLMYTA
STSLPKDRESVFWFNVLEVPPKPDAEKVANQSLLQLAFRTRIKLFYRPDG
LKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYP
IDVKMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFGGAIEGNASL
>SSO_3149 exbB, uptake of enterochelin; tonB-dependent uptake of B colicins
MGNNLMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFN
QKRRLKREQQLLAEARSLNQANDIAADFGSKSLSLHLLNEAQNELELSEG
SDDNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVW
GIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLVAAIPAVVIYNVFAR
QIGGFKAMLGDVAAQVLLLQSRDLDLEASAAAHPVRVAQKLRAG
>SSO_3148 exbD, uptake of enterochelin; tonB-dependent uptake of B colicins
MAMHLNENLDDNGEMHDINVTPFIDVMLVLLIIFMVAAPLATVDVKVNLP
ASTSTPQPRPEKPVYLSVKADNSMFIGNDPVTDETMITALNALTEGKKDT
TIFFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEETAKAK
>SSO_2767 ffh, GTP-binding export factor binds to signal sequence, GTP and RNA
MFDNLTDRLSRTLRNISGRGRLTEDNVKDTLREVRMALLEADVALPVVRE
FINRVKEKAVGHEVNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPP
AVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLET
LAEQVGVDFFPSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEA
MMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKV
DGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRILGMGDV
LSLIEDIESKVDRAQAEKLASKLKKGDGFDLNDFLEQLRQMKNMGGMASL
MGKLPGMGQIPDNVKSQMDDKVLVRMEAIINSMTMKERAKPEIIKGSRKR
RIAAGCGMQVQDVNRLLKQFDDMQRMMKKMKKGGMAKMMRSMKGMMPPGF
PGR
>SSO_0273 fhiA, flagellar biosynthesis
MLSRSDLLTLLTINFIVVTKGAERISEVSARFTLDAMPGKQMAIDADLNA
GLINQAQAQTRRKDVASEADFYGAMDGASKFVRGDAIAGMMILAINLIGG
VCIGIFKYNLSADAAFQQYVLMTIGDGLVAQIPSLLLSTAAAIIVTRVSD
NGDIAHDVRNQLLASPSVLYTATGIMFVLAVVPGMPHLPFLLFSALLGFT
GWRMSKRPQAAEAEEKSLETLTRTITETSEQQVSWETIPLIEPISLSLGY
KLVALVDKAQGNPLTQRIRGVRQVISDGNGVLLPEIRIRENFRLKPSQYA
IFINGIKADEADIPADKLMALPSSETYGEIDGVLGNDPAYGMPVTWIQPA
QKAKALNMGYQVIDSASVIATHVNKIVRSYIPDLFNYDDITQLHNRLSSM
APRLAEDLSAVLNYSQLLKVYRALLTEGVSLRDIVTIATVLVASSAVTKD
HILLAADVRLALRRSITHPFVRKQELTVYTLNNELENLLTNLVNQAQQGG
KVMLDSVPVDPNMLNQFQSTMPQVKEQMKAAGKDPVLLVPPQLRPLLARY
ARLFAPGLHVLSYNEVPDELELKIMGALM
>SSO_1091 flgM, flagellar protein
MSIDRTSPLKPVSTVQPRETTDASVTNTRAAKTTASTSTSVTLSDAQAKL
MQPGSSDINLERVEALKLAIRNGELKMDTGKIADALINEAQQDLQSN
>SSO_1090 flgN, protein of flagellar biosynthesis
MTRLAEILDQMSAVLNDLKTVMDQEQQHLSMGQINGSQLQWITEQKSSLL
ATLDYLEQLRRKEPNTANSVDISQRWQEITVKTQQLRQMNQHNGWLLEGQ
IERNQQALEMLKPHQEPTLYGANGQTSTTHRGGKKISI
>SSO_1240 flhB, putative part of export apparatus for flagellar proteins
MFNCVGCVHYIFNDPNLILGQIILLIREAMLALLPLISGVVLVALISPVM
LGGLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVT
GFYLWHHWPQMMRLMAESPTTAMGNAMDLVGLCALLVVLGVIPMVGFDVF
FQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADV
PKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAENNV
PTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQR
PVQPTHLPVPEALDFINEKPTHE
>SSO_1995 fliE, flagellar basal-body component
MSAIQGIEGVISQLQATAMSARAQESLPQPTISFAGQLHAALDRISDTQT
AARTQAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVM
SMQV
>SSO_1996 fliF, flagellar basal-body MS(membrane and supramembrane)-ring and collar protein
MNATAAQTKSLEWLNRLRANPKIPLIVAGSAAVAVMVALILWAKAPDYRT
LFSNLSDQDGGAIVSQLTQMNIPYCFSEASGAIEVPADKVHELRLRLAQQ
GLPKGGAVGFELLDQEKFGISQFSEQVNYQRALEGELSRTIETIGPVKGA
RVHLAMPKPSLFVREQKSPSASVTVNLLPGRALDEGQISAIVHLVSSAVA
GLPPGNVTLVDQGGHLLTQSNTSGRDLNDAQLKYASDVEGRIQRRIEAIL
SPIVGNGNIHAQVTAQLDFASKEQTEEQYRPNGDESHAALRSRQLNESEQ
SGSGYPGGVPGALSNQPAPANNAPISTPPANQNNRQQQASTTSNSGPRST
QRNETSNYEVDRTIRHTKMNVGDVQRLSVAVVVNYKTLPDGKPLPLSNEQ
MKQIEDLTREAMGFSEKRGDSLNVVNSPFNSSDESGGELPFWQQQAFIDQ
LLAAGRWLLVLLVAWLLWRKAVRPQLTRRAEAMKAVQQQAQAREEVEDAV
EVRLSKDEQLQQRRANQRLGAEVMSQRIREMSDNDPRVVALVIRQWINND
HE
>SSO_1998 fliH, flagellar biosynthesis protein
MAAARIPMSDNLPWKTWTPDDLAPPQAEFVPMVEPEETIIEEAEPSLEQQ
LAQLQMQAHEQGYQAGIAEGRQQGHEQGYQEGLAQGLEQGLAEAKSQQAP
IHARMQQLVSEFQTTLDALDSVIASRLMQMALEAARQVIGQTPTVDNSAL
IKQIQQLLQQEPLFSGKPQLRVHPDDLQRVDDMLGATLSLHGWRLRGDPT
LHPGGCKVSADEGDLDASVATRWQELCRLAAPGVV
>SSO_1999 fliI, flagellum-specific ATP synthase
MTTRLTRWLTTLDNFEAKMAQLPAVRRYGRLTRATGLVLEATGLQLPLGA
TCVIERQNGSETHEVESEVVGFNGQRLFLMPLEEVEGVLPGARVYAKNIS
AEGLQSGKQLPLGPALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNPL
QRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTR
ADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGA
AYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPS
VFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGH
IVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQR
