TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-04-30 04:23:32

Gene list

Applied filters:

COG category: Intracellular trafficking and secretion
Organism: Shigella dysenteriae Sd197, Sd197

Number of genes found: 91

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella dysenteriae Sd197, Sd197
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SDY_2532 putative fimbrial-like proteinchromosome CDS2330258 540 - 0.5
NA SDY_1891 possible enzymechromosome CDS1725931 1257 - 0.515513
NA SDY_0428 hypothetical proteinchromosome CDS416643 294 - 0.465986
NA SDY_0497 hypothetical proteinchromosome CDS483003 993 + 0.466264
NA SDY_1374 putative outer membrane channel proteinchromosome CDS1270947 828 + 0.536232
NA SDY_2533 conserved hypothetical proteinchromosome CDS2330794 489 - 0.494888
NA SDY_2426 hypothetical proteinchromosome CDS2226292 654 - 0.503058
NA SDY_2536 hypothetical proteinchromosome CDS2332573 600 - 0.565
NA SDY_4570 hypothetical proteinchromosome CDS4285579 1212 - 0.509901
NA SDY_3907 conserved hypothetical proteinchromosome CDS3638059 312 - 0.448718
NA SDY_0915 putative fimbrial-like proteinchromosome CDS864263 510 + 0.478431
NA SDY_0912 hypothetical proteinchromosome CDS861552 834 + 0.496403
NA SDY_0424 hypothetical proteinchromosome CDS411486 1494 - 0.600402
NA SDY_4035 hypothetical proteinchromosome CDS3771929 837 + 0.51374
NA SDY_2537 putative fimbrial usherchromosome CDS2333151 1731 - 0.553437
NA SDY_0916 putative fimbrial-like proteinchromosome CDS864732 564 + 0.47695
NA SDY_0151 hypothetical proteinchromosome CDS152152 492 - 0.424797
NA SDY_4033 hypothetical proteinchromosome CDS3767585 1200 + 0.501667
NA SDY_1077 hypothetical proteinchromosome CDS1008318 534 + 0.477528
NA SDY_0425 conserved hypothetical proteinchromosome CDS412889 2877 - 0.575947
NA SDY_4034 hypothetical proteinchromosome CDS3769333 2508 + 0.524721
NA SDY_1202 hypothetical proteinchromosome CDS1111815 1020 + 0.464706
NA SDY_0429 hypothetical proteinchromosome CDS416946 621 - 0.555556
NA SDY_3581 putative DNA processing proteinchromosome CDS3320562 1296 - 0.505401
NA SDY_3906 conserved hypothetical proteinchromosome CDS3637540 438 - 0.557078
NA SDY_0498 hypothetical proteinchromosome CDS484134 684 + 0.502924
NA SDY_0422 hypothetical proteinchromosome CDS403103 4398 - 0.617326
NA SDY_1373 hypothetical proteinchromosome CDS1270401 498 + 0.546185
NA SDY_0423 hypothetical proteinchromosome CDS407525 3948 - 0.60613
ccmD SDY_0880 heme exporter protein Cchromosome CDS828374 210 + 0.561905
clpP SDY_0295 ATP-dependent proteolytic subunit of clpA-clpP serine proteasechromosome CDS288947 624 - 0.508013
exbB SDY_3067 ExbBchromosome CDS2845226 735 + 0.530612
exbD SDY_3068 ExbDchromosome CDS2845967 426 + 0.49061
ffh SDY_2784 GTP-binding export factorchromosome CDS2577946 1362 - 0.538913
fliS SDY_1090 repressor of class 3a and 3b operonschromosome CDS1017681 411 - 0.498783
ftsY SDY_3615 cell division membrane proteinchromosome CDS3351435 1497 - 0.529726
gspC SDY_3092 putative general secretion protein GspCchromosome CDS2867995 831 + 0.519856
gspD SDY_3093 putative type II secretion proteinchromosome CDS2869065 1836 + 0.559368
gspE SDY_3094 putative type II secretion proteinchromosome CDS2870900 1494 + 0.586345
gspF SDY_3095 putative type II secretion proteinchromosome CDS2872393 1200 + 0.589167
gspG SDY_3096 putative type II secretion proteinchromosome CDS2873633 456 + 0.517544
gspH SDY_3097 putative type II secretion proteinchromosome CDS2874125 531 + 0.551789
gspI SDY_3098 putative type II secretion proteinchromosome CDS2874652 372 + 0.569892
gspJ SDY_3099 putative type II secretion proteinchromosome CDS2875056 570 + 0.575439
