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# Chlamydophila abortus S26/3, S26/3

>CAB667 conserved membrane protein
MKQRNHQETLSKKIAKANKQAGAGFLDEIKKIEWVSKRDLKRYVKIIIAS
IFGLGFSIYCVDLVFRKLLTLLSGITSFVFG
>CAB944 putative TolB protein
MLRRMLVSAFLMFGIISLYAKELEVSVRSEISRLPIHVELKIGSNDASQQ
KYLRSLCTTFINDLALGDRLQPSLVQTGSSSAPFNIAMVSHYPEITFTLA
RGTQNHQPVHSLMLTEDNALNRQKIHEAADKIHYALTSVPGISSGKIIFS
LSKNSQDCELKQGELWSVDYDGGNLRPLTQENSLSITPSWMHIGSKKPYL
YVSYKFGIPKIFLGSLENTTGKKILHLQGNQFMPAFSPRKKLLAFISDAY
GNPDLFLQSFSLSQGAMGKPRRILNETFGTQGNPSFSPDGSKLVFVSNKD
GRPRLYILQIDPEMLSPRLLTKKYRNSSCPSWSPDGKKIAFCSVIKGVRQ
ICVYDLATGKDYQLTTTPVDKEGPSWAVDSQHLVYSAGNTGESELYLLSL
ITQKTKKIVIGLGEKRFPSWGGFPDNQ
>CAB445 putative membrane transport protein
MNKLLNFVSRTFGGDAALNMINKSSDLILALWMIGVVLMIILPLPPTIVD
LMITINLAVSVFLLMVALYIPSALQLSVFPSLLLITTMFRLGINISSSRQ
ILLKAYAGHVIQAFGDFVVGGNYVVGFIIFLIITIIQFIVVTKGAERVAE
VAARFRLDAMPGKQMAIDADLRAGMIDAQQARDKRGMIQKESELYGAMDG
AMKFIKGDVIAGIVISLINIVGGLTIGVAMHGMDLAQAAHVYTLLSIGDG
LVSQIPSLLISLTAGIVTTRVSSDKNTNLGKEISSQLVKEPRALLLASAA
TLGVGFFKGFPLWSFSILSLIFGILGVILLAKKNNATKQGASGASTTVGA
AADGAAAAEDNPDDYSLTLPVILELGKDLSKLIQQRTKSGQSFVDDMIPK
MRQALYQDIGIRYPGIHVRTDSPSLEGYDYMILLNEVPYVRGKIPANHVL
TNEVEENLKRYNLPFITYKNAAGLPSAWVSEDAKTILEKAAIKYWTPLEV
IILHLSYFFHRSSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLT
EIFKRLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISF
KFSQGQSAISVYLLDPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMR
NTITPTPPGGQPPVLLTAIDVRRYVRKLIETEFPDIAVISYQEILPEIRI
QPLGRIQIF
>CAB015 conserved hypothetical protein
MVNPVGPIDESKNIAPADLSTLGMQASAANRSAEAESIAEVEGKNGSPRP
SVNTLGRLSFLSSARNALINFFNKISALFTGKSVPKDFEEAKTQASNAQN
ALKTAKTFDEFKTALQQLQDAIKYMEQFAETDEQKTEVATLKAALAEKQP
IIDTINKLGGILEENEKLLEAIKTTSSIDQITGVAGQVEVNKAAAAALIE
ELKKLGVTADSYPVIGDTETKINTSSTEITKVAEAINSAYTAGKNSTTAV
GQAQANNSPANIEASKNTIKEAKSTIDAALGLAPDSPIVKAAQKEQQKAV
KDIDKIKPSGGSDVPIGGPGAPGSVGTSQNRGTTVGEARISMLLADVDNE
TAAIIMQGFRNMIDNFHTQNPDITAPLEEVLAQVTDLTTQANPADAEATT
QLQEIQQTLQEALQGISGEEGLTNALGAITTAASISTGAPIASANQGGSA
VKQLYKTSSASASSKSYVDTLSAGYGAYQSLNDVYSRSSAANREVLDRTS
TPALTRTVSRTETQPRDNDTAAQRFARTIAGNSHTLGDVYASVNVLQTLL
GVLQSNPQANEDEIKQKLTSAITKAPQSGYPYVQLSNDATQKFIAKLEDE
FARGSKRLAEAKEAAFEKQPLFIQQVLVNVASLFSGYLQ
>CAB909 putative type III export protein
MAISLPELVSVFESTYLNYILQKPPAYVWSVFLLLLSRLLPIFAIVPFLG
GKLFPAPIKIGIALSWVAIIFPKVLMSTHVANYLDDDVFYILIIKEICIG
TLISFILSFPFYAAQSAGSFITNQQGIQGLEGATSLISIEQTSPHGIFYH
YFVTIVFWLSGGHRIVLTILLQSLEVIPIHKFLPMEMMSLDAPIWITLIK
MCQLCLIMTIQLSAPAAVAMLMSDLFLGIINRMAPQVQVIYLLSALKAFM
GLLFLTLAWWFIVKQIDYFTLAWFKETPIMLLGSNPKVL
>CAB907 putative type III export protein
MRFIFRTFLCMFILSAPWCLADNGLYDTSCSSRCQPSKPTELPVASPQPE
VKKTYPQPTFRERVTADDVLPREHLSEGSFSDTYPDLTTQAVILIFLALS
PFLMMLLTSYLKIIITLVLLRNALGVQQTPPSQVLNGIALILSIYVMFPT
GVAMYNDARKEIQGNAIPRDLFSAEGAETVFVALNKSKEPLRSFLIRNTP
KSQIQSFYKISQKTFPPEIREHMTASDFVIVIPAFIMGQIKNAFEIGVLI
YLPFFVIDLVTANVLVAMQMMMLSPLSISLPLKLLLVVMVDGWTLLLQGL
MISFK
>CAB906 putative type III export protein
MKFFSLIFKHDEVVPNKKVLAPEAFSALLDAKELLEKTKEDSESYTNATK
EECEVLRKNAKEQGFKEGCEQWNSQLAYLEKETHSLRNKVKEALVPLAIA
SVKKILGKELEIHPETIVSIIAKALKELTQHKKIIIHVNPKDLAIVEQNR
PELKKIVEYADTLIIAPKADVTQGGCVIETEAGIVNAQLDVQLAALEKAF
STILKQQNPVDEAQNKQE
>CAB039 possible flagellar or type III secretion protein.
