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2024-04-30 05:24:05

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Azoarcus sp. EbN1, EbN1

Number of genes found: 118

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Azoarcus sp. EbN1, EbN1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA ebA2406 conserved hypothetical proteinchromosome CDS1435588 2889 - 0.669436
NA ebA3702 Bacterial type II secretion system protein, probably involved in Flp pilus synthesischromosome CDS2180845 948 - 0.68038
NA ebA4764 similar to Tfp pilus assembly protein FimVchromosome CDS2820095 2955 + 0.651438
NA ebA6713 conserved hypothetical proteinchromosome CDS3988215 873 - 0.712486
NA ebA1598 hypothetical proteinchromosome CDS936379 1236 - 0.604369
NA ebA5109 hypothetical proteinchromosome CDS3028680 1251 - 0.606715
NA ebA3707 flp pilus assembly protein, ATPasechromosome CDS2184265 1155 - 0.658874
NA ebA1223 putative bacterial general secretion pathway protein G related proteinchromosome CDS722066 447 + 0.653244
NA p1B61 hypothetical protein1 CDS27949 288 - 0.524306
NA ebA7261 similar to Fels-1 prophage protease subunits of ATP-dependent proteasechromosome CDS4282070 1266 - 0.71248
NA ebB36 probable secretion proteinchromosome CDS730606 441 + 0.641723
NA ebA1847 probable outer membrane proteinchromosome CDS1077789 1506 + 0.722444
NA ebA3703 putative Flp pilus assembly proteinchromosome CDS2181809 975 - 0.660513
NA ebA1226 putative type II secretion system proteinchromosome CDS723703 1692 + 0.677305
NA c1A237 Protease IVchromosome CDS1379735 1842 - 0.684582
NA ebA6422 hypothetical proteinchromosome CDS3812237 690 - 0.656522
NA ebA4910 hypothetical proteinchromosome CDS2916669 528 - 0.691288
NA ebA1239 General (Type II) secretion pathway (GSP) D proteinchromosome CDS727807 2316 + 0.686529
NA ebA4256 general secretion pathway protein-related proteinchromosome CDS2507233 1080 + 0.640741
NA ebA3445 putative outer membrane proteinchromosome CDS2042333 1428 + 0.75
NA ebB250 conserved hypothetical proteinchromosome CDS4281710 345 - 0.689855
NA ebA1783 outer membrane protein, ortholog involved in agglutination in some bacteriachromosome CDS1041051 1452 - 0.666667
NA ebA177 conserved hypothetical proteinchromosome CDS109622 753 + 0.65073
NA ebA3718 hypothetical protein, Flp pilus assembly protein, proteasechromosome CDS2192036 567 - 0.634921
NA ebA416 conserved hypothetical proteinchromosome CDS248678 2853 + 0.663863
NA ebA2169 Outer membrane efflux proteinchromosome CDS1272994 1305 + 0.727203
NA ebA3705 probable secretion ATPase protein,similar to bacterial type II secretion system protein Echromosome CDS2182876 1353 - 0.671101
NA ebA5052 hypothetical proteinchromosome CDS2998884 510 - 0.645098
ccmD ebD8 Cytochrome c biogenesis proteinchromosome CDS2076242 210 + 0.67619
clpP ebA4970 ATP-dependent Clp protease proteolytic subunitchromosome CDS2954934 639 + 0.613459
cpaB ebA3714 pilus assembly transmembrane proteinchromosome CDS2189731 852 - 0.680751
cpaC ebA3713 probable outer membrane channel protein,probably involved in pilus assemblychromosome CDS2187995 1701 - 0.659612
exbB ebA1841 MotA/TolQ/ExbB proton channel family proteinchromosome CDS1073102 780 + 0.685897
exbB2 ebA5081 MotA/TolQ/ExbB proton channel family proteinchromosome CDS3011811 609 + 0.650246
exbD1 ebA1842 biopolymer transport protein ExbD/TolRchromosome CDS1073881 417 + 0.642686
exbD2 ebB176 biopolymer transport protein ExbD/TolRchromosome CDS3012428 423 + 0.65721
ffH ebA4351 Signal recognition particle proteinchromosome CDS2575108 1359 + 0.657101