gspK SDY_3100 putative type II secretion proteinchromosome CDS2875622 978 + 0.55317
gspL SDY_3101 putative general secretion pathway for protein export (GSP)chromosome CDS2876914 861 + 0.567944
gspM SDY_3102 putative secretion pathway proteinchromosome CDS2877890 423 + 0.539007
hofB SDY_0137 HofBchromosome CDS136297 1335 - 0.539326
lepB SDY_2809 leader peptidasechromosome CDS2599176 975 - 0.518974
lspA SDY_0049 prolipoprotein signal peptidasechromosome CDS43996 495 + 0.529293
nfrB SDY_0266 bacteriophage N4 receptorchromosome CDS260895 1965 - 0.533842
ppdA SDY_3043 prepilin peptidase dependent protein Achromosome CDS2820335 471 - 0.541401
ppdB SDY_3042 prepilin peptidase dependent protein Bchromosome CDS2819781 564 - 0.52305
ppdD SDY_0138 prelipin peptidase dependent proteinchromosome CDS137641 441 - 0.52381
prlA SDY_3476 putative ATPase subunit of translocasechromosome CDS3225204 1332 - 0.496246
secA SDY_0128 preprotein translocasechromosome CDS128932 2706 + 0.521434
secB SDY_4042 SecBchromosome CDS3779442 468 - 0.508547
secD SDY_0326 SecDchromosome CDS314415 1848 - 0.531385
secE SDY_3747 preprotein translocasechromosome CDS3480927 384 - 0.554688
secF SDY_0325 protein secretion, membrane proteinchromosome CDS313433 972 - 0.514403
secG SDY_3356 protein export-membrane proteinchromosome CDS3113578 333 - 0.498498
sfmC SDY_0256 putative chaperonechromosome CDS253042 366 + 0.434426
smf SDY_3462 predicted Rossmann-fold nucleotide-binding proteinchromosome CDS3214872 1125 - 0.511111
sohB SDY_1342 putative proteasechromosome CDS1239881 1041 + 0.49952
sppA SDY_1507 protease IVchromosome CDS1378879 1857 - 0.519655
spy SDY_1534 Spychromosome CDS1406110 486 + 0.506173
tolB SDY_0688 periplasmic proteinchromosome CDS650368 1293 + 0.53519
tolC SDY_3205 outer membrane channelchromosome CDS2967943 1488 - 0.513441
tolQ SDY_0685 inner membrane proteinchromosome CDS647781 693 + 0.502164
tolR SDY_0686 putative inner membrane proteinchromosome CDS648477 429 + 0.515152
yajC SDY_0327 conserved hypothetical proteinchromosome CDS316290 333 - 0.495495
ybbJ SDY_0411 conserved hypothetical proteinchromosome CDS394660 459 + 0.586057
ybeC SDY_0549 conserved hypothetical proteinchromosome CDS531613 204 + 0.490196
ybgD SDY_0655 putative fimbrial-like proteinchromosome CDS618980 567 - 0.455026
ybgP SDY_0652 putative chaperonechromosome CDS614951 696 - 0.521552
ycbF SDY_0917 putative chaperonechromosome CDS865261 738 + 0.512195
ydeB SDY_1598 conserved hypothetical proteinchromosome CDS1460589 666 + 0.5
yehB SDY_2287 putative outer membrane proteinchromosome CDS2077541 1794 - 0.458751
yejO SDY_0889 putative ATP-binding component of a transport systemchromosome CDS835867 2055 + 0.492457
yfaL SDY_2425 putative ATP-binding component of a transport systemchromosome CDS2223994 2163 - 0.54184
yfcS SDY_2535 putative chaperonechromosome CDS2331801 750 - 0.52
yggR SDY_3121 putative protein transportchromosome CDS2894543 1026 + 0.549708
yhgN SDY_3580 conserved hypothetical proteinchromosome CDS3319923 594 + 0.501683
yidC SDY_4188 60 KD inner-membrane proteinchromosome CDS3920955 1647 + 0.536733
yigU SDY_3905 conserved hypothetical proteinchromosome CDS3636761 777 - 0.516088
yiiO SDY_3833 Uncharacterized periplasmic proteinchromosome CDS3565926 504 - 0.501984
yjaI SDY_3724 conserved hypothetical proteinchromosome CDS3456081 561 + 0.511586
yohG SDY_2150 putative channel/filament proteinschromosome CDS1948211 921 + 0.537459
yohH SDY_2149 conserved hypothetical proteinchromosome CDS1947773 345 + 0.492754
ypjA SDY_1204 putative ATP-binding component of a transport systemchromosome CDS1113426 2595 + 0.522158
yraK SDY_3324 putative fimbrial proteinchromosome CDS3082053 1092 + 0.477106