MTVAAEPSASWLKSRQDFLSSLVKTEEAVALPPFPKELCQNRLKEKFRLE
DTNLTIQPRGSLTAAQAVQDFGTHFLVQSFLAQPLTSGTFFFVTSEADLQ
SFMVSVFNDSSLASYFYEKDKLLGFHYYFSAELCKLLQELAWIPSLSVRV
VGDARFSTKDLQGSYQAVDVNCGLDGKTMRFRLLFPEATCASCQDFLSAS
NQNFDIHQLDPTPLTMSVEIGYCQLTQEEWQQVAHGSFILLDSCLYDPDT
EESGGLLTVQGHQFFGGRFIDQTSGEFKITSYPSVPQEAPTEETPEALPA
APLPGNYKLVAEASRYSLTVEEFLHLSQGSILNLNGIHPSRGVDLILNGA
KVGRGEIVSLGDVLGIRVLEV
>CAB876 conserved hypothetical protein
MTMSQSPGSLSDTEDSPEKTTDWDAGFSQGFSEGEASGYDKAFQELLSLI
QIFRKLSIRMLSEIEKIPQQLKPDLVELAILTCEKFLYKKLDNVEELALL
ISSALQQHTSLRSLSPVKIFLHPEDHKKLNDWIATHEIPMIKHAEFLPDI
SCKKSSYKMEVPSGILRQEIGEELDHLLSVLTV
>CAB633 probable signal peptidase I
MKDRFSLNKSRQVLHSTYKLLKSKKLAQDPESKQELQKLLEQLEEAIFQQ
DQEAASQLAQQAQQFSKRYPASFAKKSWELTKAILFAALAAFLIRQFWFE
LYEVPTGSMRPTILEQDRMIVSKTTFGLHFPFKKKPWGFRPEAVTRGGLV
VFTVGDLPIPNSDTKYFGFIPGKKRYIKRCMGKPGDTLYFYGGKIYGLDK
EGAVIHFPNDFGLEHLYHVPYISFDGSVEIVNSNKTTAYFKQMYQPCGKL
SLPQEGPYGQFFHQGVWHNDTPSALKKPHSSPVSYADLFGIGNYAMVRIL
THKQASLYHTLPNATTQAYLEISHTPNVSYPTPNLQHYNNQIVPTIQPMK
TLLPLRQEHIHLIRNNLTTSRFVISDGVACKYQPFSTDPEGAAKLYGLPF
PGVDDGCYEYSKGEAYKIGFGGMRYKLKPTHPLMQLNDNQVIDLFNCGMN
FSSFFIPKNPKYNPLPNRYAFYNQGNLYVMDSPIFIKNDPALQKFVESEK
TKQEESTEDRPYISFIDRGPPPQDPEQFAEFIRNFGIQIPENHVLVLGDN
YPMSADSREFGFVPLENLLGSPLWIFWPLGHFGRLKNVPAPTTLPGYLVN
GLALGFFVYIFGYIRYQRRHRLFPKNHKKK
>CAB205 putative lipoprotein signal peptidase
MSSRSRSTFLAIACFVLIDWVTKLAVLLYLGNLPDANPILYQYSWGKLLF
CICPTFNEGAAFGLFAKYKYFLFFIRITIILGILAFLFLRKKTSSPAIRF
SLILLCSGAIGNVGDIVFYRHVVDFISIGYKRWFFPTFNFADIFISLGTL
IFIYKLYFPTKQKIK
>CAB041 putative general secretion protein
MKIVTSNIGRKILQVINKKKGKIGVLSILLFFDLVLLGVNSQKPATDEPR
SRVKNSQTDEKSQIAACPKNIVNKTSAKKSDKQAVVKNFPSNQPRHFKKS
TQTFSPGFSEGSPFAKPEAKKRLQDNRYTQTTAKKTPRFLSKQEEKTEVT
EGKSEEERIWEDKRAYAKRAVNAINFSVKKLVEESDKKSSQEEGFKVDHH
SGSPNALTKSPDKQPSIDKIAIQPEATKEEEEAPALLKGKQITCEDLKDN
GYTVNFEDISVLELLQFVSKISGTNFVFDSNDLNFNVTIVSHDPTSVDDL
STILLQVLKMHDLKVVEQGNNVLIYRNPRLSKLSTVVTDGSAKDNCEAVV
VTRVFRLYSVHPTSAVNIIQPLLSHDAIVSASEATRHVIVSDIAGNVEKV
GELLAALDSPGTSVDMSEYEVRYANPASLVSYCQDVLGAMAEDEAFQIFI
QPGTNKIFVVSSPRLTNKAIQLLKSLDVPEMAHTLDDVTSPASALGTSGA
ANPKSLRFFMYKLKYQNGAAIAQAIQDIGYNLYVTTAMDEDFINTLNSIQ
WLDVNNSIVVIGNQTNVDKVVSLLNGLDLPPKQVYIEVLILETSLEKSWD
FGVQWVALGDEQGKVAYASGLLSNTGLANPAKSTVPPAKPSPGDIPLPTP
GQLAGISDMMYASSAFGLGIIGNVLSHKGKSFLTLGGLLSALDQDGDTVI
VLNPRIMAQDTQQASFFVGQTIPFQTTSTIIQETGTVTQNIEYEDIGVNL
VVASTIAPNNVVTLQIEQTISELHSAQGTLTPVTDKTYAATRLQVPDGCF
LVMSGHIRDKTTKIVTGVPLLNSIPLLRGLFSRTIDQRQKRNIMMFIKPK
VISSFEEGTKLTNKEGYRYNWEANEGSMQVAPRHAPECQHPPALQVESDF
KMLEIEAQ
>CAB036 putative type III secretion or flagellar-type ATP synthase
MDELTTDFDTLMSQLNDVHLTTVVGRITEVVGMLIKAVVPNVRVGEVCLV
KRYGMEPLVTEVVGFTQNFAFLSPLGELTGVSPSSEVIPTGLPLYIRAGN
GLLGRVLNGLGEPIDSEIKGPLVDVNETYPVFRAPPDPLHREKLRTILST
GVRCIDGMLTVARGQRIGIFAGAGVGKSSLLGMIARNAEEADVNVIALIG
ERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRLNAAYVGTAIAEYF
RDQGKTVVLMMDSVTRFARALREVGLAAGEPPARGGYTPSVFSTLPRLLE
RSGASDKGTITAFYTVLVAGDDMNEPVADEVKSILDGHVVLSNALAQAYH
YPAIDVLASISRLLTAIVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRR
GSDREVDFAIDHIDKLNRFLKQDIHEKTNYEEASQQLRAIFR
>CAB446 putative membrane transport protein
MGEKTEKATPKRLRDARKKGQVAKSQDFPSAVTFIVSMFTTFYLSSFFAK
HLGSFLVSIFKEAPINHDPRVTLYYLNNCLTLILTTSLPLLGAVGFVGIL
VGFLVVGPTFSTEVFKPDLKKFNPIENLKQKFKVKTLIELLKSILKIFGA
ALILYVTLKNRVPLIIETAGVSPIVIAVIFKEILYKAVTSIGIFFLVVAV
LDLVYQRKNFAKELKMEKFEVKQEFKDTEGNLEIKGRRRQIAQEIAYEDT
SSQIKHASAVVSNPKDIAVAIGYIPEKYKAPWIIAMGINLRAKRIITEAE
KYGIPIMRNVPLAHQLWDEGKELKFIPESTYEAIGEILLYITSLNAQNPN
NKNINQPDNL
>CAB718 putative transmembrane protein
MDTFYSLLPQACILLLATDALTNVLVLNHVLARYSRKERLSLLVRESLFA
LFSMFALYEAAVGTLYVLKTPLCAIQVVGGIAVTLTSMRAILNLSKENSW
KGFTTPSALSMVTPIALPLMIGPSWLAACCILIGKRYSFASISLILILSW
VFISLTTIILQVFVSGGKDKAKVLLATQTVLGLFATIVGTQLLMSGLQLA
FL
>CAB850 conserved membrane protein
MLSRLFMCFLFLLSSSSLLADEDGSQVKSTFAQPAVMLGIAILFFYFILW
RPEQKRRKAMEKRKNELAKGDKVTAMGILGTIDEIREHTVILSITSGKIE
ILKAAISEILKPDGTKA
>CAB719 putative transmembrane protein
MLTLINLSLLFYVLFDSPGSIPVFVSLLKRFSAKRQQRIILRECIFALVT
LILFVTFGRKFFHFLDISLYAFQFIGGVLLFSVSLKMMLVPPPVESDSSE
