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2024-05-19 06:04:25

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Xanthomonas oryzae pv. oryzae KACC10331, KACC10331

Number of genes found: 97

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Xanthomonas oryzae pv. oryzae KACC10331, KACC10331
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA XOO1793 conserved hypothetical proteinSubName: Full=Membrane protein implicated in regulation of membrane protease activity; chromosome CDS1886207 579 + 0.663212
NA XOO4280 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4555310 801 - 0.649189
NA XOO2036 outer membrane component of multidrug efflux pump chromosome CDS2137919 927 - 0.656958
NA XOO3205 conserved hypothetical proteinSubName: Full=Multiple antibiotic transporter; chromosome CDS3444980 663 - 0.644042
NA XOO4636 60 kDa inner-membrane proteinRecName: Full=Membrane protein insertase YidC; AltName: Full=Foldase YidC; AltName: Full=Membrane integrase YidC; AltName: Full=Membrane protein YidC; chromosome CDS4938875 1725 - 0.64
NA XOO0409 conserved hypothetical proteinSubName: Full=Periplasmic component of the Tol biopolymer transport system; chromosome CDS416407 909 - 0.682068
NA XOO3200 conserved hypothetical proteinSubName: Full=Tfp pilus assembly protein PilW; chromosome CDS3437218 1167 - 0.599829
NA XOO1978 pili assembly chaperoneSubName: Full=P pilus assembly protein, chaperone PapD; chromosome CDS2079289 732 - 0.672131
NA XOO3258 FimVSubName: Full=Tfp pilus assembly protein FimV; chromosome CDS3494189 1986 - 0.693353
NA XOO0948 conserved hypothetical proteinSubName: Full=DNA-binding winged-HTH domains; chromosome CDS979063 2403 + 0.646692
NA XOO2160 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2265279 438 + 0.625571
NA XOO3079 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3311517 504 - 0.650794
acvB XOO2738 virulence proteinSubName: Full=Virulence protein; chromosome CDS2901548 1263 - 0.650831
clpP XOO1033 ATP-dependent Clp protease proteolytic subunitRecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; chromosome CDS1049468 627 + 0.60925
czcA XOO2377 cation efflux system proteinSubName: Full=Cation efflux system protein; chromosome CDS2523399 4575 + 0.646995
ecpD XOO1981 pili assembly chaperoneSubName: Full=Pili assembly chaperone; chromosome CDS2083795 783 - 0.655172
exbB XOO0009 biopolymer transport ExbB proteinSubName: Full=Biopolymer transport ExbB protein; chromosome CDS11946 762 + 0.641732
exbB XOO2299 biopolymer transport proteinSubName: Full=Biopolymer transport protein; chromosome CDS2434891 741 - 0.643725
exbD XOO2298 biopolymer transport proteinSubName: Full=Biopolymer transport protein; chromosome CDS2434423 465 - 0.636559
exbD1 XOO0010 biopolymer transport ExbD1 proteinSubName: Full=Biopolymer transport ExbD1 protein; chromosome CDS12754 423 + 0.593381
exbD2 XOO0011 biopolymer transport ExbD2 proteinSubName: Full=Biopolymer transport ExbD2 protein; chromosome CDS13180 414 + 0.601449
fasD XOO1980 outer membrane usher protein FasDSubName: Full=Outer membrane usher protein FasD; chromosome CDS2081427 2352 - 0.66199
ffh XOO1321 signal recognition particle proteinRecName: Full=Signal recognition particle protein; AltName: Full=Fifty-four homolog; chromosome CDS1347601 1485 + 0.651178
fimT XOO3202 pre-pilin like leader sequenceSubName: Full=Fimbrial biogenesis protein; chromosome CDS3438851 516 - 0.624031
fimT XOO3194 fimbrial biogenesis proteinSubName: Full=Fimbrial biogenesis protein; chromosome CDS3429342 543 + 0.596685
flgM XOO2566 flagellar proteinSubName: Full=Flagellar protein; chromosome CDS2718824 312 - 0.625
flhA XOO2618 flagellar proteinSubName: Full=Flagellar protein; chromosome CDS2775660 2094 + 0.672397
flhB XOO2617 flagellar biosynthetic protein FlhBSubName: Full=Flagellar biosynthetic protein FlhB; chromosome CDS2774662 1002 + 0.641717
fliE XOO2600 flagellar proteinSubName: Full=Flagellar protein; chromosome CDS2753791 516 + 0.670543