fimT ebA5118 type 4 fimbrial pilin related transmembrane protein similar to FimT proteinchromosome CDS3033777 555 - 0.603604
fimU ebA5112 fimbrial protein pilin similar to FimUchromosome CDS3030652 522 - 0.603448
flhA ebA702 flagellar biosynthesis protein flhachromosome CDS408488 621 - 0.68277
flhB ebA705 Flagellar biosynthetic protein flhBchromosome CDS409112 1167 - 0.669237
flp ebD9 pilus assembly protein, pilin componentchromosome CDS2192768 171 - 0.48538
flp ebA3721 pilus assembly protein, pilin componentchromosome CDS2193292 201 - 0.577114
ftsY ebA1393 Cell division protein FtsYchromosome CDS814534 1161 - 0.672696
gspD ebA1602 General (Type II) secretion pathway (GSP) D proteinchromosome CDS938457 2310 - 0.630736
gspD2 ebA4915 general secretory pathway protein Dchromosome CDS2920294 2160 - 0.665741
gspE p1B167 predicted GSPII_E, Type II/IV secretion system protein1 CDS91406 1443 - 0.547471
gspE ebA1622 general secretion pathway protein E (Type II traffic warden ATPase)chromosome CDS947457 1713 - 0.634559
gspE2 ebA4169 Bacterial type II secretion system protein Echromosome CDS2459132 2358 + 0.68363
gspE3 ebA4914 general secretory pathway protein Echromosome CDS2918828 1470 - 0.695918
gspF ebA1619 general secretion pathway protein Fchromosome CDS946148 1317 - 0.628702
gspF2 ebA4913 General secretion pathway protein Fchromosome CDS2917619 1203 - 0.711554
gspG ebB45 general secretion pathway protein Gchromosome CDS945567 447 - 0.619687
gspG2 ebB170 general secretory pathway protein Gchromosome CDS2917168 444 - 0.68018
gspH ebA1616 general secretion protein Hchromosome CDS945100 471 - 0.66879
gspI ebB44 general secretion pathway protein Ichromosome CDS944678 426 - 0.647887
gspI2 ebA4908 general secretion pathway protein Ichromosome CDS2916304 369 - 0.688347
gspJ2 ebA4906 general secretory pathway protein Jchromosome CDS2915753 555 - 0.704504
gspK ebA1612 general secretory pathway protein Kchromosome CDS943069 945 - 0.648677
gspK2 ebA4904 general secretory pathway protein Kchromosome CDS2914843 924 - 0.702381
gspL ebA4900 general secretion pathway protein Lchromosome CDS2913629 1218 - 0.690476
lepB ebA5536 signal peptidase I (SPase I) transmembrane proteinchromosome CDS3296738 789 + 0.590621
lspA ebA4447 lipoprotein signal peptidasechromosome CDS2635473 552 - 0.652174
opmR ebA1973 outer membrane protein oprM precursorchromosome CDS1163609 1428 + 0.72619
pilA ebA1997 fimbrial protein PilAchromosome CDS1181424 417 + 0.582734
pilB ebA4346 type IV fimbrial biogenesis protein,PilBchromosome CDS2572410 1716 - 0.636364
pilC ebA4345 type IV fimbrial biogenesis protein,PilCchromosome CDS2571158 1236 - 0.639968
pilD ebA4343 type IV fimbrial biogenesis protein,prepilin cysteine protease (C20) PilDchromosome CDS2570240 852 - 0.664319
pilE ebD88 Pilus assembly proteinchromosome CDS3031175 414 - 0.555556
pilE1 ebA6 class II pilin protein PilEchromosome CDS2251 435 - 0.606897
pilE2 ebB136 fimbrial protein precursor PilE (MS11 antigen)chromosome CDS2302877 435 - 0.537931
pilF ebA1266 type IV fimbrial biogenesis proteinchromosome CDS748521 798 - 0.670426
pilM ebA2266 type IV fimbrial biogenesis protein PilMchromosome CDS1333978 1077 - 0.648097
pilN ebA2265 type IV fimbrial biogenesis protein PilNchromosome CDS1333409 573 - 0.616056
pilO ebA2264 fimbrial type-IV assembly protein PilOchromosome CDS1332741 672 - 0.668155
pilP ebA2261 type IV fimbrial biogenesis protein PilPchromosome CDS1332218 516 - 0.633721
pilQ ebA2259 fimbrial type-IV assembly protein PilQchromosome CDS1330056 2166 - 0.633426