PQSEPIFFPLAFPVITGPAVITSLLSYMEEALLSKEIIFSAMIIAWVLSV
FTLLSSSFFNHILGSSGLVALERLFSIALLLMSANLMLKGISIAFNIGFY
IQ
>CAB753 putative cell division protein
MFKFFSSKIQSLFKKTLSPDLLEFTESLFYEADFGSDLTEELCSRLRKCR
KPDASTVKDLVSSLLRETLDSLPLAEPCQGPAPIVSLILGSNGSGKTTTV
AKLAHYYLSRSEKVMIVATDTFRSAGMNQMRCWAEKLGCGFVSGKPGGDP
AAIAYDGIASAMSRGYDRVLIDTSGRLHTHTNLLNELSKIVSVCNKVHPG
SPHERLMTIDATLGGNVIEQVRVFHDTVPLSGLILTKVDGSAKGGTLFRV
AKQLKIPTKFVGYGELIGDLEEFHIDRFLEKLFPPS
>CAB246 conserved hypothetical protein
MNPINPYGSSVPGPSQGPAEGGAKSDSLRGVGGKFTRRGAIRGRKGVRGY
QGYLESKVSKQGSEKAQKAASRVGHIGERIKAGGAKASQAISQVASKAGK
ILAQTASQVKSKIQNKIGGQKGAVKGKKESQGTPQKSQMKVLAKEAVARV
GKIASGGKRGLGAGKLDVTESPLKRAKTEVPSAEDRGTFSPDLGAIAGRD
RMKLPRASSPEGERKSQRIADQKTKGILKQPGAPKTGKKGGVRWADQEGK
NLEQ
>CAB908 putative type III export protein
MIALAASFKSMLFEYSYQSLLLILIISAPPIILASIVGIMVAIFQAATQI
QEQTFAFAIKLVVIFGTLMISGGWLSNMIFRFASQIFQNFYKWK
>CAB458 putative lipoprotein
MNKRSLLFVSLVGMAFVGCQIFFGYNDFRSCKALTEKQKTISEQVLAATK
SMGLGVSPWTTHPDEEVNKNHYAVCIGDRLLLLNQGNSASSVYSSGSRWD
FIEETTACDNIHVALYGETGKSTVPSHTGKVFLPVTSEALPVLVVEFRNN
QEPIVFLGQYKQDEGKVYNKDSQVYGTSLVFWRSGNEYLPLGIYNSKEER
LESLDLPMTKAAIFSNSRETNTDTHSGQYFVLSNEYMQLVISQESGAIEG
INLPFSSEDSKSIVNEIGFDRDLKSQVPSEASFPGLPSVGPNNQIVSDTI
GGYYPLLRRGILSDSKKRTPASYHALNIVSGRDLVNPVTSGYRVSVFNSN
VLELESYDGSIKKTYTFPEQQPYAFEVAVGLNRSSDDMWITSGVPEVEIM
SNTFSPAIKYRVIKKNKGQLDKVKLPKSKDPLSLRSGVYPQWILNSNGYF
GIILSPLTDIPAGYAAAYVSGNSVPTRLSSLYPKNQAYPASKYPGYETLL
PLPKEEGTYRFLVYAGPLAEPTLKALDRAYTNPKGENSQYLDCITFRGLF
AFITEPFAALLFIIMKFFKMITGSWGISIILLTVFLKLLLYPLNAWSIRS
MRRMQKLSPYIQEIQQKYKKEPKRAQMEVMALYKTNKVNPITGCLPLLIQ
LPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWTTPVWFIGNEF
HLLPILLGVVMFIQQKLSALQKKGPVTDQQRQQEAMGTMMALLFTFMFYN
FPSGLNIYWFSSMLLGLIQQWVTNKILDRQHLKNEITVNKKKQR
>CAB904 putative type III export protein
MFRSSISCCLFFIMTLFCCTSCNSRSLIVHGLAGREANEIVVLLVSKGVA
AQKQPQAAASTGGASAEQLWDISVPAAQITEALAILNQAGLPRMKGTSLL
DLFAKQGLVPSEMQEKIRYQEGLSEQMASTIRKMDGIVDASVQISFTTEA
EDNLPLTASVYIKHRGVLDNPNSIMVSKIKRLVASAVPGLSTENVSVISD
RASYSDITINGPWGLTDEIDYVSVWGIILAKSSLGKFRLIFYFLILTLFI
ISCGLLWVIWKTHTLILSLGGAKGFFDPAPYSKVALETKKPEEGAGEKKE
GQAQPNPEGTEDPKDNAPEATEGNEENEGV
>CAB941 putative transport protein TolQ
MLQFTQNPIIQAYTEADLFGRGIFFSLLILSLCTWTVLHQKLAIQKKFLK
SGKSLKDFLIKNRHAPLSLEIHPELNPFADLYFTIKRGTLELLDKNRQQA
PDHGPVLSVEDIQSLETLLGAVMPKYRALMHENNFIPATTISLAPFLGLL
GTVWGILTAFSHISSGEVGGTAMMEGLATALGTTIVGLFVAIPSLIGFNY
LKAHSSRLILEIEQTAYLLLNSIEVKYRQTNL
>CAB175 putative protein export protein
MKQRFGRNLSIIICVFGLALYYVLPTCLYYSRPLNKKVDEKEAQQIVRKL
TNQVAEVRSDIIPRVSSVLSALKLRGHIVQHPSIPGVVNIHFKDNADAYT
FLENMIYGEPTVPIKSSRLYVLGYDNKDGGVVQVTGTLTTALTENDFSFV
SYNREDAEPAKEMLNAALYLLTSAPAHACSCGYTSIWNTASIARVVQLAE
NLAVGLDILPHSRTVALLNYFFSSEKDYSAFLSRLENVATLSDLSEQQRS
VLQSVYQNLKLRAPRWKKAFTRIVDNSLDCSALSPFFSSVDFSPKERKLV
FCLDPHVVAKRDELSAEQRLDFDSWLAKEKQRLARKLQQPAQESVQGFVF
NLSDKEASGKIVLHGQRIYQGIVEHLATLALHRPPAQSCDLIRENFPIHC
RLPKESDAYGCFIFSPEKSCSHFSKGSIYVVLKGLRSVAAKYEQGAEEDA
KIFDKDLHNLYNCFAHTDVTPWSLGEDEVLEIRQPLQRYFDVWGENFVVA
NEGATASLEVRDIRDRLETLNRIEKRRQEEWVRWHEQYRQSSCSMDPQQR
IRAAVPHRSAFVENLKLNLRKYSRGDSVLRLGIDFIGGKQIRLAFKDHQG
KQLTDKEGILKVSDELYARLNRLGVSEVEIRREGDNVHLSVPGSTKISSE
EILGTSQMTFHVVNEKFSPYSALRYEVQRFLDYLWFTAQSQEATSPEAVN
KLASDIFNNPDSRLPSSVQEAVAKLQQEGLAFPKMDNEIASSHLDTTYSM
IAIEKDVEGKANPLMIVFRNYALDGASLKNIRPEFAVGEGYILNFSVKDT
GIAQKAHDVSPRESFHAWTSTYCQEGINGTANGQHSSGRGWRMAVVLDGY
VVSDPVLNAPLKDQASVSGKFSHREVHRLATDLKSGSMSFVPEVLSEEVI
SPELGKQQRTQGIISVCLGLAVLIILMSVYYKFGGVIASGAVILNLLLIW
AALQYLDAPLTLTGLAGIVLAMGMAVDANVLVFERIREEYLLSRSLTQSV
EAGYKKAFGAIFDSNLTTVLASLLLLVLDTGPIKGFALTLILGIFSSMFT
ALFMTKFFFMVWMNKTQETQLHMMNKFIGIKHDFLKECKRLWMVSGSVIA
LGCVALGFGAWNSVVGMDFKGGYALTLNMADQTSVDVTKFRSTLGDKFKQ
VGISPRDFRIKTFGSSDKIKIYFSQNALTRVQTPERPATDTADPNLSIVM
HILSDTGIDISSESLKDVQNFWFKVSGQFSNKMRQQAFIALMGALCIILL
YVSLRFEWRYAFSAICALIHDLLATCAVLVATHFFLQKIQIDLQAVGALM
TVLGYSLNNTLIIFDRIREDRQEKLFTPMPILINDALQKTLGRTVMTTAT
TLSVLLILLFVGGGSIFNFAFIMTIGILLGTLSSLYIAPPLLLFMVRKEE
RKQQ
>CAB877 putative flagellum-specific ATP synthase
MTHLNYEKSQLHYWQPYRTCGLLSRVSGNLLEVQGLSACLGELCRICTPK
YPDILAEVIGFHNQTTLLMSLSPMHHVALGSEVLPLRRPPSLHLSDHLLG