fliF XOO2601 flagellar proteinRecName: Full=Flagellar M-ring protein; chromosome CDS2754320 1725 + 0.658551
fliH XOO2603 flagellar proteinSubName: Full=Flagellar protein; chromosome CDS2757041 597 + 0.693467
fliI XOO2604 flagellar proteinSubName: Full=Flagellar protein; chromosome CDS2757634 1377 + 0.700799
fliJ XOO2605 flagellar FliJ proteinSubName: Full=Flagellar FliJ protein; chromosome CDS2759014 456 + 0.638158
fliN XOO2609 flagellar proteinSubName: Full=Flagellar protein; chromosome CDS2762510 339 + 0.637168
fliP XOO2611 flagellar biosynthetic proteinSubName: Full=Flagellar biosynthetic protein; chromosome CDS2763263 846 + 0.646572
fliQ XOO2612 flagellar biosynthesisSubName: Full=Flagellar biosynthesis; chromosome CDS2764526 270 + 0.614815
fliR XOO2613 flagellar biosynthetic proteinRecName: Full=Flagellar biosynthetic protein fliR; chromosome CDS2764808 792 + 0.657828
fliS XOO2583 flagellar proteinSubName: Full=Flagellar protein; chromosome CDS2735895 414 + 0.620773
ftsY XOO3143 cell division proteinRecName: Full=Signal recognition particle receptor FtsY; Short=SRP receptor; chromosome CDS3378399 1806 + 0.67608
gspE XOO4400 general secretory pathway related proteinSubName: Full=General secretory pathway related protein; chromosome CDS4678554 1815 + 0.67438
hrcC XOO0094 HrcCSubName: Full=Type II secretory pathway, component PulD; chromosome CDS86537 1818 + 0.625413
hrcN XOO0091 HrcNSubName: Full=HrcN protein; chromosome CDS83797 1329 + 0.65538
hrcQ XOO0082 hrpD1SubName: Full=Flagellar motor switch/type III secretory pathway protein; chromosome CDS75928 1005 - 0.638806
hrcR XOO0081 hrpD2SubName: Full=HrpD2; chromosome CDS75297 681 - 0.587372
hrcS XOO0080 HrcSSubName: Full=Type III secretory pathway, component EscS; chromosome CDS75032 261 - 0.624521
hrcU XOO0085 HrcUSubName: Full=HrcU; chromosome CDS79546 1272 - 0.59434
hrcV XOO0084 HrcVSubName: Full=HrcV protein; chromosome CDS77615 1938 - 0.615067
hrpB3 XOO0088 HrpB3SubName: Full=HrpB3; chromosome CDS81723 762 + 0.614173
hrpB5 XOO0090 HrpB5SubName: Full=HrpB5; chromosome CDS83106 702 + 0.688034
hrpB8 XOO0093 HrpB8SubName: Full=HrpB8; chromosome CDS85624 831 + 0.614922
lepB XOO1853 signal peptidase ISubName: Full=Signal peptidase I; chromosome CDS1956355 801 + 0.588015
lspA XOO1627 lipoprotein signal peptidaseRecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; Short=SPase II; chromosome CDS1674826 621 + 0.634461
oprN XOO2778 outer membrane protein OprN precursorSubName: Full=Outer membrane protein OprN; chromosome CDS2941302 1512 - 0.683862
pilB XOO1589 pilus biogenesis proteinSubName: Full=Pilus biogenesis protein; chromosome CDS1628312 1788 + 0.610738
pilD XOO1584 type IV pre-pilin leader peptidaseRecName: Full=Type 4 prepilin-like proteins leader peptide-processing enzyme; EC=2.1.1.-; EC=3.4.23.43; chromosome CDS1621562 864 - 0.625
pilE XOO1586 pilinSubName: Full=Pilin; chromosome CDS1623965 507 + 0.589744
pilE1 XOO3195 type IV pilinSubName: Full=Type IV pilin; chromosome CDS3430063 456 - 0.600877
pilF XOO2533 fimbrial biogenesis proteinSubName: Full=Fimbrial biogenesis protein; chromosome CDS2675726 813 - 0.621156
pilM XOO1157 fimbrial assembly membrane proteinSubName: Full=Fimbrial assembly membrane protein; chromosome CDS1182649 1119 + 0.617516
pilN XOO1158 fimbrial assembly membrane proteinSubName: Full=Fimbrial assembly membrane protein; chromosome CDS1183767 759 + 0.628458
pilO XOO1159 fimbrial assembly membrane proteinSubName: Full=Fimbrial assembly membrane protein; chromosome CDS1184522 666 + 0.596096
pilP XOO1160 fimbrial assembly proteinSubName: Full=Fimbrial assembly protein; chromosome CDS1185184 534 + 0.644195
pilQ XOO1161 fimbrial assembly proteinSubName: Full=Fimbrial assembly protein; chromosome CDS1185665 2022 + 0.61276
pilT XOO1418 twitching motility proteinSubName: Full=Twitching motility protein; chromosome CDS1449100 1038 + 0.618497
pilU XOO1419 twitching motility proteinSubName: Full=Twitching motility protein; chromosome CDS1450200 1182 + 0.605753
