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2024-04-27 18:41:42

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Xanthomonas axonopodis pv. citri str. 306, 306

Number of genes found: 144

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Xanthomonas axonopodis pv. citri str. 306, 306
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
XAC0036 conserved hypothetical proteinchromosome CDS45728 345 - 0.669565
XAC0574 conserved hypothetical proteinchromosome CDS674800 1323 + 0.643235
XAC0692 conserved hypothetical proteinchromosome CDS819406 1521 + 0.652202
XAC0868 hypothetical proteinchromosome CDS1030414 810 - 0.488889
XAC1069 hypothetical proteinchromosome CDS1226193 723 - 0.590595
XAC1423 pili assembly chaperonechromosome CDS1638752 720 - 0.6875
XAC1526 outer membrane component of multidrug efflux pumpchromosome CDS1761852 1404 - 0.670228
XAC1816 hemagglutinin/hemolysin-related proteinchromosome CDS2106435 4293 + 0.614722
XAC1818 hemagglutininchromosome CDS2112265 738 + 0.636856
XAC2319 conserved hypothetical proteinchromosome CDS2713957 438 - 0.627854
XAC2659 hypothetical proteinchromosome CDS3118586 675 + 0.601481
XAC2674 conserved hypothetical proteinchromosome CDS3134265 600 - 0.655
XAC2722 FimV proteinchromosome CDS3181839 2094 - 0.701528
XAC2763 extracellular proteasechromosome CDS3235963 1098 + 0.653916
XAC3062 conserved hypothetical proteinchromosome CDS3584672 417 - 0.664269
XAC3131 hypothetical proteinchromosome CDS3682724 315 - 0.571429
XAC3173 conserved hypothetical proteinchromosome CDS3732279 1317 - 0.609719
XAC3446 conserved hypothetical proteinchromosome CDS4059601 2355 - 0.669214
XAC3728 conserved hypothetical proteinchromosome CDS4402059 573 - 0.663176
XAC4035 conserved hypothetical proteinchromosome CDS4725019 882 + 0.695011
XAC4106 dipeptidyl peptidasechromosome CDS4809007 2403 + 0.651685
XAC4321 hypothetical proteinchromosome CDS5106045 1542 + 0.650454
XAC4372 60 kDa inner-membrane proteinchromosome CDS5172987 1725 - 0.653913
acvB virulence proteinchromosome CDS1574857 1374 + 0.678312
acvB virulence proteinchromosome CDS2809593 1263 - 0.662708
clpP ATP-dependent Clp protease proteolytic subunitchromosome CDS1232864 627 + 0.60925
czcC cation efflux system proteinchromosome CDS4894548 1272 - 0.716195
ecpD pili assembly chaperonechromosome CDS1643254 771 - 0.682231
exbB biopolymer transport proteinchromosome CDS2433931 663 + 0.647059
exbB biopolymer transport ExbB proteinchromosome CDS11740 762 + 0.649606
exbD biopolymer transport proteinchromosome CDS2434597 465 + 0.64086
exbD1 biopolymer transport ExbD1 proteinchromosome CDS12548 423 + 0.595745
exbD2 biopolymer transport ExbD2 proteinchromosome CDS12974 414 + 0.596618
ffh signal recognition particle proteinchromosome CDS1477750 1377 + 0.652142
fhaB filamentous haemagglutininchromosome CDS2091547 14262 + 0.631538
fhaC outer membrane hemolysin activator proteinchromosome CDS2089806 1701 + 0.653145
fimA fimbrillinchromosome CDS3819045 441 - 0.548753
fimA fimbrillinchromosome CDS3819610 441 - 0.557823
fimT fimbrial biogenesis proteinchromosome CDS3093250 528 + 0.577652
fimT pre-pilin like leader sequencechromosome CDS3127151 573 - 0.609075
flgM flagellar proteinchromosome CDS2321035 312 + 0.628205
flhA flagellar proteinchromosome CDS2262166 2094 - 0.680038
flhB flagellar proteinchromosome CDS2264256 1131 - 0.651636