NRDLVSVGAYAKGSDPMLDKAIALWPQLEGYLQQGIFERADWEASLQGLE
RIFPTVS
>SSO_2000 fliJ, flagellar fliJ protein
MAEHGALATLKDLAEKEVEDAARLLGEMRRGCQQAEEQLKMLIDYQNEYR
NNLNSDMSAGMTSNRWINYQQFIQTLEKAITQHRQQLNQWTQKVDIALNS
WREKKQRLQAWQTLQERQSTAALLAENRLDQKKMDEFAQRAAMRKPE
>SSO_2004 fliN, FliN
MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAADAVFQQFGGGDVSGT
LQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDIL
INGYLISQGEVVVVADKYGVRITDIITPSERMRRLSR
>SSO_2006 fliP, flagellar biosynthesis
MRRLLSVAPVLLWLVTPLAFAQLPGITSQPLPGGGQSWSLPVQTLVFITS
LTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFI
MSSVIDKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLF
ARLANTGPLQGPEAVPMRILLPAYVTSELKTAFQIGFTIFIPFLIIDLVI
ASVLMALGMMMVPPATIALPFKLMLFVLVDGWQLLVGSLAQSFYS
>SSO_2007 fliQ, flagellar biosynthesis
MTPESVMMMGTEAMKVALALAAPLLLVALVTGLIISILQAATQINEMTLS
FIPKIIAVFIAIIIAGPWMLNLLLDYVRTLFTNLPYIIG
>SSO_2008 fliR, flagellar biosynthesis
MMQVTSDQWLSWLSLYFWPLLRVLALISTAPILSERSVPKRVKLGLAMMI
TFVIAPSLPANDVPVFSFFALWLAVQQILIGIALGFTMQFAFAAVRTAGE
IIGLQMGLSFATFVDPASHLNMPVLARIMDMLALLLFLTFNGHLWLISLL
VDTFHTLPIGGEPLNSNAFLALTKAGSLIFLNGLMLALPLITLLLTLNLA
LGLLNRMAPQLSIFVIGFPLTLTVGISLMAALMPLIAPFCEHLFSEMFNL
LADIISELPLI
>SSO_1981 fliS, flagellar repressor of class 3a and 3b operons
MYTASGSKAYAQIGVESAVMSASQQQLVTMLFDGVLSALVRARLFMQDNN
QQGKGVSLSKAINIIENGLRVSLDEESKDELTQNLIALYSYMVRRLLQAN
LRNDVSAVEEVEALMRNIADAWKESLLSPSLIQDPV
>SSO_3702 ftsY, cell division membrane protein
MAKEKKRGFFSWLGFGQKEQTPEKETEVQNEQPVVEEIVQAQEPVKASEQ
AVEEQPQAHTEAEAETFAADVVEVTEQVVESEKAQPEAEVVAQPEPVVEE
TPEPVAIEREELPLPEDVNAEEVSPEEWQAEAETVEIVKAAEEEAAKEEI
TDEELEAQALAAEAAEEAVMVVPPAEEEQPVEEIAQEQEKPTKEGFFARL
KRSLLKTKENLGSGFISLFRGKKIDDDLFEELEEQLLIADVGVETTRKII
TNLTEGASRKQLRDAEALYGLLKEEMGEILAKVDEPLNVEGKTPFVILMV
GVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNI
PVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKK
IVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLD
GTAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKADDFIEALFARED
>SSO_0114 hofC, putative integral membrane protein
MASKQLWRWHGITGDGNAQDGMLWAESRALLLMALQQQMVTPLSLKRIAI
NSAQWRGDKSAEVIHQLATLLKAGLTLSEGLALLAEQHPSKQWQALLQSL
AHDLEQGIAFSNALLPWSEVFPPLYQAMIRTGELTGKLDECCFELARQQK
AQRQLTDKVKSALRYPIIILAMAIMVVVAMLHFVLPEFAAIYKTFNTPLP
ALTQGIMTLADFSGEWSWLLVLFGFLLAIANKLLMRRPTWLIVRQKLLLR
IPIMGSLMRGQKLTQIFTILALTQSAGITFLQGVESVRETMRCPYWVQLL
TQIQHDISNGHPIWLALKNTGEFSPLCLQLVRTGEASGSLDLMLDNLAHH
HRDNTMALADNLAALLEPTLLIITGGIIGTLVVAMYLPIFHLGDAMSGMG
>SSO_3522 hofQ, putative transport portein
MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVV
SPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNN
IARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDK
RTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGV
KWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSA
LEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEA
VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQV
EVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERREL
VVFITPRLVSSE
>SSO_P143 icsA/virG, IcsA/VirG
MNQIHKFFCNMTQCSQGGAGELPTVKEKTCKLSFSPFVVGASLLLGGPIA
FAIPLSGTQELHFSEDNYEKLLTPVDGLSPLGAGEDGMDAWYITSSNPSH
ASRTKLRINSDIMISAGHGGAGDNNDGNSCGGNGGDSITGSDLSIINQGM
ILGGNGGSGADHNGDGGEAVTGDNLFIINGEIISGGHGGDSYSDSDGGNG
GDAVTGVNLPIINKGTISGGNGGNNYGEGDGGNGGDAITGSSLSVINKGT
FAGGNGGAAYGYGYDGYGGNAITGDNLSIINNGAILGGNGGHWGDAINGS
NMTIANSGYIISGKEDDGTQNVVGNAIHITGGNNSLILHEGSVITGDVQV
NNSSILKIINNDYTGTTPTIEGDLCAGDCTTVSLSGNKFTVSGDVSFGEN
SSLNLAGISSLEASGNMSFGNNVKVEAIINNWAQKDYKLLSADKGITGFS
VSNISIINPLLTTGAIDYTKSYISDQNKLIYGLSWNDTDGDSHGEFNLKE
NAELTVSTILADNLSHHNINSWDGKSLTKSGEGTLILAEKNTYSGFTNIN
AGILKMGTVEAMTRTAGVIVNKGATLNFSGMNQTVNTLLNSGTVLINNIN
APFLPDPVIVTGNMTLEKNGHVILNNSSSNVGQTYVQKGNWHGKGGILSL
GAVLGNDNSKTDRLEIAGHASGITYVAVTNEGGSGDKTLEGVQIISTDSS
DKNAFIQKGRIVAGSYDYRLKQGTVSGLNTNKWYLTSQMDNQESKQMSNQ
ESTQMSSRRASSQLVSSLNLGEGSIHTWRPEAGSYIANLIAMNTMFSPSL
YDRHGSTIVDPTTGQLSETTMWIRTVGGHNEHNLADRQLKTTANRMVYQI
GGDILKTNFTDHDGLHVGIMGAYGYQDSKTHNKYTSYSSRGTVSGYTAGL
YSSWFQNEKERTGLYMDAWLQYGWFNNTVKGDGLTGEKYSSKGITGALEA
GYIYPTIRWTAHNNIDNALYLNPQVQITRHGVKANDYIEHNGTMVTSSGV
NNIQAKLGLRTSLISQSCIDKETLRKFEPFLEVNWKWSSKQYGVIMNGMS
NHQIGNRNVIELKTGVGGRLADNLSIWGNVSQQLGNNSYRDTQGILGVKY
TF
>SSO_2692 lepB, leader peptidase
MANMFALILVIATLVTGILWCVDKFFFAPKRRERQAAAQAAAGDSLDKAT
LKKVAPKLGWLETGASVFPVLAIVLIVRSFIYEPFQIPSGSMMPTLLIGD
FILVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVG
LPGDKVTYDPVSKELTIQPGCSSGQACENALPVTYSNVEPSDFVQTFSRR