RVIDGFGNPLDNKESLPKTQIKPLISPPPSPMSRQPIQEIFPTGIKAIDA
FLTLGKGQRIGVFSEPGSGKSSLLSAIASGSKSTINVIALIGERGREVRE
YIEQHASGLKHHRTIIVASPAHETAPTKVISGRAAMTIAEYFRDQGHDVL
FIMDSLSRWIAALQEVALATGETLAAHHYAASVFHHVSEFTERAGNNERG
SITALYAILYYPNHPDIFTDYLKSLLDGHFFLTHQGKALASPSIDILLSL
SRSAKKLALPHHYAAAEKLRSLLKTYQEALDIIHLGAYSPGHDKDLDDAV
KILPSIKNFLSQPLSSYCQLENTLKELEALVNLE
>CAB888 clpP, ATP-dependent Clp protease proteolytic subunit
MQMTLVPYVVEDTGRGERAMDIYSRLLKDRIVMIGQEITEPLANTVIAQL
LFLMSEDPKKDIKVFINSPGGYITAGLAIYDTIRFLGCDVNTYCIGQAAS
MGALLLSAGTKGKRYALPHSRMMIHQPSGGIIGTSADIQLQAAEILTLKK
HLANILSECTGQPVEKIIEDSERDFFMGAEDAISYGLIDKVVSSAKDTKD
KDTIS
>CAB222 clpP1, putative protease proteolytic subunit
MADGEVENKLRDVIERKILDARRVFFSEPVTDKSAADAIKKLWYLELTNP
GQPIVFVINSPGGSVDAGFAVWDQIKMMTSPVTTVVTGLAASMGSVLSLC
AAPGRRFATPHSRIMIHQPSIGGPITGQATDLDIHAREILKTKKRIVDVY
LEATGQSREVIEKAIDRDTWMTADEAKDFGLLDGILFSFNDL
>CAB942 exbD, biopolymer transport protein ExbD
MKRIIVEDTEEDPHVNLTPLIDIVFVILMAFMIAMPLIRIDSIALAPGTK
NHQVLEKEDALPTTIKVLADHTITLNDRPLSLEELKTQLTLVHQQDPNQV
PLLLQDGDTPFRLYQEVKTTIESAGFHELHIALKS
>CAB628 ffh, signal recognition particle protein
MISSLSQKLSSIFSSLVASRRITEENISEAIREVRLALLDADVNYHVVKS
FIAKVKEKVLGEEVWKHVSPGQQFIRYLHEELTELLGDKTDLNTSGNPGV
ILLCGLQGTGKTTTCAKLAAYVLEERKAKKVLVVPCDLKRFAAVEQLRNL
ISKTKAELYNSEGQDPVKVVSQALDYAKQERHDLVLIDTAGRLHVDEVLM
EELASIQKVSHASERLFVMNLAMGQDAVSTAKAFDNYLDLTGVIISMTDG
DARAGAVLSMKSLLGKPIKFEGCGEKIQDLRPFNAESMADRILGMGDTVH
FVQKMRECISEEEDEELGKKLIESTFTYEDYYKQIKAFRRMGPLRKLMGM
MPSLGGAKPSEKEIADSEEHMKKTEAIILSMTPQERKEEVELDMSRMKRI
ASGCGLTLGDVNQFRKRMMQSKKFFKNMSKERIEQMKKKMSGGNLWR
>CAB414 flhA, putative flagellar biosynthesis/transport protein
MVTSKQEKLWRMALIPLGILLSFLIPLPQLLLDTGLCINFILSLTVVFWV
FSLKSSLEARLFPALFVYLCLFRLGLNLASTRLILSSGWASPMIFSLGNF
FSLGSLGAGIAACCLFFLVNFLVIAKGSERVAEVRARFILEALPGKQMSL
DADLVSGRASAMDVEKQKQDLFEESDFFSSMEGVFRFVKGDAVVSCILLI
VNTIAAAYFACSVDRESASLWLTVVGDALVSQVPALMTSCAAATLISKVG
QKASLLEYMIDYYEQARVHFRTIALLFSSLLFIPGTPKAPVIVFAIALLI
AYKPPKDVQGPEILSEIFQQIHLSLSTDYTGVNPHELYAQAREEIFNETG
VFLHQEMKIFYRDKPASLSCCGKHFHLEEISLSRLLPILRNLLPEAIHGN
YVKMLVRQAQNVLGISIDEIIPKKISENSLLFLIKGLVKERVSLRLFPKV
LEAIALYGSPEENPEILAEKIRKYLGKHIGRALWDQQNTLEIITVDSHVE
RMIGDLYSKSNPLMCDKVICQVQTLLNQSAGGDFRAIITGCESRFELRKM
IEPYFPDLLVLSHNELPEEIPISLLGSVSDEVLTL
>CAB917 gspD, probable general secretion pathway protein D
MRFWRTPLVYFFGLSGLACCTPGLALTVAEKAASLEKSKDSIDISSGLAS
FNAEMKEYNLQLKSLYEEAAALRASGCEDEARWQGLLHQLTDVKNQIQRI
ENLWAAEIRERGENPDDYALWHHPEATIYNLVSDYGEDNVIYLVPQDIGS
IKVSSLSKFTVPKEGFEECLMQLLSRLGIGIRQISPWIKELYTTRKEGCG
VAGVFSSRKDLDLLPPTSYIGYVLNSKNIDVRADQHILRKFANLDTMHID
AFGGKLWVFGSVGEIHELLKIYDFIQEDSVRQEYRVVPLTKIEASEMLSI
LKAAFREDMTREGDEEGLGLKVVPLQHQGRSLFLSGTAALVHQAIDLIKD
LEEGIENPTDKTVFWYSVKHSDPQELAVLLSQVHDVFSGKEGTTPPSSEA
ILREAASTISIDTASVGSVKEGSVKYGNFIADSKTGTLIMVVEKEALPRI
KMLLKKLDVPKKMVRIEVLLFERKLSNQRKAGLNLLRLGEEVCKKTSSTI
SWTSSGILEFLFKGNTGSSVVPGYDLAYQFLMAQEDVRINASPSVVTMNQ
TPARIAIVEEMSIAVSADKEKAQYNRAQYGIMIKMLPVINVGDEDGKSYI
TLETDITFDTTGKNANERPDVTRRNITNKVRIPDGETVIIGGLRCKHASD
SQDGIPFLGEIPGVGKLFGMNSTADSQTEMFVFITPKILDNPIEKKERHE
EAILSSRPGENTEFRQALFAGEEAAKAAHKKLEFISAIELPASQVQGLEY
DGR
>CAB916 gspE, general secretion pathway protein E
MGGKSLLSQELLNALPYSFLKKHCLLPLEEQENGITMAYAHSTSLMAKDE
VQLLIKKPVLFILRDETDILKNLQKIYSNLEGKASDMLLSMKEGGLSQAS
EEEDLLENTDAVPVVRFLNLILKEAIEERTSDIHFEPLEDSLRIRYRIDG
VLHDRLSPPAHLRSALITRIKVLAKMDIAEHRLPQDGRIKIQIGGQEIDM
RVSTVPVIHGERVVLRILDKRNVILDISGLHMPKNIEKSFREVIAVPEGI
LLVTGPTGSGKTTTLYSVIQHLSGPFANIMTIEDPPEYKLAGIAQIAVKP
KIGLSFACGLRHLLRQDPDVVMVGEIRDQETAEIAIQAALTGHLVVSTLH
TNDAISAIPRLLDMGVEPYLLSATIIGVVAQRLVRKICPNCKEHCAASVQ
ERAFLHSIGVDADVPLYYGKGCAQCFRSGYKGRQGIYEFFHPDAALRSEI
AMHKPYHVLREYAEQKGFQPLLQHGVTLALSGETTLSEVFRVTKRYD
>CAB915 gspF, general secretion pathway protein F
MPRYRYTYLNAKERRKQDWIEALHLQEAREKLAQQGVQLLSIREVPPRRV
RLKNSELIIFSKQMLLLLRSGLPLYETLSSLRDQYQGQSMSGLLTVFMEK
LRGGGSLSQAMATYPGIFDNFYRSAVLAGESVGNLEGCLQNIIIVLEERE
QMTKKLTAALSYPIVLLVFSLAVILFFLTGVIPSLKETFENMEPNTLTSI
VFGLSDFVCKYKYLILGFLGLGMVSIIATRRQPFWKKWYENTVFSIPGVK
NFFVKLGFTRFCSVVSAILRGGGTLIEGLELGCGAVPYDVLREDMRQMVH
AVIEGSSLSKELAKRPWVPKLALGMVALGEESGDLADVLGHVAHIYNEDI