fliE flagellar proteinchromosome CDS2286057 318 - 0.666667
fliF flagellar proteinchromosome CDS2284319 1725 - 0.668985
fliH flagellar proteinchromosome CDS2282702 621 - 0.708535
fliI flagellar proteinchromosome CDS2281329 1377 - 0.702977
fliJ flagellar FliJ proteinchromosome CDS2280870 456 - 0.666667
fliN flagellar proteinchromosome CDS2277508 471 - 0.658174
fliP flagellar biosynthetic proteinchromosome CDS2276257 789 - 0.657795
fliQ flagellar biosynthesischromosome CDS2275150 270 - 0.637037
fliR flagellar biosynthetic proteinchromosome CDS2274345 774 - 0.670543
fliS flagellar proteinchromosome CDS2303655 414 - 0.628019
ftsY cell division proteinchromosome CDS3010436 1665 + 0.694895
gspE general secretory pathway related proteinchromosome CDS4962683 1752 + 0.688927
hrcC HrcC proteinchromosome CDS484443 1824 + 0.642544
hrcJ HrcJ proteinchromosome CDS479630 762 + 0.619423
hrcN HrcN proteinchromosome CDS481704 1329 + 0.671934
hrcQ HrcQ proteinchromosome CDS473845 915 - 0.668852
hrcR HrcR proteinchromosome CDS473214 645 - 0.593798
hrcS HrcS proteinchromosome CDS472949 261 - 0.636015
hrcT HrcT proteinchromosome CDS483531 831 + 0.614922
hrcU HrcU proteinchromosome CDS477460 1074 - 0.602421
hrcV HrcV proteinchromosome CDS475529 1938 - 0.617647
hrpB5 HrpB5 proteinchromosome CDS481013 702 + 0.692308
lepB signal peptidase Ichromosome CDS1529344 801 + 0.616729
lspA lipoprotein signal peptidasechromosome CDS1433838 519 + 0.645472
nodT outer membrane efflux proteinchromosome CDS5090617 1461 + 0.699521
oprM outer membrane proteinchromosome CDS3331350 1512 - 0.656085
oprN outer membrane proteinchromosome CDS1716831 1425 + 0.675789
oprN outer membrane protein OprN precursorchromosome CDS2877981 1509 - 0.689198
oprN outer membrane proteinchromosome CDS518627 1512 - 0.699074
pilB pilus biogenesis proteinchromosome CDS3817245 1737 - 0.614277
pilD type IV pre-pilin leader peptidasechromosome CDS3821670 864 + 0.642361
pilE PilE proteinchromosome CDS3121305 432 - 0.546296
pilF fimbrial biogenesis proteinchromosome CDS2360135 780 + 0.639744
pilM fimbrial assembly membrane proteinchromosome CDS3989305 1083 - 0.628809
pilN fimbrial assembly membrane proteinchromosome CDS3988523 783 - 0.639847
pilO fimbrial assembly membrane proteinchromosome CDS3987861 666 - 0.594595
pilP fimbrial assembly proteinchromosome CDS3987331 534 - 0.636704
pilQ fimbrial assembly proteinchromosome CDS3985410 1902 - 0.601998
pilT twitching motility proteinchromosome CDS3430941 1038 - 0.61368
pilU twitching motility proteinchromosome CDS3429688 1131 - 0.621574
pilV pre-pilin leader sequencechromosome CDS3126672 468 - 0.570513
pilY1 PilY1 proteinchromosome CDS3121739 3348 - 0.533154
pilZ type IV fimbriae assembly proteinchromosome CDS1283583 354 + 0.635593
secA preprotein translocase SecA subunitchromosome CDS934116 2739 + 0.622125
secB protein-export proteinchromosome CDS268228 513 + 0.637427
secD protein-export membrane proteinchromosome CDS2939722 1845 - 0.626558
secE preprotein translocase subunitchromosome CDS1117485 408 + 0.580882
secF protein-export membrane proteinchromosome CDS2938664 969 - 0.613003
secG protein-export membrane proteinchromosome CDS3165628 426 - 0.683099
secY preprotein translocase SecY subunitchromosome CDS1144633 1365 + 0.606593
shlB hemolysin activator proteinchromosome CDS4826870 1683 - 0.680927