pilY1 XOO3196 PilY1SubName: Full=PilY1 protein; chromosome CDS3430525 3525 - 0.550922
pilZ XOO0887 type IV fimbriae assembly proteinSubName: Full=Type IV fimbriae assembly protein; chromosome CDS912675 354 + 0.632768
secA XOO3818 preprotein translocase SecA subunitRecName: Full=Protein translocase subunit SecA; chromosome CDS4069813 2877 - 0.623914
secB XOO4197 protein-export proteinRecName: Full=Protein-export protein SecB; chromosome CDS4472652 516 + 0.637597
secD XOO2482 protein-export membrane proteinRecName: Full=Protein translocase subunit SecD; chromosome CDS2631342 1845 - 0.636314
secE XOO3598 translocase SecERecName: Full=Protein translocase subunit SecE; chromosome CDS3861391 411 - 0.554745
secF XOO2481 protein-export membrane proteinRecName: Full=Protein-export membrane protein SecF; chromosome CDS2630279 969 - 0.604747
secG XOO3237 protein-export membrane proteinSubName: Full=Protein-export membrane protein; chromosome CDS3476510 462 - 0.666667
secY XOO3562 preprotein translocase SecY subunitRecName: Full=Protein translocase subunit SecY; chromosome CDS3831941 1365 - 0.597802
smf XOO0583 DNA processing chain ASubName: Full=DNA processing chain A; chromosome CDS606135 1143 - 0.672791
sppA XOO0573 protease IVRecName: Full=Protease 4; EC=3.4.21.-; AltName: Full=Endopeptidase IV; AltName: Full=Protease IV; AltName: Full=Signal peptide peptidase; chromosome CDS595249 1929 + 0.65267
tatA XOO4408 sec-independent protein translocaseRecName: Full=Sec-independent protein translocase protein TatA; chromosome CDS4694298 228 - 0.640351
tatB XOO4407 sec-independent protein translocaseRecName: Full=Sec-independent protein translocase protein TatB; chromosome CDS4693635 648 - 0.675926
tatC XOO4406 sec-independent protein translocaseRecName: Full=Sec-independent protein translocase protein TatC; chromosome CDS4692883 756 - 0.628307
tolB XOO1668 TolBRecName: Full=Protein TolB; Flags: Precursor; chromosome CDS1731764 1386 + 0.647186
tolC XOO0927 TolCSubName: Full=TolC protein; chromosome CDS958679 1380 - 0.624638
tolQ XOO1665 TolQSubName: Full=TolQ protein; chromosome CDS1729155 780 + 0.634615
tolR XOO1666 TolRSubName: Full=Biopolymer transport protein; chromosome CDS1729959 582 + 0.640893
traH XOO0605 TraH proteinSubName: Full=TraH protein; chromosome CDS631471 1086 + 0.593923
ttgF XOO1560 outer membrane channel proteinSubName: Full=Outer membrane channel protein; chromosome CDS1591995 1572 + 0.657125
uptC XOO0773 type II secretion system protein-like proteinSubName: Full=Type II secretion system protein-like protein; chromosome CDS787588 1140 - 0.621053
xadA XOO0842 outer membrane proteinSubName: Full=Outer membrane protein; chromosome CDS862259 3798 + 0.672196
xpsD XOO0857 general secretion pathway protein DSubName: Full=General secretion pathway protein D; chromosome CDS877076 2313 + 0.624297
xpsE XOO0847 general secretion pathway protein ESubName: Full=General secretion pathway protein E; chromosome CDS868333 1683 + 0.622698
xpsF XOO0848 general secretion pathway protein FSubName: Full=General secretion pathway protein F; chromosome CDS870191 1218 + 0.638752
xpsG XOO0849 general secretion pathway protein GSubName: Full=General secretion pathway protein G; chromosome CDS871616 492 + 0.617886
xpsH XOO0850 general secretion pathway protein HSubName: Full=General secretion pathway protein H; chromosome CDS872117 510 + 0.682353
xpsJ XOO0852 general secretion pathway protein JSubName: Full=General secretion pathway protein J; chromosome CDS873036 636 + 0.641509
xpsK XOO0853 general secretion pathway protein KRecName: Full=Type II secretion system protein K; chromosome CDS873614 906 + 0.660044
xpsL XOO0854 general secretion pathway protein LSubName: Full=General secretion pathway protein L; chromosome CDS874492 1146 + 0.664049
yajC XOO2483 preprotein translocase YajC subunitSubName: Full=Preprotein translocase YajC subunit; chromosome CDS2633383 354 - 0.635593
yjcP XOO1999 outer membrane efflux proteinSubName: Full=Outer membrane efflux protein; chromosome CDS2105915 1518 + 0.685771