QKTLTWITSWCQPVILVFLGGIIGIIMLAILIPLTSNIQIL
>CAB914 gspG, putative general secretion pathway protein G (periplasmic)
MKKQKRKQSITLIEMMVVITLIGIVGGALAFNMRGSIQKGKAFQSEQNCA
KVYDILMMEYATGGASLKEIVDRKESVLEGAAWCKEGKKLLKDAWGEDII
VKVNDQGDDLIVFSQRATGTNKKHG
>CAB277 pmp10G, polymorphic outer membrane protein
MRNSIYGVLILSSFTVSIAFANAENLGSSAGFDGSTGTDQFTAKQSTQAG
GTTYNLTADVIIQHVKSTDPANTSCFKNSTGDITFTGANHSLIFEDIVST
AQGAAISTNTDGKTITMSGFNVLSFIAAPQATTGNAAIYGIASITIKENN
RLVFDTNHSTAAGGAIHCLKTGATATTLTLEKNASMIFRNNSSATTGGAI
HTDHLVLTAGGYTLFENNHATQKGGAISIAGSGELSLSADEGSIIFRGNT
YTDAGNRVNNAIYVGANGKFTKLEAKEAQSILFYDPILVEGAAADNLEIN
KANGATTYTGSIIFSGRHIHSPHKKMKHVSKFTQPLTLAAGSLILEKGAH
LEAKSLTQTAGSRIILDQTSSIKVQENVDIKDLWLSLDEFVEPTATHIAS
SGDAHNVTITGPLGIFADQETFYNHHALAHNVDQELLQLADKDITKISLV
DVPESVRENLDAHRGYQGSWTIDWKTVPGSTSGGVTILGTKTATVHWRPT
GYIPFGGAQEITTPLVPNTLWGNFSDIRNLERTIESLATNSLCSEGFWAT
GIKNFLYTQSGEKNFVFQHNNSGYAIGINKHTLSENVFSAAFSQLFGKDR
DNAQGQVEHQTLSGSLYAHHVGTIPMLRFLCGDSKQCVPELQASPCIPVI
FNAQLSYSHSHNNLTIAHEDQTKTTGNWSNYSVATELGSTFVYTLSKCPS
ILKNVSPFIKLQGVYSEQRKFTEEGLRRCLFSSTYLANLALPVGIKIQGI
CPRKLLAYDLSAMYVHDVFRINPETMTLFLIGRLAPWTTPATHLDNKALV
VQGSGRFAVRPNIEVFASGNGELRSSSHSYNYDFGAKIHF
>CAB278 pmp11G, polymorphic outer membrane protein
MQGILMKNSIYGVLLFSSFALSTATKLLADADSVNLATGFNGSTSETFNV
KQTDNADGTTYILGSAITFEHINQLKPANTSCFANTAGDLTFTGNRRLLY
FNNISSTAKGAAISTTADGKTLTISGALQLIFYMSPRLATGNGVIYSNSS
VLIENNSQGSSGLNKSAGKGVFICCEKSTDVGATSPTLIIRNNGEFLTVG
NAATSSGGAIYAEKMILSSGGYTKFQSNVSYDQGGAIAIAPNGEISLSAD
KGNIVFERNLKIANKQNTPNAIHLGDNAKFLQLRAANNKAIFFYDPITTT
GSVADRLIINNSQGEASTYDGAIVFSSLNLFTHSPECKLSSFSQGLTLAA
GSLVLEEGVCVQAPSFDQRAHSQLFMNPGTKLQATQNISVKNLHLNLNRI
AEEPAYITTTDDASSVDICGPVVMHIDDEIFYNQTVLANELSVECLNLSS
PHLDNITIDDVPAVPIMTLESHRGYQGTWEISWKEQPKLTFGKATIAPNK
QMHLIWKPSGYVPFSGGTGEFTTSLVPNSLWNLFLDTRFSQQAIEKHAVS
SGNGIWISSMTNSFLQGSTNNNHGFRHKSSGYTAGGKIQTLQDDIFSVSF
SQLFGRSKDFGSATSKDTFLSGSIYAQHSRRLLPIMRFLAGTSTYRPRLL
LSIPKNLPINFDVLVSYSYDSNHMKVKNSNRTQTRGSWNTYGYSAQIGSS
IPFVLDVSHTFFQYVSPFIKLHWIYAHQVQFQEQGIKRRSFNNSNLKNLS
LPLGLKIQGQTLRRLSYEFTGMYITDLYRCNPESVTSLISGGLLPWTTTG
TNLSKQAALLQGSSNISLTSHINIFAQGTVEFRRSSYSYNMDFGSRVHF
>CAB281 pmp13G, polymorphic outer membrane protein
MKHPVYWFLISSSLIVSNSLYSEEPDQKTLTSAHSYNGNTNSEPFNPLST
SNSNGTIYTCTGNICIAYAGLDGSGLSSSCFTDTAGNLSFLGNGYTLCFD
NITTQSSHPGAISVSGTNKTLDISGFSLFSCAYCPPGATGYGAIKAVGNT
TIKDNSSLVFHKNCSTGEGGAIQCKASSSEAELKIENNQNLVFAENSSSS
SGGAIYADKLTIVSGGPTLFSNNSVSASSPKGGAICIKDSGGECSLTADL
GDITFDGNKIIKTNGGSPTVTRNSIDLGSSGKFTKLNAKEGFGIFFYDPI
TGGGSDELNINKQDTVDYTGKIVFSGERLSDEEKKVAANLKSDFKQPLKI
GSGSLILKDGVTLETKSFTQTEGATVVMDLGTTLQTPSSGGETITLTNLD
INVASLGGGGVAPDPAKVEATTESKTVTINAVNLVDDNGNAYEYPILAAS
QPFTAIEVRSGSSGSITKPTTNLENYTPPTHYGYQGNWTVTWKQGSSAQE
KTATLTWEQTGYSPNPERQGSLVPNTLWGSFSDIRAIQNLMDISVNGADY
HRGFWVSGLGNFLHKSGSDTKRKFRHNSAGYALGVYAQTPSEDVFSAAFC
QLFGKDKDYLVSKNSSTVYAGSIYYQHISYWNTWNTLLQNTLGAEAPLVL
NAQLAYCHASNNMKTNMTDTYAPPKTTYSEIKGDWGNDCFGVEFGAKAPI
ETASLLFDMYSPFVKLQLVHAHQDDFKENNSDQGRYFESNNLTNLSMPIG
VKLEKFSHKDTASYNLTLAYAPDIVRSNPDCTASLLVSPTSAVWVTKANN
LARHAFILQAGNYLALTRNTELFSQFGFELRGSCRTYNIDLGSKIQF
>CAB282 pmp14G, polymorphic outer membrane protein
MRPSLYKILISSTLTIPISFHFSQLHAEVALTQESILDANGAFSPQSTST
AGGTIYNVESDISIVDVGQTAALASSAFVQTADNLTFKGNNHSLSITNAN
AGANPAGINVNTADKILTLTDFSKLSFKECPSSLVNTGKGAMKSGGALNL
ANNASILFDQNYSAENGGAISCKAFSLTGSSKEISFTTNSTAKKGGAIAA
TGIAHLSDNQGTIRFSGNTAVNSGGAVYSEASMTIAGNNHVAFSNNAVSG
SSDGCGGAIHCSKTGSAPTLTIRDNKVLIFEENTSSAKGGAIYTDKLILT
SGGPTAFINNKVTHATPKGGAIGIAANGECSLTAEHGDITFDNNLMATQD
NATIKRNAINIEGNGKFVNLRAASGKTISFYDPITVEGNAADLLTLNKAE
GDKTYNGRIIFSGEKLTEEQAAVADNLKTTFTQPITLAAGELVLRSGVEV
EAKTVVQTAGSLILMDAGTKLSAKTEDATLTNLAINPNTLDGKKFAVVDA
VAAGKNVTLSGAIGVIDPTGKFYENHKLNDTLALGGIQLSGKGSVTTTNV
PSHVVGVAETHYGYQGNWSVSWVKDNNSDPKTQTAIFTWNKTGYVPNPER
RAPLVLNSLWGSFIDLRSIQDVLERSVDSILETRRGLWVSGIGNFFHKDR
NAENRKFRHISSGYVLGATTNTSREDSLSVAFCQLFAKDKDYLVSKNAAN
VYAGSVYYQHVSKFDDLTRLFNGPNTCCSGFSKEIPIFLDAQITYCHTAN
NMTTSYTDYPEVKGSWGNDTLGLTLSTSVPIPVFSSSIFDSYAPFAKLQV
VYAHQDDFKEPTTEGRVFESSDLLNVSVPIGIKFEKLSYGERSAYDLTLM
YIPDVYRHNPSCMTGLAINDVSWLTTATNLARQAFIVRAGNHIALTSGVE
MFSQFGFELRSSSRNYNVDLGAKVAF