NGGEATSGFFEVPKNETKENGIRLSERKETLGDVTHRILTVPIAQDQVGM
YYQQPGQQLATWIVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGRATAI
WMSFDKQEGEWPTGVRLSRIGGIH
>SSO_3899 lpfA, putative major fimbrial subunit
MKRNIIGGAFTLASLMLAGHALAEDGVVHFVGEIVDTTCEVTSDTADQIV
PLGKVSKNAFSGVGSLASPQKFSIKLENCPATYTQAAVRFDGTEAPGGDG
DLKVGTPLTAGNPGDFTGTGQAIAATGVGIRIFNQSDNSQVKLYNDSAYT
AIDAEGKAEMKFIARYVATNATVTAGTANADSQFTVEYKK
>SSO_0032 lspA, prolipoprotein signal peptidase
MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFPSLNLHY
ARNYGAAFSFLADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIA
YALIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAAL
IVLEGFLPSRAKKQ
>SSO_P109 mxiA, MxiA
MKVIQSFLKQVSTKPELIILVLMVMIIAMLIIPLPTYLVDFLIGLNIVLA
ILVFMGSFYIERILSFSTFPSVLLITTLFRLALSISTSRLILVDADAGKI
ITTFGQFVIGDSLAVGFVIFSIVTVVQFIVITKGSERVAEVAARFSLDGM
PGKQMSIDADLKAGIIDAAGAKERRSILERESQLYGSFDGAMKFIKGDAI
AGIIIIFVNLIGGISVGMSQHGMSLSGALSTYTILTIGDGLVSQIPALLI
SISAGFIVTRVNGDSDNMGRNIMSQIFGNPFVLIVTSALALAIGMLPGFP
FFVFFLIAVTLTALFYYKKVVEKEKSLSESDSSGYTGTFDIDNSHDSSLA
MIENLDAISSETVPLILLFAENKINANDMEGLIERIRSQFFIDYGVRLPT
ILYRTSNELKVDDIVLLINEVRADSFNIYFDKVCITDENGDIDALGIPVV
STSYNERVISWVDVSYTENLTNIDAKIKSAQDEFYHQLSQALLNNINEIF
GIQETKNMLDQFENRYPDLLKEVFRHVTIQRISEVLQRLLGENISVRNLK
LIMESLALWAPREKDVITLVEHVRASLSRYICSKIAVSGEIKVVMLSGYI
EDAIRKGIRQTSGGSFLNMDIEVSDEVMETLAHALRELRNAKKNFVLLVS
VDIRRFVKRLIDNRFKSILVISYAEIDEAYTINVLKTI
>SSO_P107 mxiD, MxiD
MKKFNIKSLTLLIVLLPLIVNANNIDSHLLEQNDIAKYVAQSDTVGSFFE
RFSALLNYPIVVSKQAAKKRISGEFDLSNPEEMLEKLTLLVGLIWYKDGN
ALYIYDSGELISKVILLENISLNYLIQYLKDANLYDHRYPIRGNISDKTF
YISGPPALVELVANTATLLDKQVSSIGTDKVNFGVIKLKNTFVSDRTYNM
RGEDIVIPGVATVVERLLNNGKALSNRQAQNDPMPPFNITQKVSEDSNDF
SFSSVTNSSILEDVSLIAYPETNSILVKGNDQQIQIIRDIITQLDVAKRH
IELSLWIIDIDKSELNNLGVNWQGTASFGDSFGASFNMSSSASISTLDGN
KFIASVMALNQKKKANVVSRPVILTQENIPAIFDNNRTFYVSLVGERNSS
LEHVTYGTLINVIPRFSSRGQIEMSLTIEDGTGNSQSNYNYNNENTSVLP
EVGRTKISTIARVPQGKSLLIGGYTHETNSNEIVSIPFLSSIPVIGNVFK
YKTSNISNIVRVFLIQPREIKESSYYNTAEYKSLISEREIQKTTQIIPSE
TTLLEDEKSLVSYLNY
>SSO_P101 mxiJ, MxiJ
MIRYKGFILFLLLMLIGCEQREELISNLSQRQANEIISVLERHNITARKV
DGGKQGISVQVEKGTFASAVDLMRMYDLPNPERVDISQMFPTDSLVSSPR
AEKARLYSAIEQRLEQSLVSIGGVISAKIHVSYDLEEKNISSKPMHISVI
AIYDSPKESELLVSNIKRFLKNTFSDVKYENISVILTPKEEYVYTNVQPV
KEIKSEFLTNEVIYLFLGMAVLVVILLVWAFKTGWFKRNKI
>SSO_2983 ppdA, prepilin peptidase dependent protein A
MKTQRGYTLIETLVAMLILVMLSASGLYGWQYWQQSQRLWQTASQARDYL
LYLREDANWHNRDHSISVIREGTLWCLVSSAAGANTCHGSSPLVFVPRWP
EVEMSDLTPSLAFFGLRNTAWAGHIRFKNSTGEWWLVVSPWGRLRLCQQG
ETEGCL
>SSO_2982 ppdB, prepilin peptidase dependent protein B
MPVKEQGFSLLEVLIAMAISSVLLLGAARFLPALQRESLTSTRKLALEDE
IWLRVFTVAKHLQRAGYCHGSCTGEGLEIVGQGDCIIVQWDANSNGIWDR
EPVKESDQIGFRLKEHVLETLRGATSCEGKGWDKVTNPDAIIIDTFQVVR
QDVSGFSPVLTVNMRAASKSEPQTVVDASYSVTGFNL
>SSO_0116 ppdD, prelipin peptidase dependent protein
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYR
TAVELCALEHGGLDTCDGGSNGIPSPTTTRYVSAMSVAKGVVSLTGQESL
NGLSVVMTPGWDNANGVTGWARNCNIQSDSALQQACEDVFRFDDAN
>SSO_3441 prlA, putative ATPase subunit of translocase
MAKQPGLDFQSAKGGLGELKRRLLFVIGALIVFRIGSFIPIPGIDATVLA
KLLEQQRGTIIEMFNMFSGGALSRASIFALGIMPYISASIIIQLLTVVHP
TLAEIKKEGESGRRKISQYTRYGTLVLAIFQSIGIATGLPNMLGMQGMVI
NPGFAFYFSAVVSLVTGTMFLMWLGEQITERGIGNGISIIIFVGIVAGLP
PAIAHTIEQARQGDLHFLVLLLVAVLVFAVTFFVVFVERGQRRIVVNYAK
RQQGRRVYAAQSTHLPLKVNMAGVIPAIFASSIILFPATIASWFGGGTGW
NWLTTISLYLQPGQPLYVLLYASAIIFFCFFYTALVFNPRETADNLKKSG
AFVPGIRPGEQTAKYIDKVMTRLTLVGALYITFICLIPEFMRDAMKVPFY
FGGTSLLIVVVVIMDFMAQVQTLMMSSQYESALKKANLKGYGR
>SSO_0106 secA, preprotein translocase; secretion protein
MLIKLLTKVFGSRNDRTLRRMRKVVNIINAMEPEMEKLSDEELKGKTAEF
RARLEKGEVLENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIA
EMRTGEGKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDAENNRPLFEFL
GLTVGINLPGMPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQ
RKLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYKRVNKIIPHLIRQE
KEDSETFQGEGHFSVDEKSRQVNLTERGLVLIEELLVKEGIMDEGESLYS
PANIMLMHHVTAALRAHALFTRDVDYIVKDGEVIIVDEHTGRTMQGRRWS
DGLHQAVEAKEGVQIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFE
FSSIYKLDTVVVPTNRPMIRKDLPDLVYMTEAEKIQAIIEDIKERTAKGQ
PVLVGTISIEKSELVSNELTKAGIKHNVLNAKFHANEAAIVAQAGYPAAV
TIATNMAGRGTDIVLGGSWQAEVAALENPTAEQIEKIKADWQVRHDAVLE
AGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFAS
DRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYDD
VANDQRRAIYSQRNELLDVSDVSETINSIREDVFKATIDAYIPPQSLEEM
WDIPGLQERLKNDFDLDLPIAEWLDKEPELHEETLRERILAQSIEVYQRK
EEVVGAEMMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKDPK
QEYKRESFSMFAAMLESLKYEVISTLSKVQVRMPEEVEELEQQRRMEAER
LAQMQQLSHQDDDSAAAAALAAQTGERKVGRNDPCPCGSGKKYKQCHGRL
Q
>SSO_3796 secB, SecB
MSEQNNTEMTFQIQRIYTKDISFEAPNAPHVFQKDWQPEVKLDLDTASSQ
LADDVYEVVLRVTVTASLGEETAFLCEVQQGGIFSIAGIEGTQMAHCLGA
YCPNILFPYARECITSVVSRGTFPQLNLAPINFDALFMNYLQQQAGEGTE
EHQDA
>SSO_0385 secD, SecD
MLNRYPLWKYVMLIVVIVIGLLYALPNLFGEDPAVQITGARGVAASEQTL
IQVQKTLQEEKITAKSVALEEGAILARFDSTDTQLRAREALMGVMGDKYV
VALNLAPATPRWLAAIHAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQN
IDSLRSDLREKGIPYTTVRKENNYGLSITFRDAKARDEAIAYLSKRHPDL
VISSQGSNQLRAVMSDARLSEAREYAVQQNINILRNRVNQLGVAEPVVQR
QGADRIVVELPGIQDTARAKEILGATATLEFRLVNTNVDQAAAASGRVPG
DSEVKQTREGQPVVLYKRVILTGDHITDSTSSQDEYNQPQVNISLDSAGG
NIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAVLVKQEEVINIANIQS
RLGNSFRITGINNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNI
EQGLEACLAGLLVSILFMIIFYKKFGLIATSALIANLILIVGIMSLLPGA
TLSMPGIAGIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYRGAF
SSIFDANITTLIKVIILYAVGTGAIKGFAITTGIGVATSMFTAIVGTRAI
VNLLYGGKRVKKLSI
>SSO_4154 secE, preprotein translocase
MSANTEAQGSGRGLEAMKWVVVVALLLVAIVGNYLYRDIMLPLRALAVVI
LIAAAGGVALLTTKGKATVAFAREARTEVRKVIWPTRQETLHTTLIVAAV
TAVMSLILWGLDGILVRLVSFITGLRF
>SSO_0386 secF, SecF
MAQEYTVEQLNHGRKVYDFMRWDYWAFGISGLLLIAAIVIMGVRGFNWGL
DFTGGTVIEITLEKPAEIDVMRDALQKAGFEEPMLQNFGSSHDIMVRMPP
AEGETGGQVLGSQVLKVINESTNQNAAVKRIEFVGPSVGADLAQTGAMAL
MAALLSILVYVGFRFEWRLAAGVVIALAHDVIITLGILSLFHIEIDLTIV
ASLMSVIGYSLNDSIVVSDRIRENFRKIRRGTPYEIFNVSLTQTLHRTLI
TSGTTLMVILMLYLFGGPVLEGFSLTMLIGVSIGTASSIYVASALALKLG
MKREHMLQQKVEKEGADQPSILP
>SSO_3323 secG, SecG
MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFGSSGSGN
FMTRMTALLATLFFIISLVLGNINSNKTNKGSEWENLSAPAKTEQTQPAA
PAKPTSDIPN
>SSO_0507 sfmF, putative fimbrial-like protein
MRRVLFSCFCGLLWSSSGWAADPLGTININLHGNVVDFSCTVNTADIDKT
VDLGRWPTTQLLNAGDTTALVPFSLRLEGCPPGSVAILFTGTPASDTNLL
ALDDPAMAQTVAIELRNSDRSRLALGEASPTEEVDANGNVTLNFFANYRA
LASGVQPGVEKADAIFMINYN
>SSO_3223 sigA, serine protease
MNKIYSLKYSHITGGLVAVSELTRKVSVGTSRKKVILGIILSSIYGSYGE
TAFAAMLDINNIWTRDYLDLAQNRGEFRPGATNVQLMMKDGKIFHFPELP
VPDFSAVSNKGATTSIGGAYSVTATHNGTQHHAITTQSWDQTAYKASNRV
SSGDFSVHRLNKFVVETTGVTESADFSLSPEDAMKRYGVNYNGKEQIIGF
RAGAGTTSTILNGKQYLFGQNYNPDLLSASLFNLDWKNKSYIYTNRTPFK
NSPIFGDSGSGSYLYDKEQQKWVFHGVTSTVGFLSSTNIAWTNYSLFNNI
LVNNLKKNFTNTMQLDGKKQELSSIIKDKDLSVSGGGELTLKQDTDLGIG
GLIFDKNQTYKVYGKDKSYKGAGIDIDNNTTVEWNVKGVAGDNLHKIGSG
TLDVKIAQGNNLKIGNGTVILSAEKAFNKIYMAGGKGTVKINAKDALSES
GNGEIYFTRNGGTLDLNGYDQSFQKIAATDAGTTVTNSNVKQSTLSLTNT
DAYMYHGNVSGNISINHIINTTQQHNNNANLIFDGSVDIKNDISVRNAQL
TLQGHATEHAIFKEGNNNCPIPFLCQKDYSAAIKDQESTVNKRYNTEYKS
NNQIASFSQPDWESRKFNFRKLNLENATLSIGRDANVKGHIEAKNSQIVL
GNKTAYIDMFSGRNITGEGFGFRQQLRSGDSAGESSFNGSLSAQNSKITV
GDKSTVTMTGALSLINTDLIINKGATVTAQGKMYVDKAIELAGTLTLTGT
PTENNKYSPAIYMSDGYNMTEDGATLKAQNYAWVNGNIKSDKKASILFGV
DQYKEDNLDKTTHTPLATGLLGGFDTSYTGGIDAPAASASMYNTLWRVNG
QSALQSLKTRDSLLLFSNIENSGFHTVTVNTLDATNTAVIMRADLSQSVN
QSDKLIVKNQLTGSNNSLSVDIQKVGNNNSGLNVDLITAPKGSNKEIFKA
STQAIGFSNISPVISTKEDQEHTTWTLTGYKVAENTASSGAAKSYMSGNY
KAFLTEVNNLNKRMGDLRDTNGEAGAWARIMSGAGSASSGYSDNYTHVQI
GVDKKHELDGLDLFTGLTMTYTDSHASSNAFSGKTKSVGAGLYASAIFDS
GAYIDLISKYVHHDNEYSATFAGLGTKDYSSHSLYVGAEAGYRYHVTEDS
WIEPQAELVYGAVSGKRFDWQDRGMSVTMKDKDFNPLIGRTGVDVGKSFS
GKDWKVTARAGLGYQFDLFANGETVLRDASGEKRIKGEKDGRILMNVGLN
AEIRDNLRFGLEFEKSAFGKYNVDNAINANFRYSF
>SSO_3426 smf, Predicted Rossmann-fold nucleotide-binding protein
MVDTEIWLRLMSISSLYGDDMVRIAHWLAKQSQIDAVGLQQTGLTLRQAQ
RFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLVTTDYPGALFVEG
ELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDG
VAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEHGGALVSEFPLD
VPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQRREVFAL
PGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS
PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGW
IAAVPGGYVRLRRACHVRRTNVFV
>SSO_1871 sohB, putative protease
MELLSEYGLFLAKIVTVVLAIAAIAAIIVNVAQRNKRQRGELRVNNLSEQ
YKEMKEELAAALMDSHQQKQWHKAQKKKHKQEAKAAKAKAKLGEVATDSK
PRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQVVLRLESPGGMVHG
YGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGS
IGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREE
LNETHQLFKDFVKRMRPSLDIEQVATGEHWYGQQAVEKGLVDEINTSDEV
ILSLMEGREVVNVRYMQRKRLIDRFTGSAAESADRLLLRWWQRGQKPLM
>SSO_P115 spa24, Spa24
MLSDMSLIATLSFFTLLPFLVAAGTCYIKFSIVFVMVRNALGLQQVPSNM
TLNGIALIMALFVMKPIIEAGYENYLNGPQKFDTISDIVRFSDSGLMEYK
QYLKKHTDLELARFFQRSEEENADLKSAENNDYSLFSLLPAYALSEIKDA