smeC outer membrane proteinchromosome CDS392943 1467 + 0.650307
smf DNA processing chain Achromosome CDS4473861 1146 + 0.697208
sppA protease IVchromosome CDS4484304 1902 - 0.660883
tatA sec-independent protein translocasechromosome CDS4977261 228 - 0.649123
tatB sec-independent protein translocasechromosome CDS4976619 627 - 0.673046
tatC sec-independent protein translocasechromosome CDS4975885 738 - 0.635501
tolB TolB proteinchromosome CDS3692326 1320 - 0.654545
tolC TolC proteinchromosome CDS4087550 1383 + 0.65799
tolQ TolQ proteinchromosome CDS3695468 780 - 0.642308
tolR TolR proteinchromosome CDS3694861 450 - 0.631111
traY integral membrane proteinchromosome CDS2820490 2172 + 0.589779
trwB XACb0030 TrwB proteinpXAC64 CDS26776 1575 + 0.607619
ttgC outer membrane efflux proteinchromosome CDS2507090 1485 + 0.695623
ttgF outer membrane channel proteinchromosome CDS3285133 1470 - 0.667347
uptC type II secretion system protein-like proteinchromosome CDS4278514 1134 + 0.62522
virB10 VirB10 proteinchromosome CDS3084400 1170 - 0.589744
virB10 XACb0038 VirB10 proteinpXAC64 CDS35001 1221 - 0.642097
virB11 XACb0037 VirB11 proteinpXAC64 CDS33968 1023 - 0.579668
virB11 VirB11 proteinchromosome CDS3083345 1041 - 0.563881
virB3 XACb0046 VirB3 proteinpXAC64 CDS42523 300 - 0.546667
virB4 XACb0045 VirB4 proteinpXAC64 CDS39867 2634 - 0.597191
virB4 VirB4 proteinchromosome CDS3079127 2454 - 0.57498
virB6 VirB6 proteinchromosome CDS3073334 597 - 0.579565
virB6 VirB6 proteinchromosome CDS3077157 1053 - 0.582146
virB8 XACb0040 VirB8 proteinpXAC64 CDS37030 675 - 0.586667
virB8 VirB8 proteinchromosome CDS3086330 1047 - 0.575931
virB9 VirB9 proteinchromosome CDS3085566 768 - 0.489583
virB9 XACb0039 VirB9 proteinpXAC64 CDS36223 783 - 0.57599
virD4 VirD4 proteinchromosome CDS3088230 1674 - 0.588411
xadA outer membrane proteinchromosome CDS4191829 6573 - 0.690704
xcsD type II secretion system protein Dchromosome CDS824637 2079 + 0.667148
xcsE type II secretion system protein Echromosome CDS826720 1488 + 0.666667
xcsF type II secretion system protein Fchromosome CDS828188 1209 + 0.668321
xcsG type II secretion system protein Gchromosome CDS829425 465 + 0.63871
xcsH type II secretion system protein Hchromosome CDS829932 471 + 0.647558
xcsI type II secretion system protein Ichromosome CDS830386 381 + 0.669291
xcsJ type II secretion system protein Jchromosome CDS830763 603 + 0.666667
xcsK type II secretion system protein Kchromosome CDS831365 990 + 0.656566
xcsL type II secretion system protein Lchromosome CDS832351 1089 + 0.680441
xpsD general secretion pathway protein Dchromosome CDS4178555 2292 - 0.624346
xpsE general secretion pathway protein Echromosome CDS4187865 1596 - 0.629699
xpsF general secretion pathway protein Fchromosome CDS4186472 1176 - 0.647109
xpsG general secretion pathway protein Gchromosome CDS4185791 432 - 0.634259
xpsH general secretion pathway protein Hchromosome CDS4185272 510 - 0.688235
xpsJ general secretion pathway protein Jchromosome CDS4184227 636 - 0.665094
xpsK general secretion pathway protein Kchromosome CDS4183379 852 - 0.664319
xpsL general secretion pathway protein Lchromosome CDS4182261 1122 - 0.679144
yajC preprotein translocase YajC subunitchromosome CDS2941757 354 - 0.646893
yapH YapH proteinchromosome CDS4819731 7236 - 0.681592
yjcP outer membrane efflux proteinchromosome CDS1666433 1491 + 0.691482