>CAB283 pmp15G, polymorphic outer membrane protein
MSNPFYHQKNLVMKSSVPWLLISSAITFPLSSLATEKAALSSAPQNTGEQ
TLSSSDNYDGSSSSDTPFTCKNSSFASGTTYTLTSDVSFTNVSKTQDPKS
QQSTAESQNSSQDTDKTDSPSAPTTDQSSDIENNKDSKGEEEENHPPHVL
PEHSPTVDTGEEVTAPTEVPGTSETIETVGTPGASGTQGAPEDKQDKESS
EEAGSTKVEEKTEADHEAKETEKEKETLESSLPHTPLSFTASSDVANEHG
SPSPETKTPPTAVASQANGETNKSCFSNTDGSLTFVGGNHSLTFSNISVT
APGSAINNSAGSALTFSGFKDLSFVCATNQDQTKADSAIYVGPKATSGDG
ELSVQAEGSKANSHTEGSVNTALIKYAGIPADATATNGESQEDPATNVAP
ATQGGAEKEEAANSPDIILKQNVNITFSSNSSKTAGGAIRVSGSATIENN
TGTCTFSNNNAKEQGGAISVNGNCDITGNKNVVFSGNQAQEIPAPSIVTV
EEAAVEEPVEAKGSGGAIYCVKAPISIPATPIQPPKQTLPSLKSAALSGE
THAKVAQKEEPSPDPCLTISGNASVIFDNNSSTVTGGAIHAKKVVLSSSG
NMTFSNNSSGKGGAIYIADGGDISITATTGSIIFQGNKVTAADSITLPTK
KEIAIAAESIEEKTDPSQASGSASAGMTSAFFTLANKAEIPAESQAKENS
KPTCNSIHLGSGAKISQLRAQTGQTIFFYDPITTTAPAAAAVVTAKQPEA
SLAKATSGIPASASAVSVPAPAPTKTPLKINAPDTQDPEIQKVAAEAAQQ
SAVYNGKIVFSGEKLSSEDAKNPLNATSVIHNDVSLEAGTLVLSSGAGLL
VDSFTQKEGSLIVMDGGTSIITNVTPASEGLQSRSTPPSPKNAIPVIRAV
SKVIASSLINLRERADSGAGAVVPTIEESPDGSITITNLAVNLDSLENGK
VITLAAKGGSGSVTLTGDLQFQDSSQNFYDNPLLNKNFTLNFLDISAPDA
EKIHTEGFNIIPQGATSSNLGYQGKWEVTEVKDSSGKVSFEMKWVSTGYI
PTANRRATLVPNSVWCSAIDMRAFQNLVEVSTEGEDFHRGLWISGISNFF
HKDSTKVQEGFRHISSGYVVGVSTQPISNKVMDLAFCQMLGKSKDYRLAD
ARSHVYAASIHTKCEKLVNHYTFSKRKGAILARKPEKSPIIFDAQLSYSL
SHNSMTTKHTPNPSSRGKWNNHCVAGELGSYLPILVDHPAIEELFPFVKL
HIVFVQQEDFKETQGGTENRNFQSAHFVNVSLPLGVRFEKTNKLNTYNIR
LAYQPDIYRDAPKSKVFLPSVHTAWSTGATNLSRQAMILDGSDHHHLTDN
LEVFCHGAFELRGSSRNYNVDIGGRYKF
>CAB598 pmp17G, polymorphic outer membrane protein
MKHPVYWFLISSSLFASNSLSFANDAQTALTPSDSYNGNVTSEEFQVKET
SSGTTYTCEGNVCISFAGKDSGLKKSCFSATDNLTFLGNGYTLCFDNITT
TASNPGAINVQGQGKTLGISGFSLFSCAYCPPGTTGYGAIQTKGNTTLKD
NSSLVFHKNCSTAEGGAIQCKGSSDAELKIENNQNLVFSENSSTSKGGAI
YADKLTIVSGGPTLFSNNSVSNGSSPKGGAISIKDSSGECSLTADLGDIT
FDGNKIIKTSGGSSTVTRNSIDLGTGKFTKLRAKDGFGIFFYDPITGGGS
DELNINKKETVDYTGKIVFSGEKLSDEEKARAENLASTFNQPITLSAGSL
VLKDGVSVTAKQVTQEAGSTVVMDLGTTLQTPSSGGETITLTNLDINIAS
LGGGGGTSPAKLATNTASQAITINAVNLVDADGNAYEDPILATSKPFTAI
VATTNASTVTQPTDNLTNYVPPTHYGYQGNWTVTWDTETATKTATLTWEQ
TGYSPNPERQGPLVPNTLWGAFSDLRAIQNLMDISVNGADYHRGFWVSGL
ANFLHKSGSDTKRKFRHNSAGYALGVYAKTPSDDIFSAAFCQLFGKDKDY
LVSKNNANIYAGSLYYQHISYWSAWQNLLQNTIGAEAPLVLNAQLTYCHA
SNDMKTNMTTTYAPRKTTYAEIKGDWGNDCFGVELGATVPIQTESSLLFD
MYSPFLKFQLVHTHQDDFKENNSDQGRYFESSNLTNLSLPIGIKFERFAN
NDTASYHVTAAYSPDIVRSNPDCTTSLLVSPDSAVWVTKANNLARSAFML
QAGNYLSLSHNIEIFSQFGFELRGSSRTYNVDLGSKIQF
>CAB776 pmp18D, polymorphic outer membrane protein
MIEKKVSRFQKSTFSHSVVLAILVSTGMITNNDKLYGYVPASEVILDTLS
MPKAELEVPSAGIFKKEKPIHAQGPKKGETDQETSLLDNTSTCVYKVLVA
EDEQRQHLENTSTIFQTCNVLSWENLDTRSTNAEAEKGKTSPQYAVEDLQ
QGLAFCYKNAPEHLLDANTPGFLGIALKGTRMKSGLSFTNLKSTAAGAAV
YSEEDVLFESFKEKLVFDGCESQAGGGAVSGRSIAIHGCHALTIANSKTD
VELKPTSGESSDFSLGGGAFNANQVHPVHKSRFASGDVVFLDNQGSVLLS
GNHADKANGGAVACGNFICSVNHSDIHYLDNYALSGGAVSSSKSMDFCGN
LGSIEFLNNQALASSEGSLFLGGGALAAGERISFLNNHGILCSKNTAKCR
GGALLSREVRIVENVGSSLFKENTAEVTGGAISSQHQVEIDQNFGNVTFE
GNTSKFGGGAIYCLLPAQPDTDAQEPRIGSGDIKIVDNVGEVHFTSNANL
LDSQETHSYLGGGALYGSNVLISGNIGVITFSKNQAGQCESSSTHIGGGA
IFAHEVVTLSGNSGEVTFSYNKGQILPLPLSPTPAEESSTSNAPIESSTP
VNLGVRGGGAIFAKSISVEDNSAFVSFSENSMEIRDNQAQKENPLGGGAL
FGLDSVGLKNNVDLAFSNNRVSGGNSSGGAILSKEVAIAHNGKVQFTRNC
AKFLGGAVCALGDTLRIENNESTVSFVGNRTIAAGGALASAAGAVSISQN
LGKVEFKDNFVFGDPYIENLEKGQINSEGHHSGGGAIFAKTSVVIRGNDN
KVLFSGNSAGCFGGAILTGSLTSTESQERFAAKVESDNTKVVITENTGDV
IFSGNSTTASKHPEHNLFGGGAIHTQDLIIKNNEGSVAFYNNYAPTGGAV
RISEKGSVVLQALGGDIVFQGNRNSEDVSNGMYFSGKESKLVEVSAAGET
SVIFSDAIVFEDLTLRKGTKDHEDALNDPTLIFNSKAKDDAEITHSGNVR
FSHATSKIPQVALLESGTLMLSNKAQLWLCGLKQEKGSEILLSAGTVLRI
FDPNAKPTEKIESPTSNVYYSAHESVKQPENKTLADINSIGIDLASFVSS
DDETPVPPQIIVPKGMTIGSGSLDLNLLDSVGAGYENHALLGKETDITLL
SFKSASSVLDTPDLDHALEELRVKVSVPTITEDTYGHMGRWSDPQVVDGK
LMINWKPTSYKLNPEKSGAIVLNSLWGHCGDLRSLKQQQLAHNITAQRME
LDFSTNIWGSGMGTFTNCATIGKVDGFTHRAGGYALGLDTQLIEDFLIGG
SFAQFFGYTDSQSYSSRSDQSGYLGSGYLGIFTGSWLFKGMLIYSNMHND
LNTQYPQPNLGGSKGSWDSRGILADAHVDYRYIVNSRRLISSIVSAVVPF
VEAEYVYVNFPKFTEIGSEARTFDEGHLQNVAIPFGVTLEHNYSRGQRSE
VNSVSFSYAIDVYRQEPNVLIHLPEASYSWNGVGSNLARKSMKAQFSNDT
EWNSYFSTFLGFTYEWREHTIAYDLNCGMRLIF