FKIGFYLYLPFVVVDLVISSILLALGMMMMSPITISVPIKLVLFVALDGW
GILSKALIEQYINVPA
>SSO_P116 spa29, Spa29
MDISSWFESIHVFLILLNGVFFRLAPLFFFLPFLNNGIISPSIRIPVIFL
VASGLITSGKVDIGSSVFEHVYFLMFKEIIVGLLLSFCLSLPFWIFHAVG
SIIDNQRGATLSSSIDPANGVDTSELAKFFNLFSAVVFLYSGGMVFILES
IQLSYNICPLFSQCSFRVSNILTFLTLLASQAVILASPVMIVLLLSEVLL
GVLSRFAPQMNAFSVSLTIKSLLAIFIIFICSSTIYFSKVQFFLGEHKFF
TNLFVR
>SSO_P114 spa33, Spa33
MLRIKHFDANEKLQILYAKQLCERFSIQTFKNKFTGSESLVTLTSVCGDW
VIRIDTLSFLKKKYEVFSGFSTQESLLHLSKCVFIESSSVFSIPELSDKI
TFRITNEIQYATTGSHLCCFSSSLGIIYFDKMPVLRNQVSLDLLHHLLEF
CLGSSNVRLATLKRIRTGDIIIVQKLYNLLLCNQVIIGDYIVNDNNEAKI
NLSESNGESEHTEVSLALFNYDDINVKVDFILLEKNMTINELKMYVENEL
FKFPDDIVKHVNIKVNGSLVGHGELVSIEDGYGIEISSWMVKE
>SSO_P117 spa40, Spa40
MANKTEKPTPKKLKDAAKKGQSFKFKDLTTVVIILVGTFTIISFFSLSDV
MLLYRYVIINDFEINEGKYFFAVVIVFFKIIGFPLFFCVLSAVLPTLVQT
KFVLATKAIKIDFSVLNPVKGLKKIFSIKTIKEFFKSILLLIILALTTYF
FWINDRKIIFSQVFSSVDGLYLIWGGLFKDIILFFLAFSIFVIILDFVIE
FILYMKDMMMDKQEIKREYIEQEGHFETKSRRRELHIEILSEQTKSDIRN
SKLVVMNPTHIAIGIYFNPEIAPAPFISLIETNQCALAVRKYANEVGIPT
VRDVKLARKLYKTHTKYSFVDFEHLDEVLRLIVWLEQVENTH
>SSO_P111 spa47, Spa47
MSYTKLLTQLSFPNRISGPILETSLSDVSIGEICNIQAGIESNEIVARAQ
VVGFHDEKTILSLIGNSRGLSRQTLIKPTAQFLHTQVGRGLLGAVVNPLG
EVTDKFAVTDNSEILYRPVDNAPPLYSERAAIEKPFLTGIKVIDSLLTCG
EGQRMGIFASAGCGKTFLMNMLIEHSGADIYVIGLIGERGREVTETVDYL
KNSEKKNRCVLVYATSDYSSVDRCNAAYIATAIAEFFRTEGHKVALFIDS
LTRYARALRDVALAAGESPARRGYPVSVFDSLPRLLERPGKLKAGGSITA
FYTVLLEDDDFADPLAEEVRSILDGHIYLSRNLAQKGQFPAIDSLKSISR
VFTQVVDEKHRIMAAAFRELLSEIEELRTIIDFGEYKPGENASQDKIYNK
ISVVESFLKQDYRLGFTYEQTMELIGETIR
>SSO_1389 sppA, protease IV, a signal peptide peptidase
MRTLWRFIAGFFKWTWRLLNFVREMVLNLFFIFLVLVGVGIWMQVSGGDS
KETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDI
VNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYA
VGENYSQGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVST
HVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIP
AQQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASSAEIEKALTKEFG
WSKTDKNYRAISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGD
TTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVV
VSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGV
HTDGVSTSPLADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTP
EQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQWHLEYY
VDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPLASVTSTVKSESDKLAA
FNDPQNRYAFCLTCANVR
>SSO_1414 spy, periplasmic protein related to spheroblast formation
MRKLTALFVASTLALGAANLAHAADTTTAAPADAKPMMHHKGKFGPHQDM
MFKDLNLTDAQKQQIREIMKGQRDQMKRPPLEERRAMHDIIASDTFDKAK
AEAQIAKMEEQRKANMLAHMETQNKIYNILTPEQKKQFNANFEKRLTERP
AAR
>SSO_0692 tolB, periplasmic protein
MKQALRVAFGFLILWASVLHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAA
PEDIGGIVAADLRNSGKFNPLDRARLPQQPGSAQEVQPAAWSALGIDAVV
VGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASD
EVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQ
PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPA
FSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQ
NLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVS
SNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSV
LNLVSTDGRFKARLPATDGQVKFPAWSPYL
>SSO_3173 tolC, TolC
MQMKKLLPILIGLSLSGFSSLSQAENLMQVYQQARLSNPELRKSAADRDA
AFEKINEARSPLLPQLGLGADYTYSNGYRDANGINSNATSASLQLTQSIF
DMSKWRALTLQEKAAGIQDVTYQTDQQTLILNTATAYFNVLNAIDVLSYT
QAQKEAIYRQLDQTTQRFNVGLVAITDVQNARAQYDTVLANEVTARNNLD
NAVEQLRQITGNYYPELAALNVENFKTDKPQPVNALLKEAEKRNLSLLQA
RLSQDLAREQIRQAQDGHLPTLDLTASTGISDTSYSGSKTRGAAGTQYDD
SNMGQNKVGLSFSLPIYQGGMVNSQVKQAQYNFVGASEQLESAHRSVVQT
VRSSFNNINASISSINAYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDAT
TTLYNAKQELANARYNYLINQLNIKSALGTLNEQDLLALNNALSKPVSTN
PENVAPQTPEQNAIADGYAPDSPAPVVQQTSARTTTSNGHNPFRN
>SSO_0689 tolQ, membrane-spanning inner membrane protein
MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAE
AFEDKFWSGIELSRLYQESQGKRDNLTGSEQIFYSGFKEFVRLHRANSHA
PEAVVEGASRAMRISMNRELENLETHIPFLGTVGSISPYIGLFGTVWGIM
HAFIALGAVKQATLQMVAPGIAEALIATAIGLFAAIPAVMAYNRLNQRVN
KLELNYDNFMEEFTAILHRQAFTVSESNKG
>SSO_0690 tolR, putative inner membrane protein
MARARGRGRRDLKSEINIVPLLDVLLVLLLIFMATAPIITQSVEVDLPDA
TESQAVSSNDNPPVIVEVSGIGQYTVVVEKDRLERLPPEQVVAEVSSRFK
ANPKTVFLIGGAKDVPYDEIIKALNLLHSAGVKSVGLMTQPI
>SSO_P190 traD, TraD protein
MFSQIANIMLYCLFIFFWILVGLVLWVKISWQTFVNGCIYWWCTTLEGMR
DLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCGEQLWSAFVLATVVAL
VICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGRDS
DIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYD
RSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPM
GTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYL
RNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWM
RGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRV
WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAA
TLFDVMNTRAFFRSPSHKIAEFAVGEIGEKEHLKASEQYSYGADPVRDGV
STGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQERPKVAP
EFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAE
QPQQPQQPQQPQQPQQPQQPQQPQQPQQPQQPQQPQQPQQPVSPVINDKK
SDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQE
NHPDTWQQMQRREEVNINVHRERGEDVEPGDDF
>SSO_0145 yadK, putative fimbrial protein
MHPTQRKLMKRIILFLSLQFPITYPAIAGQDIDLVANVKNSTCKSGISNQ
GNIDLGVVGVGYFSDNVTPESYQPGGKEFTVTVSDCALQGTGDVLNQLHI
DFRALSGVMAAGSRQIFANEVATGAKNVGVVLFSIQDPTNIFNVISSAGN
SRSVYPVMTSALHNSSWKFYARMQKIDPALDVISGQVMSHILVDVYYE
>SSO_0153 yadN, putative fimbrial-like protein
MSKKLGFALSGLMLAMVAGTASADMDGGQLNISGLVVDNTCETRVDGGNK
DGLILLQTATVGEIDAGVLNDTVGAKAKPFSITVDCSKANPNPGSTAKMT
FGSVFFGNSKGTLNNDMSINNPSDGVNIALHNIDGSTIKQVQINNPGDVY
TKALDATTKSAVYDFKASYVRAVADQTATAGYVKTNTAYTITYQ
>SSO_0349 yaiU, flagellar protein
MHSWKKKLVVSQLALACTLAITSQANAATYNTFGYHDDAATIYNWGDSTK
IDHDYLTYGGYVYDHAADGYFDTTFSGDTVNGVISTYYLNHDYGTDTGNT
LNISNSIVHGMVTSYQVGYGDYVWTNGSDYTGHDWVDGDIFTLNIANSTI
DDDFDAFYFTDTYLDADGKTSKTDYDRLVTAGLGTAVTLDVESNINISNN
SHVAGITLVQHDLGNATYNTEGHQWDNNIVVNDSTVTSGSWTEDEQSDRG
HFGNSVEPSDYGNGASPADDVALAFIDDDTSDYRMVNNVTFNNSQLLGDV
VFDSTWNANFDATGHLIDNSTTAYTHGGWATDDQNVDHLNLTLNNTKWVG
SANIDYDVVVADEAFYDVAPNSLNPYASYSEDGWNRVDNANAFQSGVFDV
VLNNGSDWETTKTSLIDTLAINSGSQVNVSADSSLTSDTITLNGGSSMEV
NGEVNTDHLTIDTFSTVNFGEDTASAWAYAPLYANTITVTNGGVLDVNTN
MNDISSVFATDTLELTSGNVKDNNGNVYAGVFDIHSNDYILNADLVNDRT
NDTSKANYGYGVIAMNSDGHLTVNGNNDINNGDEVDNSSADNVVAATGNY
KVRIDNSTGAGAIADYAGKQLIYIDDTKTNATFSAANKADLGAYTYQAEQ
RGNTVVLQQMELTDYANMALSIPSANTNIWNLEQDTVGTRLTNSRHGLAD
NGGAWVSYFGGNFNGDNGTINYDQDVNGIMVGVDTKVDGNNAKWIVGAAA
GFAKGDMNDRSGQVDQDSQTAYIYSSAHFANNVFVDGSLSYSHFNNDLSA
TMSNGTYVDGSTNSDAWGFGLKAGYDFKLGDAGYVTPYGSVSGLFQSGDD
YQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDS
NNDNDVNGDSIDNGTEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQ
DWSANVGVKYTW
>SSO_0384 yajC, conserved hypothetical protein
MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQKRTKEHK
KLMDSIAKGDEVLTNGGLVGRVTKVAENGYIAIALNDTTEVVIKRDFVAA
VLPKGTMKAL
>SSO_0477 ybbJ, conserved hypothetical protein
MELMVVHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGLVVWLVPL
GWEWQGVMFAILTLLAAWLWWKWLSRRVREQKHSDSHLNQRGQQLIGRRF
VLESPLVNGRGHMRVGDSSWPVSASEDLGAGTHVEVIAIEGITLHIRAVS
S
>SSO_0580 ybeC, conserved hypothetical protein
MGEISITKLLVVAALVVLLFGTKKLRTLGGDLGAAIKGFKKAMNDDDAAA
KKGADVDLQAEKLSHKE
>SSO_0670 ybgD, putative fimbrial-like protein
MFKGQKTLAALAVSLLFTAPVYAADEGSGEIHFKGEVIEAPCEIHQDDID
KEVELGQVTTSHINQSHHSDAVAVDLRLVNCDLENSSNGSGGKISKVAVT
FDSSAKTTGADPILNNTSTGEATGVGVRLMNKDQSNIVLGTATPDIDLAP
TSSEQTLNFFAWMEQIDQATPVTPGAVTANATYVLDYK
>SSO_0668 ybgP, putative chaperone
MTFMKGLPLLLLVASLCSHAALQPDRTRIVFNANDKATSLRVDNRSDKLP
YLAYSWLENEKGEKSDDLLVALPPIQRLEPKATTQVRIVKQASTTKLPGD
RETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALRKKAGEKV
ELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVLPGFKTVMVAPFSTV
NTNTGNYSGSQFYLGYMDDYGALRMTTLNCSGQCHLQAVEAKK
>SSO_0948 ycbF, putative chaperone
MPARHLYFIMTNTWNRLALLIFAVLSLLVAGELRAGVVVGGTRFIFPADR
ESISILLTNTSQESWLINSKINRPTRWAGGEASTVPAPLLAAPPLILLKP
GTTGTLRLLRTESDILPVDRETLFELSIASVPSGKVENQSVKVAMRSVFK
LFWRPEGLPGDPLEAYQQLRWTRNSQGVQLTNPTPYYINLIQVSVNGKAL
SNAGVVPPKSQRQTSWCQAIAPCHVAWRAINDYGGLSAKKEQNLP
>SSO_0942 ycbQ, putative fimbrial-like protein
MMTMKKSVLTAFITVVCATSSVMAADDNAITDGKVTFNGKVIAPACTLVA
ATKDSVVTLPNVSATKLQTNGAVSGVKTDVPIALEGCDVTVTKNATFTFS
GTADGVQPTAFANQATTDAATNVALQMYLPDGSTSVTPGTETSNIQLADS
AEQTVTFKVDYIATGKATSGNVNAVTNFHINYY
>SSO_0943 ycbR, putative chaperone
MKTCITKGIVTVSLTAILLSCSSAWAAGKGGIGLAATRLVYSEGEEQISL
GVRNTSPDVPYLIQSWVMTPDNKKSADFIITPPLFVLNPANENLLRIMYI
GAPLAKDRETLFFTSVRAVPSTTKREEGNTLKIATQSVIKLFWRPKGLAY
PLGEAPAKLRCTSSADMVTVSNPTPYFITLTDLKIGGKVVKNQMISPFDK
YQFSLPKGAKNSSVTYRTINDYGAETPQLNCKS
>SSO_1938 ychE, putative channel protein
MIQTFFDFPVYFKFFIGLFALVNPVGIIPVFISMTSYQTAAARNKTNLTA
NLSVAIILWISLFLGDTILQLFGISIDSFRIAGGILVVTIAMSMISGKLG
EDKQNKQEKSETAVRESIGVVPLALPLMAGPGAISSTIVWGTRYHSISYL
FGFFVAIALFALCCWGLFRMAPWLVRVLRQTGINVITRIMGLLLMALGIE
FIVTGIKGIFPGLLN
>SSO_1599 ydeB, conserved hypothetical protein
MLDLFKAIGLGLVVLLPLANPLTTVALFLGLAGNMNSAERNRQSLMASVY