pilT ebA1770 twitching mobility protein PilTchromosome CDS1032594 1044 + 0.64272
pilU ebA1772 twitching mobility protein PilU,transport fimbriachromosome CDS1033788 1134 + 0.638448
pilU2 ebA1324 twitching mobility protein pilUchromosome CDS781273 1230 - 0.625203
pilU3 ebA6387 similar to twitching motility protein PilUchromosome CDS3794239 1185 + 0.618565
pilZ ebB193 type IV fimbrial biogenesis protein PilZchromosome CDS3221992 363 + 0.663912
pulF ebA1225 Bacterial type II secretion system proteinchromosome CDS722528 1179 + 0.673452
secA ebA1433 preprotein translocase SecAchromosome CDS845219 2724 - 0.646109
secB ebA1056 protein-export proteinchromosome CDS619310 480 + 0.602083
secD ebA1417 protein-export membrane protein SecDchromosome CDS831563 1908 + 0.66457
secE ebA3810 Preprotein translocase subunit SecEchromosome CDS2244398 348 + 0.617816
secF ebA1418 probable-export membrane transmembrane proteinchromosome CDS833543 933 + 0.631297
secG ebC15 Protein-export membrane protein SecGchromosome CDS2865888 360 + 0.580556
secY ebA3846 Preprotein translocase SecY subunitchromosome CDS2270085 1326 + 0.602564
smf ebA2961 SMF protein, Rossmann fold nucleotide-binding protein involved in DNA uptakechromosome CDS1760048 1173 + 0.716113
sppA p1B184 predicted periplasmic serine proteases (ClpP class)1 CDS104212 990 + 0.536364
tatA ebB38 Sec-independent protein translocase subunit Achromosome CDS759436 228 - 0.583333
tatB ebD2 Sec-independent protein translocase subunit Bchromosome CDS758888 444 - 0.641892
tatC ebA1285 Sec-independent protein translocase subunit Cchromosome CDS758103 789 - 0.607098
tolB ebA2650 tolB protein precursor, periplasmic component of the Tol biopolymer transport systemchromosome CDS1579078 1281 + 0.675254
tolC ebA1679 outer membrane channel proteinchromosome CDS981709 1434 - 0.6841
tolC ebA1642 type I secretion outer membrane efflux proteinchromosome CDS961062 1362 - 0.687959
tolQ ebA2644 TOLQ-related transport transmembrane proteinchromosome CDS1576983 675 + 0.654815
tolR ebA2645 Biopolymer transport protein ExbD/TolRchromosome CDS1577675 414 + 0.637681
traC ebA6614 similar to plasmid-like sex pilus assembly protein traCchromosome CDS3920744 2559 + 0.656897
traC p1B154 sex pilus assembly protein1 CDS83198 2448 - 0.52165
traF p2B18 TraF protein of DNA transfer system2 CDS53324 540 - 0.62963
traF ebA6617 similar to plasmid-like sex pilus assembly protein TraFchromosome CDS3923676 591 + 0.675127
traG p2B19 conjugal transfer protein TraG2 CDS53860 1905 - 0.607874
traI p2B20 TraI protein of DNA transfer system2 CDS55761 2223 - 0.631129
trbB p2B2 mating pair formation protein TrbB2 CDS12707 960 + 0.608333
trbC p2B3 mating pair formation protein TrbC2 CDS13680 426 + 0.63615
trbD p2D1 conjugation protein protein TrbD2 CDS14108 312 + 0.612179
trbE p2B4 TrbE protein of DNA transfer system2 CDS14416 2538 + 0.624507
trbF p2B5 TrbF protein of DNA transfer system2 CDS16950 786 + 0.632316
trbG p2B6 mating pair formation protein TrbG2 CDS17753 897 + 0.627648
trbI p2B8 mating pair formation protein TrbI2 CDS19149 1389 + 0.657307
trbL p2B11 TrbL protein of DNA transfer system2 CDS21570 1647 + 0.620522
trbL ebA97 plasmid like TrbL protein, component of conjugation systemchromosome CDS49993 1605 - 0.619938
trhF p1B151 putative pilus assembly protein,TrhF (pilin signal peptidase)1 CDS82050 609 - 0.497537
yajC ebB40 Sec-system component preprotein translocase subunit YajCchromosome CDS831199 327 + 0.614679
yidC ebA2842 preprotein translocase subunit yidCchromosome CDS1691282 1653 - 0.633394