>CAB200 pmp1B, polymorphic outer membrane protein
MKWLSATAVFAAVLPSITVFGEPLSKELNSSYRGSGLSASDSASKNFTQQ
TQDDSGTTYTITGDVSFRNFTNIPDPKPRTVEPDPAPAPAPDTQSNTVSS
KPKSESKPSLSTGYENTVTQPQETLYHGPDDLHVTSFASHVVEGNQAISD
IGKFADEKSHPLSFSLSSSSHAVSTSTTDASTSTPAPKGGGAFYNDKAGP
ITFITHAGNPGSLSCTLIRMTGQGGAIYSKGPISFDGLENLTFRDDLSQQ
AGGALFTDSTLTIRNILDSIEFTNNSARVPIPLVPVLPAKSAPGAGVGGL
VPPKLKETHLLPRYFSQEIKVQDAESQTSIFPTYTTETAGNGGAIFAKGA
IVISTYKDMTFRSNSAEFPLIIDVIKEQIDAQKKAASLPSASEKIHASAD
VAKQQVREAPPVIKGSGGAIFGLDTITIRDGSEDTLFILNTATGAGGAIY
GDKDISLNNIANLRFQSNSADTRGGAIYAKGNLTIQDSTVLTQFNANSGK
TGGGAIYCLGNVTLSNLSQVRFGVNKAGNYDLKITIPGKEASTAHVLSSV
VEEQKAPVPIEPPLGKGGGIYVEKAFTVSHVTSILEFINNQATDHGGGAY
VKGALNYSNSHRIQFTTNTSKKSGGGLYCESDVTFSNLTGKTLFQGNKAE
ENGGGICLADTKSLTLSNLENFCLVNNTTSKSGGGAYIPKALSFTFSNPD
TVSSTTPATVPVFGSAVITGNKAEENGGGVYTTKAALTNLESIDIGQNSA
KNGAGLCTTSAPAAGVAAIGEEELDFKVDYVVTANVTKNNATESGGGVYG
KKGKISRLDHLNITGNSAGKSGGGLYFTEKLTLEGIEISKISDNTAKESG
GAIYAKALTCTNFPDGLTVSNNKAQVTSTTTSSPQKASIPTAITGGAFSA
ETLILEKLQGNCTFSGNAAIDNNTASLSSDPTDPNIQGGALYAKTSLTLQ
NSSGSLTFSGNSATTKRSSTTGQVAGGAIYSPTVTIQNCSQPISFVGNSA
LCTPAEQPPAEDPAPKATFGGAIAGTTSITFTGNQALFFKENSADNGSAI
GCKNGSNGTVTFSDAVFCSFEGNIAKNRGTIYADTLSIPQGYMNFSNNSS
ANDGSAIYFTKKADITAAASILFLDNKVTLAQTSDKQRSQVNNLGAAIYG
EGNSTDAELNLTALGGSITFKNNQCAPQGKKSNPSFCSITGKVKLTLNAA
ANQSINFYDAVRTQTVQSSGSNYTTLDINKTSSEGNPPKYTGTVLFSSEY
HENKSVIPQKVVLHDGTLILGKNTELNVVSFDQKAGSSLVMGPGAVLSTQ
QKTGGSSGATGGIAINNLTIDFSDIVSEDGTATPPALKLGVAPAAAAAGA
RAHVARNNVLPRADVSNPDVTKEKVYLTGTITLIDPAGTFYQNPYLGEDR
QIELLKLPESGKVEISDLTLEGDTKPLKGYIGSWTLGPGDQNGTLKANWK
FEEYRRWIYIPRDNYFYVNSILGSQNSLIAVKQGIVNNMLNNARFDDAAY
NNLWLCGIGSFLQKEQGEESRSFSYHSRGYSLAIDAKPRPEFILGASFSQ
VFGHSKSEKAVDNYKHKGSDHSFQGTLYAGKSFYLPYRRTQSPQPILLQG
VMTYGYMKHDTTTYYPSIHERNLGNWEDLGWLFDIRMILDLKEPSQNSTT
RFSFYSEAEYTGVRQKQFTELDYDPRTFDSFAYRNLSIPLGFVFEGALMQ
YNILMYNKLSLAYVPVIYRNKPKCNYRVNSTGQTGQVYGVIPTRNTGRVE
YSSQLYLGSYWTLYGTYTVEAGMSSLVQMANCGARMIF
>CAB201 pmp2A, polymorphic outer membrane protein
MKQTFFWKLVFLSSLAPLTQLSATEVVLPLSGIHTGEDPELFTMLTTSPQ
GTQYTLRGEFTLKDFLGLSIHKPGGAFRNLEGNLTFTGSSPLAVLNFTNL
QLGSQGAGIFSKSLLNFENLKTLRVQNNQSTGGVITSRQDMFFTKNTQLL
FENNVSRGPGGAILLTGTQPNRVVFSEQRGGISFINNQAEVVQNISHSGN
GGAISSEVAGSTILFDGNQEILFQKNQAKFGGGIYNAQGSVEFSKNRNTI
TFTENYALESGGVICANLCSINTQSAPVYFRKNRADYFGGAIHSHQTIVK
NNDAAIFFSENSAEGGGAITASSCHLIASQPIIFSENSAGNLGGGAIYLG
GPQPQLYLHAQAGDIIFIGNVARVSTKHSSGLHNNAITIKGSPENIRLVA
NENQSIIFYDPFLATSPSAHPININSGDNIFHCGSVIFSGEKLPLDRQDK
TNKTSIFNQPVYLHNGTLSITGGAILAVQEFKQFGGVLNLSPGSMLTSYN
SLGKDVVISNINFGLDTAHSHLPAEIRSGNAVIKLSGSPQIHDPDNIFYD
NHSLASQPYQMEIIFKSDKGIHTEKFVSEEIAIQQNTYGYQGIWKFHWSE
GDSKKHKTLRALWIPTGTFVLNPEKEGSLVPSSVWSTFSGMRASNDAILD
NYLNNNTLFPIKHMCIFGGVVSSILEQNTNHDNHFSTTQAGHNLGIKLPF
SPNTVVCATFSQLHGSSSQDQIPGKSRSHMLMGTVAAFKNWKALSFRFSI
SYAEESHVMKHQFSKKDITRGAWKNQGIRGCVGLSYAYPKGIRCLKITPF
VNLEYTTINQNPFIETGYDPRYFTSSRLNNLALPTGVSLELRFFGAKYSL
LSEFSMAYIKDLFREDPLATASLILNQHSWKVGGVFMGQEALNLKFRTTF
KCKLAKAYLGISTMQREGNSFSGDAFGGISLSF
>CAB266 pmp4E, polymorphic outer membrane protein
MVSDLCCPSMCPYCRSLFYLISFSLCSYELICLAKDKTTSSSYTLSASGY
SYPLSTLLGIDGSINTSLENYGLLHDATTDIDITGQKYFYINYQYFKDNG
GAVTAKDLNISKNTGPIVFGKNTSYQNGGAVSSTNCNITENKQRCCFINN
ATMLTPDAREATQAGGAIQCSQLAISNNQGSCEFISNVSLIQGGAISSSG
DVQITENHQPVILNNNKCLTNESKGGGVYSNNCSITSNHAPITFINNQSG
YGGGIFSTTNCNISYNSEIVSFLSNSGVNHIYSSQDYGGGAICSSNCNIT
NNSKGVIFQNNVSRRNGGAIYSKNLTIQDNGPVLFLNNVSTWGAGIQNYG
GNSKFYLSADQGDIVFRNNRSVKSNNRNAIRSTVNLYLQIGARHGYSVKF
YDPVEHEHPSTLGLVFNPESHHLGTVLFSGADVSPDEASDQNYFSLLRNT
CKIAHGVVAVEDKAGLGIYNISQEEGILRLGNNSVIKTLKKRTSTSGSTS
ETYEGSSLDLTKLALNLPSILAPGANAPKIWLDPDDTSKENAITENEPKV
TLSGPLLLLNSENQDPYDSLDLSSGITRVPLLYLCDNKSNKIDAQNLDIQ
AVNETHHYGYQGIWSPYWEQYTTETTNTNHRYLYANWTPTGYIPNPIYRG
DLVANALWQAAYNIATGLHTLEHCSHKIPNREISGGGLGTYVLQKTRNSQ
QGFQLFSKGYSTEVAGSTETQHNFTLSFAQFYSEIRESKFKNKVSSNCYF
AGAQIQIPLFDEDILTSASLGYVYSHSRVKTKNPTLKTASEGHFHGHTIG
SEICCMLPEGGVSYLQFRPFIKALGIHAIQESFKETGDHIRSFETQHPLI
NVTLPIGISCYAQHEASLKTDWKFQLAYTPTIYRQKPKILTRRWISKGSW
ITSGTPVDYHAGSVTINNTISFFNKMSLSINYRGDFSKSTLCNFLNITSE
LQF
>CAB268 pmp6H, polymorphic outer membrane protein
MPLSLRSSSFCFLACLCSSGWVAAQTINQTNLTPPLYDIGEAFYLTSNCF