VFAIMMVAYYAGQLVMDTFGISIPGLRIAGGLIVAFIGFRMLFPQQKAID
SPEAKSKSEELEDEPSANIAFVPLAMPSTAGPGTIAMIISSASTVRQSST
FADWVLMVAPPLIFFLVAVILWGSLRSSGAIMRLVGKGGIEAISRLMGFL
LVCMGVQFIINGILEIIKTYH
>SSO_1611 ydeK, conserved hypothetical protein
MQDQDSVITVRRLYNGYFGNGTVNISNNGLINNKEYSLVGVQDGSHGVVN
VTDKGHWSFLGTGEAFRYIYIGDAGDGELNVSREGKVDSGIITAGMKETG
TGNITVKDKNSVITNLGTNLGYDGHGEMNISNEGLVVSNGGSSLGYGENG
VGNVSITTGGMWEVNKNVYTTIGVAGVGNLNISDGGKFVSQNITFLGDKA
SGIGTLNLMDATSSFDTVGINVGNFGSGIVNVSNGATLNSTGYGFIGGNA
SGKGIVNISTDSLWNLKTSSTNAQLLQVGVLGTGELNITTGGIVKARDTQ
IALNDKSKGDVRVDGQNSLLETFNMYVGTSGTGTLTLTNSGTLNVEGGEV
YLGVFEPAVGTLNIGAAHGEAAADAGYITNATKVEFGSGEGVFVFNHTNN
SDAGYQVDMLITGDDKDGKVIHDAGHTVFNAGNTYSGKTLVNDGLLTIAS
HTADGVTGMGSSEVTIASPGTLDILASTNSAGDYTLTNALKGDGLMRVQL
SSYDKMFGFTHATGTEFAGVAQLKDRTFTLERDNTAALTHAMLQSDSENT
TSVNVGEQSIGGLAMNGGTLIFDTDIPAATLAEGYISVDTLVVGAGDYTW
KGRNYQVNGTGDVLIDVPKPWNDPIANNPLTTLNLLEHDDSHVGVQLVKA
QTVIGSGGSLTLRDLQGDEVEADKTLHIAQNGTVVAEGDYGFRLTTAPGD
GLYVNYGLKALNIHGGQKLTLAEHGGAYGATADMSAK
>SSO_2159 yehC, putative chaperone
MAAIPWRPFNLRGIKMKGLLSLLIFSMVLPAHAGIVIYGTRIIYPAENKE
VMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIGANSGQ
QVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLF
YRPAGIAPVNKATFKKLLVNRSGNGLVIKNDSANWVTISDVKANNVKVNY
ETIMIAPLESQSVNVKSNNANNWHLTIIDDHGNYISDKI
>SSO_2160 yehD, putative fimbrial-like protein
MKRSIIAAAVFSSFFMSAGVFAADVDTGTLTIKGNIAESPCKFEAGGDSV
SINMPTVPTTVFEGKAKYSTYDDAVGVTSSMLKISCPKEVAGVKLSLITN
DKITGNDKAIASSNDTVGYYLYLGDNSDVLDVSAPFNIESYKTAEGQYAI
PFKAKYLKLTDNSVQSGDVLSSLVMRVAQD
>SSO_2393 yfcS, putative chaperone
MIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKISSPLTVLPPVQRI
DSMMNGQVKVQGMPDINKLPADRESLFYFNVREIPPKSNKANTLQIALQT
RIKLFWRPKALENVSMKNPWQYKVTLTRNGQEFTVNNPTPYYVIFSNAST
QKNGNPAAGFSPIVMSPKTSAPLNVKMGSVPVLTYVNDYGARMPLFFTCN
GNSCQVDEEQSRKG
>SSO_2394 yfcU, PapC-like porin protein
MPDHSLFRLRILPWCIALAMSGSYSSVWAEDDIQFDSRFLELKGDTKIDL
KRFSSQGYVEPGKYNLQVQLNKQPLAEEYDIYWYAGEDDASKSYACLTPE
LVAQFGLKEDVAKNLQWSHDAKCLKSGQLEGMEIKADLSQSALVISLPQA
YLEYTYPDWDPPSRWDDGISGIVADYSINAQTRHEENGGDDSNEISGNGT
VGVNLGPWRMRADWQTNYQHTRSNDDDEFSGDETQKKWEWSRYYAWRALP
SLKAKLALGEDYLRSDIFDGFNYVGGSVSTDDQMLPPNLRGYAPDISGVA
HTTAKVTVSQMGRVIYETQVPAGPFRIQDLGDSVSGTLHIRIEEQNGQVQ
EYDISTASMPYLTRPGQVRYKIMMGRPQEWGHHVEGEFFSGAEASWGIAN
GWSLYGGALGDENYQSAALGVGRDLSTFGAVAFDVTHSHTKLDKDTAYGK
GSLDGNSFRVSYSKDFDQLNSRVTFAGYRFSEENFMTMSEYLDASDSGMV
RTGNDKEMYTATYNQNFRDAGVSVYLNYTRHTYWDREEQTNYNIMLSHYF
NIGSIRNVSISMTGYRYEYDNQADKGMYISLSMPWGDNSTVSYNGNYGSG
TDSSQVGYFSRVDDATHYQLNVGTSDKHTSVDGYYSHDGSLAQVDLSANY
HEGQYTSAGLSLQGGATLTAHGGALHRTQNMGGTRLLIDADGVADVPVEG
NGAAVYTNMFGKAVVSDVNNYYRNQAYIDLNKLPENAEATQSVVQATLTE
GAIGYRKFAVISGQKAMAVLRLQDGSHPPFGAEVKNDNEQTVGLVDDDGN
VYLAGVKPGEHMSVFWSGVAHCDINLPDPLPADLFNGLLLPCQHKGNVAP
VVPDDIKPVIQEQTQQVTPTNPPVSVSANQ
>SSO_3105 yggR, putative protein transport
MPGYAQYRSFSEDLSMNMEEIVALSVKHNVSDLHLCSAWPARWRIRGLME
AAPFEAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQ
RHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSSKST
TLAAMVGYLNQHADAHILTLEDPVEYIYASQRCLIQKREIGLHCMTFASG
LRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVE
RLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPA
VGNLIREGKTHQLPHVIQTGQQVGMITFQQSFQQRVGEGRL
>SSO_3180 ygiL, putative fimbrial-like protein
MSAFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDL
TVNLGEVADTVLKSDQKSLAEPFTIHLQDCMLSQGGTTYSKAKVTFTTAN
TMTGQTDLLKNTKETEIGGATGVGVRILDSQSGEVTLGTPVVITFNNTNS
YQELNFKARMESPGKDATPGNVYAQADYKIAYE
>SSO_3674 yhgN, conserved hypothetical protein
MNAIISAAVLLILIMDPLGNLPIFMSVLKHTEPKRRRAIMVRELLIALLV
MLVFLFAGEKILAFLSLRAETVSISGGIILFLIAIKMIFPSASGNSSGLP
AGEEPFIVPLAIPLVAGPTILATLMLLSHQYPNQMGHLVIALLLAWGGTF
VILLQSSLFLRLLGEKGVNALERLMGLILVMMATQMFLDGIRMWMKG
>SSO_3656 yidC, 60 kDa inner-membrane protein
MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAAGSAADQ
GVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLL
ETSPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVP
MTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEISTFGQLKQSI
TLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNISSKG
GWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAAIGYKSQPVLVQPGQT
GAMNSTLWVGPEIQDKMAAVAPHLDLTVDYGWLWFISQPLFKLLKWIHSF
VGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDD
KQRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAP
FALWIHDLSAQDPYYILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPV
IFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYRGLEKRGLHSREKKKS
>SSO_4013 yigU, conserved hypothetical protein
MSVEDTQPLITHLIELRKRLLNCIIAVIVIFLCLVYFANDIYHLVSAPLI
KQLPQGSTMIATDVASPFFTPIKLTFMVSLILSAPVILYQVWAFIAPALY
KHERRLVVPLLVSSSLLFYIGMAFAYFVVFPLAFGFLANTAPEGVQVSTD
IASYLSFVMALFMAFGVSFEVPVAIVLLCWMGITSPEDLRKKRPYVLVGA
FVVGMLLTPPDVFSQTLLAIPMYCLFEIGVFFSRFYVGKGRNREEENDAE
AESEKTEE
>SSO_4083 yiiO, Uncharacterized periplasmic protein
MMRIVTAAVMASTLAVSSLSHAAEVGSGDNWHPGEELTQRSTQSHMFDGI
SLTEHQRQQMRDLMQQARHEQPPVNVSELETMHRLVTAENFDENAVRAQA
EKMANEQIARQVEMAKVRNQMYRLLTPEQQAVLNEKHQQRMEQLRDVTQW
QKSSSLKLLSSSNSRSQ
>SSO_4175 yjaI, conserved hypothetical protein
MSKNDSLPAAGESFLLVYHARLPVISAFHRWHGRCNTRSKTTTGGLTMKR
NTKIALVMMALSAMAMGSTSAFAHGGHGMWQQNAAPLTSEQQTAWQKIHN
DFYAQSSALQQQLVTKRYEYNALLAANPPDSSKINAVAKEMENLRQSLDE
LRVKRDIAMAEAGIPRGAGMGMGYGGCGGGGHMGMGHW
>SSO_4261 yjcP, putative enzyme
MINRQLSRLLLCSILGSTTLISGCALVRKDSAPHQQLKPEQIKLADDIHL
ASSGWPQAQWWKQLNDPQLDALIQRTLSGSHTLAEAKLREEKAQSQADLL
DAGSQLQVAALGMLNRQRVSANGFLSPYAMDAPALGMDGPYYTEATVGLF
AGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLTTGVAQLYYSMQAS
YQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIA
AVKGQITETRESLRALIGAGASDMPEIKPVALPRVQTGIPATLSYELLAR
RPDLQAMRWYVQASLDQVDSARALFYPSFDIKAFFGLDAIHLDTLFKKTS
RQFNFIPGLKLPLFDGGRLNANLEGTRAASNMMIERYNQSVLNAVRDVAV
NGTRLQTLNDEREMQAERVEATRFTQRAAEAAYQRGLTSRLQATEARLPV
LAEEMSLLMLDSRRVIQSIQLMKSLGGGYQAAPVVEKK
>SSO_0523 ylcB, putative resistance protein
MSPCKLLPFCVALALTGCSLAPDYQRTAMPVPQQFSLSQNGLVNAADNYQ
NVGWRTFFVDNQVKTLISEALVNNRDLRMATLKVQEARAQYRLTDADRYP
QLNGEGSGSWSGNLKGNTATTREFSTGLNASFDLDFFGRLKNMSEAERQN
YLATEEAQRAVHILLVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFV
EKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLGSYG
KLPQAQTVNSGSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAA
RAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQA
NLDIAEIRQQQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLAS
LQITLQRARALYQHGAVSYLEVLDAERSLFATRQTLLDLNYARQVNEISL
YTALGGGWQQ
>SSO_2195 yohG, putative channel/filament proteins
MQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSAEGLMGPFALND
PAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQT
RQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSS
VEGVETDINASKTRQQLNDVAGKMKIIEARLSALTNNQTKSLKLKPVALP
KVASQLPDELGYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMA
FLQQDALHLSDLFRHSAQQMGVTAGLTLPIFDSGRLNANLNIAKAESNLS
IASYNKAVVEAVNDVARAASQVQTLAEKNQHQAQIERDALRVVGLAQARF
NAGIIVGSRVSEARIPALRERANGLLLQGQWLDASIQLTGALGGGYKR
>SSO_3183 yqiH, putative membrane protein
MKLMRYLNTKNLIAAGVLLACMSSIAWGAIIPDRTRIIMNESDKGEALKL
TNQSKNLPYLAQTWIEDTKGNKSRDFIVTVPPMVRLNPSEQIQIRMISQE
KIAQLPNDRETLFYFNVREIPPKTDKKNVMQVTMQHALKLFWRPKAIELE
DDGVMSYEKVEIIRRNDGSIRFNNKMPYHVTLGYIGTNGITMLPQTQSLM
VTPYSHADTQFKNVPSAFQVGYINDFGGLSFYEINCPTVNNSCNVSVAKR
DK
>SSO_3289 yraJ, putative outer membrane protein
MPQRHHQGHKRTPKQLALIIKRCLPMVLTGSGMLCTTANAEEYYFDPIML
ETTKSGMQTTDLSRFSKKYAQLPGTYQVDIWLNKKKVSQKKITFTANAEQ
LLQPQFTVEQLRELGIKVDEIPALAEKDDDSVINSLEQIIPGTAAEFDFN
HQRLNLSIPQIALYRDARGYVSPSRWDDGIPTLFTNYSFTGSDNRYRQGN
RSQRQYLNMQNGANFGPWRLRNYSTWTRNDQTSSWNTISSYLQRDIKALK
SQLLLGESATSGSIFSSYTFTGVQLASDDNMLPNSQRGFAPTVRGIANSS
AIVTIRQNGYVIYQSNVPAGAFEINDLYPSSNSGDLEVTIEESDGTQRRF
IQPYSSLPMMQRPGHLKYSATAGRYRADANSDSKEPEFAEATAIYGLNNT
FTLYGGLLGSEDYYALGIGIGGTLGALGALSMDINRADTQFDNQHSFHGY
QWRTQYIKDIPETNTNIAVSYYRYTNDGYFSFDEANTRNWNYNSRQKSEI
QFNISQTIFDGVSLYASGSQQDYWGNNDKNRNISVGVSGQQWGIGYSLNY
QYSRYTDQNNDRALSLNLSIPLERWLPRSRVSYQMTSQKDRPTQHEMRLN
GSLLDDGRLSYSLEQSLDDDNNHNSSLNASYRSPYGTFSAGYSYGNDSSQ
YNYGVTGGVVIHTHGVTLSQYLGNAFALIDANGASGVRIQNYPGIATDPF
GYAVVPYLTTYQENRLSVDTTQLPDNVDLEQTTQFVVPNRGAMVAARFNA
NIGYRVLVIVSDRNGKPLPFGALASNDETGQQSIVDEGGILYLSGISSKS
QSWTVRWGNQADQQCQFAFSTPDSEPTTSVLQGTAQCH
>SSO_3291 yraK, putative fimbrial protein
MSGNIGANPFTSATLSSTNWQYACSCSAGKAVKLVYMVSPVLTTTGHQTG
YYKLNDSLDIKTTLQANDIPGLTTDQVVSVNTRFTQIKSSTVYSAATQTG
VCQGDTSRYGPVNIGANTTFTLYVTKPFLGSMTIPKTDIAVIKGAWVDGM
GSPSTGDFHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQKFTTRN
AMPDGFTPVDFDITYDCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSS
DNVPDVGIRIENLGGGVANIPFQNGILPVDPSGHGTVNMRAWPVNLVGGE
LETGKFQGTATITVMVR
>SSO_4400 ytfI, conserved hypothetical protein
MLPRIRHNNFIGAVELFVKSSYTKTHSNNFFNNIQHAFKKKDWISNYDSL
LTLREFFRCATQIDKNSYQVLSSKNGTVNAMDKFLISFSLKDNGAEYTMT
LRGSGFEYEEIPITINEYNSFMDFKNREFPLEQNRRLYACDILQKKQSDI
PKRIKGYIHQAIGDVSLGYALLEDIVSKLKRGKFELQIPGGGIKECDGWY
IHEKIIDDNFAIVIESLGFALKIYGGDERFRNGSSVVLEDEDYSLIYNFL
VNAGCQQVELAEQVDAIVSANLAADSNITKEKICKKYKSTIEAFKKEQLA
LPV