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2024-05-06 07:02:37

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Xanthomonas oryzae pv. oryzae KACC10331, KACC10331

Number of genes found: 97

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Xanthomonas oryzae pv. oryzae KACC10331, KACC10331
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA XOO2160 conserved hypothetical proteinchromosome CDS2265279 438 + 0.625571
NA XOO3079 conserved hypothetical proteinchromosome CDS3311517 504 - 0.650794
NA XOO1793 conserved hypothetical proteinchromosome CDS1886207 579 + 0.663212
NA XOO4636 60 kDa inner-membrane proteinchromosome CDS4938875 1725 - 0.64
NA XOO2036 outer membrane component of multidrug efflux pumpchromosome CDS2137919 927 - 0.656958
NA XOO0409 conserved hypothetical proteinchromosome CDS416407 909 - 0.682068
NA XOO0948 conserved hypothetical proteinchromosome CDS979063 2403 + 0.646692
NA XOO3258 FimVchromosome CDS3494189 1986 - 0.693353
NA XOO4280 conserved hypothetical proteinchromosome CDS4555310 801 - 0.649189
NA XOO3205 conserved hypothetical proteinchromosome CDS3444980 663 - 0.644042
NA XOO1978 pili assembly chaperonechromosome CDS2079289 732 - 0.672131
NA XOO3200 conserved hypothetical proteinchromosome CDS3437218 1167 - 0.599829
acvB XOO2738 virulence proteinchromosome CDS2901548 1263 - 0.650831
clpP XOO1033 ATP-dependent Clp protease proteolytic subunitchromosome CDS1049468 627 + 0.60925
czcA XOO2377 cation efflux system proteinchromosome CDS2523399 4575 + 0.646995
ecpD XOO1981 pili assembly chaperonechromosome CDS2083795 783 - 0.655172
exbB XOO2299 biopolymer transport proteinchromosome CDS2434891 741 - 0.643725
exbB XOO0009 biopolymer transport ExbB proteinchromosome CDS11946 762 + 0.641732
exbD XOO2298 biopolymer transport proteinchromosome CDS2434423 465 - 0.636559
exbD1 XOO0010 biopolymer transport ExbD1 proteinchromosome CDS12754 423 + 0.593381
exbD2 XOO0011 biopolymer transport ExbD2 proteinchromosome CDS13180 414 + 0.601449
fasD XOO1980 outer membrane usher protein FasDchromosome CDS2081427 2352 - 0.66199
ffh XOO1321 signal recognition particle proteinchromosome CDS1347601 1485 + 0.651178
fimT XOO3202 pre-pilin like leader sequencechromosome CDS3438851 516 - 0.624031
fimT XOO3194 fimbrial biogenesis proteinchromosome CDS3429342 543 + 0.596685
flgM XOO2566 flagellar proteinchromosome CDS2718824 312 - 0.625
flhA XOO2618 flagellar proteinchromosome CDS2775660 2094 + 0.672397
flhB XOO2617 flagellar biosynthetic protein FlhBchromosome CDS2774662 1002 + 0.641717
fliE XOO2600 flagellar proteinchromosome CDS2753791 516 + 0.670543
fliF XOO2601 flagellar proteinchromosome CDS2754320 1725 + 0.658551
fliH XOO2603 flagellar proteinchromosome CDS2757041 597 + 0.693467
fliI XOO2604 flagellar proteinchromosome CDS2757634 1377 + 0.700799
fliJ XOO2605 flagellar FliJ proteinchromosome CDS2759014 456 + 0.638158
fliN XOO2609 flagellar proteinchromosome CDS2762510 339 + 0.637168
fliP XOO2611 flagellar biosynthetic proteinchromosome CDS2763263 846 + 0.646572
fliQ XOO2612 flagellar biosynthesischromosome CDS2764526 270 + 0.614815
fliR XOO2613 flagellar biosynthetic proteinchromosome CDS2764808 792 + 0.657828
fliS XOO2583 flagellar proteinchromosome CDS2735895 414 + 0.620773
ftsY XOO3143 cell division proteinchromosome CDS3378399 1806 + 0.67608
gspE XOO4400 general secretory pathway related proteinchromosome CDS4678554 1815 + 0.67438
hrcC XOO0094 HrcCchromosome CDS86537 1818 + 0.625413
hrcN XOO0091 HrcNchromosome CDS83797 1329 + 0.65538
hrcQ XOO0082 hrpD1chromosome CDS75928 1005 - 0.638806
hrcR XOO0081 hrpD2chromosome CDS75297 681 - 0.587372
hrcS XOO0080 HrcSchromosome CDS75032 261 - 0.624521
hrcU XOO0085 HrcUchromosome CDS79546 1272 - 0.59434
hrcV XOO0084 HrcVchromosome CDS77615 1938 - 0.615067