IKDVYGAKFPSSFLGSSSNLTIFGKQRSLTFSQCHAPVKEGASLISAAEA
LTLSHLSKLVLNENISIGKHGLISGKDITITSSKAVTVTNNRTPYTPVVT
ESVPTSVTVNCFCGSAVHTTTSLNITKIRNQITFGSNSGNFGAALLNDTN
ASCNIENNSAAISFSQNFAACGGGAIYDGTVTFKNNSGPIALLGNTAAKG
LQSKTPNPAKPIGSGCGGAICVPTKSVSFVDNTGGCNISSNLAQNDGGAI
YATTCTFANTSPTYITKNSAKENGGAICAKALTVNAQGPMVFFNNRAQKG
GAVYISPTVGNTSDPATSTLSLTAKSGDMVFIGNMLDGRPGVRNAIHMEG
DSKVTALNASGLSNLIFHDPITNTGPTNNGKSLHTITVNSPGYSGSVKFT
SETLTISEKLNPANTTSSLFGKVVIEDGQLIVTNNAKLKVLGLTAETGRL
TLGSGSGIELLSRTNSNPTPDNFTISKLGCDIHSYLNPDYSPAQVHSGTK
SVTVSGSLDIVSEDSAELYDNPLLQESLSFPFANFRANSNGPTKDNFTEG
PIDVPEHYGYQGVWSSSWTTPLLAPTPNGGIPSGTSNQTLYVVWRPEPTH
RAPYILDPERRGEIVSNTLWTSFLATQVFSEALEKNFLNRNEGVLVSAKA
IGNYIRQPIHKSHEGFKGRYGGYQASIGINYPDEASIGLAFGQLYGQVKS
KPYDTHSTEQISVFAFFGKFLLATENTATNISWEAAYGYAVNHIKTNYLN
PITQRTRKSKGRWHNNTYYAAVSVEHPFLTWCTLTRKVAHDFDFSGFISA
EFMGGWQNAFAEQGYLPRSFSRGRGHNIALPIGFTSEWHTPFKKAPSTLT
LKLAYKPDIYRVNPHNVVTILANNESIPVTGAFISRNGFYLQVHDSVELS
QHTTGFVDYVFDSKKSYASHRVITGLQGTF
>CAB269 pmp7G, polymorphic outer membrane protein
MKASFRKFLVSTTLTLPCSFQAFSLEIVVPNGTYNGDLREMFPYTITSNP
EGTTAILSGNLNILNLDNSMAATPSSCFFNSAGSMTIIGKGHDVTFTNLR
TSVNGAALSSLITSSPESFSYTITGVKTFSCSNCSALLGRNNSNSILSPK
GGAVYSKSPIFFKNIQNLIFKDNCAADNGGALWGQVVDISNVTKSLKFLS
NVGANGGAIGASTSLNVTRCPSILFRSNSASRLGGAIHSVNPQTPPPPPP
PGNGVINTVVNFSDNGSVQFDSNNAKSGGAIYSKGNINFSNNVQLLMQNN
TASPEIGDSNEVLGQGGAIYCTQATATKKAAPVFTGLTITNQHDIFFANN
FAANAGGAIYGEKVSITSSGRTVFTNNTAKTGGAIYIADNGELSLSADYG
NMTFYDNLNTNGGSPKRNAVTLGKGATIKLLAASGDHKLCFYDPIVTTLP
EKAPNGSNTLTINPDRGNSAPFTNYIGTVLFSGAHANAESAPNASTIYQK
VILGGGKLVLADKASLSVVSFDQQSDSILLMDNGTSLTITEHSYATSSEA
VAAAASVVTAAEVSSVTSSTAATAASVTNQANSDGVVSIKDLHINLGSLT
QDGEGAKIETKNTSGTITISEHISLDDVSGNAYENHDIFNRNTVTLKVLS
LSTAGDNKITESDLQLTPRGDADPQYGYQGSWKLSWENGTNGDAQKKKVL
KATWTKTGFVPSPERQASLVPNSLWGAFIDLRSMNALATASCDGFGYGKG
LWVAGISNVFHHDRNCVSHGFRRISGGYVIGANSQTLSDSVFGVAFSQVF
GKSKDYVVSTTKSQAIAGSAYLSIKRPLSNTIFTTFAARINYSHTNEDMK
TRYTFIPEASGNWDNNCWLGEVGGSLPIVLQTTKLHLNQFVPFVNVQIGY
AEHGSFREQLAEARSFCSSRLINLAIPCGFKIDRRSHSYPDFYSLAVSYV
PDVWRRNPGCTTLLLANGARWKTPATNLDRQGLLIEGSSHTAVNNNIEIF
SHGSCELRESSRNYNINVGSKFRF
>CAB894 secA, preprotein translocase SecA subunit
MLDFLKRFFGSSQERTLKKFQKLVDKVNLYDEMLAPLSDEELRNKTAELK
KRYQDGESLDDMLPEAYAVVKNVCRRLTGTPVEVSGYHQNWDMVPYDVQV
LGAIAMHKGFITEMQTGEGKTLTAVMPLYLNALTGKPVHLVTVNDYLAQR
DCEWVGSILRWLGLTTGVLISGSPLEKRKDIYRCDVVYGTASEFGFDYLR
DNSIATSVDEQVGRGFYFAIIDEVDSILIDEARTPLIISGPGEKHNPVYF
ELKDKVADLVQLQRELCNQLALEARRGLELFLDMDILPKDKKVIEAISEF
CRSLWLVSKGMPLNRVLRRVREHPDLRAMIDKWDTYYHAEQNKEESIEKL
SQLYIIVDEHNNDFELTDRGMQQWVDKAGGSAEDFVMMDMGHEYALIDGD
DTLSPTEKINRKIAISEEDTRRKARAHGLRQLLRAHLLMERDVDYIVRND
QIVIIDEHTGRPQPGRRFSEGLHQAIEAKEHVTIRKESQTFATVTLQNFF
RLYEKLAGMTGTAITESKEFKEIYNLYVLQVPTFKECLRVDHNDEFYMTE
REKYHAIVKEIARIHAVGNPILIGTESVEVSEKLSRILRQNRIEHTVLNA
KNHAQEAEIIAAAGKLGAVTVATNMAGRGTDIKLDEEAVVVGGLHVIGTS
RHQSRRIDRQLRGRCARLGDPGSAKFFLSFEDRLMRLFASPKLNALIRHF
RPPEGEAMSDPMFNKLIETAQKRVEARNYTIRKHTLEYDDVMNRQRQTIY
AFRNDVIRSEDIFGLAKEAISHVALMIASLIVSRDHPTGNSLPRLEEWMN
YSFPLQLNIEELKRLKSIDAIAERVADDLIEVFQNKFASMVQEITEAAGE
KVDANGVCKDVIRSVMIMHIDEQWKIHLVDMDLLRSEVGLRTVGQKDPLI
EFKHESFLLFESLIRDIRIAIVKHLFRLELTMTREQRPQNVVPVVATSFQ
NNENFGPLELTVISDSDDE
>CAB110 secY, putative preprotein translocase SecY subunit
MTTLRQIFSIAELRQKLFFTFALLAACRIGVFIPVPGINGERAVAYFKQL
LGSSQNLFQLADIFSGGAFAQMTVIALGVVPYISASIIVQLLLVFMPSIQ
REMRESPDQGKRKIGRLTRLFTVGLACIQSLLFAKFALKMNMSIPGIVLP
TLLSSKLFGAPWIFYLTTVIVMTTGTLLLMWIGEQISDRGIGNGVSLIIS
LGILASFPSVLGSIVNKLNLGSQDPSQLGLFSLLLLCLIFVFVLVTTILI
IEGVRKIPVQYARRVIGRREIPGGGSYLPLKVNYAGVIPVIFASSLLMFP
ATIGQFMSSDSSWLKRVAMMLSPGSWVYSSCYVLLIIFFTYFWTATQFHP
EQIASEMKKNNAFIPGIRQGKPTQTYLEYTMNRVTLLGAVFLAVIAILPS
ILGRVLNVDANVSYFLGGTAMLIVVGVVLDTMKQVDAFLLMRRYDSFLKK
DRSKGRH
>CAB126 sohB, putative exported protease
MFMKTFWHFMSKGFLSILGLSLGVVLAFFVTVMLVVSTSGMHDSQFVNMP
DAKGEVKDVGKDAPIIAVLEMKDVIASSKHTAKIIQEAITTLDSPPYKDR
VKGIIIDMDCPGGEVFEISRVYSTIQFWKQRTQCPVYVFVNGLCASGGYY
VACAADKIYSTSSSLIGSIGVLSGPYFNVKEGLSRYGVQSDLLIAGKDKA
PMNPYTEWTAKDREIRQEIIDYLYGQFVDVVVTNRPLLTKDKLVSVLGAR
LYSPEKALEEGYIDVTNVTKQQVLQDLVADCKIENNYRVIGLGSDGWLKR
VMSSITNSPVITGKIQHELLPSLDNSISTFYYLDS