hrpB3 XOO0088 HrpB3chromosome CDS81723 762 + 0.614173
hrpB5 XOO0090 HrpB5chromosome CDS83106 702 + 0.688034
hrpB8 XOO0093 HrpB8chromosome CDS85624 831 + 0.614922
lepB XOO1853 signal peptidase Ichromosome CDS1956355 801 + 0.588015
lspA XOO1627 lipoprotein signal peptidasechromosome CDS1674826 621 + 0.634461
oprN XOO2778 outer membrane protein OprN precursorchromosome CDS2941302 1512 - 0.683862
pilB XOO1589 pilus biogenesis proteinchromosome CDS1628312 1788 + 0.610738
pilD XOO1584 type IV pre-pilin leader peptidasechromosome CDS1621562 864 - 0.625
pilE XOO1586 pilinchromosome CDS1623965 507 + 0.589744
pilE1 XOO3195 type IV pilinchromosome CDS3430063 456 - 0.600877
pilF XOO2533 fimbrial biogenesis proteinchromosome CDS2675726 813 - 0.621156
pilM XOO1157 fimbrial assembly membrane proteinchromosome CDS1182649 1119 + 0.617516
pilN XOO1158 fimbrial assembly membrane proteinchromosome CDS1183767 759 + 0.628458
pilO XOO1159 fimbrial assembly membrane proteinchromosome CDS1184522 666 + 0.596096
pilP XOO1160 fimbrial assembly proteinchromosome CDS1185184 534 + 0.644195
pilQ XOO1161 fimbrial assembly proteinchromosome CDS1185665 2022 + 0.61276
pilT XOO1418 twitching motility proteinchromosome CDS1449100 1038 + 0.618497
pilU XOO1419 twitching motility proteinchromosome CDS1450200 1182 + 0.605753
pilY1 XOO3196 PilY1chromosome CDS3430525 3525 - 0.550922
pilZ XOO0887 type IV fimbriae assembly proteinchromosome CDS912675 354 + 0.632768
secA XOO3818 preprotein translocase SecA subunitchromosome CDS4069813 2877 - 0.623914
secB XOO4197 protein-export proteinchromosome CDS4472652 516 + 0.637597
secD XOO2482 protein-export membrane proteinchromosome CDS2631342 1845 - 0.636314
secE XOO3598 translocase SecEchromosome CDS3861391 411 - 0.554745
secF XOO2481 protein-export membrane proteinchromosome CDS2630279 969 - 0.604747
secG XOO3237 protein-export membrane proteinchromosome CDS3476510 462 - 0.666667
secY XOO3562 preprotein translocase SecY subunitchromosome CDS3831941 1365 - 0.597802
smf XOO0583 DNA processing chain Achromosome CDS606135 1143 - 0.672791
sppA XOO0573 protease IVchromosome CDS595249 1929 + 0.65267
tatA XOO4408 sec-independent protein translocasechromosome CDS4694298 228 - 0.640351
tatB XOO4407 sec-independent protein translocasechromosome CDS4693635 648 - 0.675926
tatC XOO4406 sec-independent protein translocasechromosome CDS4692883 756 - 0.628307
tolB XOO1668 TolBchromosome CDS1731764 1386 + 0.647186
tolC XOO0927 TolCchromosome CDS958679 1380 - 0.624638
tolQ XOO1665 TolQchromosome CDS1729155 780 + 0.634615
tolR XOO1666 TolRchromosome CDS1729959 582 + 0.640893
traH XOO0605 TraH proteinchromosome CDS631471 1086 + 0.593923
ttgF XOO1560 outer membrane channel proteinchromosome CDS1591995 1572 + 0.657125
uptC XOO0773 type II secretion system protein-like proteinchromosome CDS787588 1140 - 0.621053
xadA XOO0842 outer membrane proteinchromosome CDS862259 3798 + 0.672196
xpsD XOO0857 general secretion pathway protein Dchromosome CDS877076 2313 + 0.624297
xpsE XOO0847 general secretion pathway protein Echromosome CDS868333 1683 + 0.622698
xpsF XOO0848 general secretion pathway protein Fchromosome CDS870191 1218 + 0.638752
xpsG XOO0849 general secretion pathway protein Gchromosome CDS871616 492 + 0.617886
xpsH XOO0850 general secretion pathway protein Hchromosome CDS872117 510 + 0.682353
xpsJ XOO0852 general secretion pathway protein Jchromosome CDS873036 636 + 0.641509
xpsK XOO0853 general secretion pathway protein Kchromosome CDS873614 906 + 0.660044
xpsL XOO0854 general secretion pathway protein Lchromosome CDS874492 1146 + 0.664049
yajC XOO2483 preprotein translocase YajC subunitchromosome CDS2633383 354 - 0.635593
yjcP XOO1999 outer membrane efflux proteinchromosome CDS2105915 1518 + 0.685771