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2024-05-06 06:23:15

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Desulfotalea psychrophila LSv54, LSv54

Number of genes found: 100

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Desulfotalea psychrophila LSv54, LSv54
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA DP1537 unknown proteinchromosome CDS1718806 576 - 0.510417
NA DP2656 related to flagellar M-ring protein (FliF)chromosome CDS3019716 1638 + 0.484737
NA DP0855 conserved hypothetical membrane proteinchromosome CDS961442 1662 + 0.458484
NA DP1456 unknown proteinchromosome CDS1627031 411 + 0.474453
NA DP1533 unknown proteinchromosome CDS1715631 477 - 0.48847
NA DP1521 hypothetical proteinchromosome CDS1702031 972 + 0.441358
NA DP1468 related to fimbrial biogenesis protein FimUchromosome CDS1636464 522 - 0.488506
NA DP0153 hypothetical proteinchromosome CDS170034 1401 + 0.500357
NA DP0110 related to fimbrial assembly protein PilOchromosome CDS119522 633 + 0.410742
NA DP2687 similar to regulator of flagellin synthesis, FlgM (partial length)chromosome CDS3047724 282 + 0.400709
NA DP0512 related to outer membrane (agglutination) proteinchromosome CDS543586 1665 + 0.438438
NA DP2713 conserved hypothetical proteinchromosome CDS3074358 624 - 0.512821
NA DP2936 probable cell division protein FtsYchromosome CDS3322251 1413 + 0.500354
NA DPPB56 hypothetical proteinLSv54, large plasmid CDS57820 14178 - 0.494992
NA DP0107 related to signal peptidase Ichromosome CDS116858 645 - 0.410853
NA DP1452 related to fimbrial protein [Precursor]chromosome CDS1624720 429 - 0.447552
NA DP1638 conserved hypothetical proteinchromosome CDS1827476 3393 - 0.442971
NA DPPB12 probable conjugal transfer protein TrbBLSv54, large plasmid CDS12879 942 + 0.418259
NA DP0909 conserved hypothetical proteinchromosome CDS1022873 333 + 0.423423
NA DP0896 probable twitching mobility proteinchromosome CDS1008642 1170 + 0.480342
NA DP1583 related to capsid protein GPC of phage lambdachromosome CDS1767846 1302 + 0.568356
NA DP0523 probable general secretion pathway protein Echromosome CDS570128 1524 - 0.510499
NA DP1469 related to fimbrial biogenesis protein PilY1chromosome CDS1636970 4923 - 0.484054
NA DP2782 probable type 4 fimbrial assembly protein (PilC)chromosome CDS3146056 1206 + 0.451078
NA DPPB24 probable TraG protein, C-terminal partLSv54, large plasmid CDS26445 417 + 0.455635
NA DPPB18 probable conjugal transfer protein TrbGLSv54, large plasmid CDS19963 987 + 0.389058
NA DP0115 probable protein-export protein SecBchromosome CDS125225 471 - 0.477707
NA DP2671 probable flagellar biosynthetic protein (FliP)chromosome CDS3033515 783 + 0.454662
NA DP2799 probable signal recognition particle protein (SRP54)chromosome CDS3158808 1443 + 0.437976
NA DP0112 related to fimbrial assembly protein PilQ [Precursor]chromosome CDS120693 1827 + 0.448276
NA DP2107 hypothetical outer membrane proteinchromosome CDS2417631 1341 + 0.491424
NA DP1457 related to fimbrial biogenesis proteinchromosome CDS1627445 561 + 0.488414
NA DP2672 probable flagellar biosynthetic protein (FliQ)chromosome CDS3034307 267 + 0.505618
NA DP1522 hypothetical proteinchromosome CDS1703021 738 + 0.410569
NA DPPB16 probable conjugal transfer protein TrbLLSv54, large plasmid CDS17813 1434 + 0.401674
NA DP1530 probable secretory protein kinasechromosome CDS1711729 1386 - 0.465368
NA DP0373 related to outer membrane protein TolC [Precursor]chromosome CDS404239 1431 - 0.487771
NA DP2551 probable lipoprotein signal peptidasechromosome CDS2905904 498 - 0.439759
NA DP2410 related to biopolymer transport protein (TolR)chromosome CDS2752861 315 + 0.473016
NA DPPB20 probable conjugal transfer protein TrbILSv54, large plasmid CDS21388 1248 + 0.465545
NA DP2660 unknown proteinchromosome CDS3024549 450 + 0.415556
NA DP3017 related to type IV prepilin leader peptidasechromosome CDS3415292 792 + 0.515152
NA DP2121 related to outer membrane lipoproteinchromosome CDS2434479 1431 - 0.531097
NA DP1538 related to pilus assembly protein pilin subunitchromosome CDS1719460 180 - 0.466667
NA DP2658 related to flagellar assembly protein (FliH)chromosome CDS3022333 873 + 0.460481
NA DP2674 related to flagellar biosynthetic protein (FlhB)chromosome CDS3035622 1068 + 0.494382
NA DP2673 related to flagellar biosynthetic protein (FliR)chromosome CDS3034739 783 + 0.494253
NA DP2199 related to proteinase IVchromosome CDS2523172 1821 + 0.447007
NA DP1529 related to TadBchromosome CDS1710745 954 - 0.399371
NA DP1696 probable outer membrane efflux pump channel protein [precursor]chromosome CDS1900857 1401 - 0.48394
NA DP2750 probable preprotein translocase SecA subunitchromosome CDS3115407 2553 - 0.452801
NA DP1536 hypothetical proteinchromosome CDS1717903 858 - 0.488345
NA DP2766 hypothetical proteinchromosome CDS3130769 510 + 0.498039
NA DP1464 related to prepilin peptidase dependent protein D [Precursor]chromosome CDS1634065 459 - 0.529412
NA DP0108 related to fimbrial assembly protein PilMchromosome CDS117851 1065 + 0.428169
NA DPPB55 hypothetical proteinLSv54, large plasmid CDS55523 2298 - 0.436466
NA DPPB14 probable conjugal transfer protein TrbELSv54, large plasmid CDS14157 2715 + 0.41768
NA DP2669 probable flagellar motor switch protein (FliN)chromosome CDS3032807 372 + 0.459677
NA DP1528 hypothetical membrane proteinchromosome CDS1709791 852 - 0.467136
NA DPPB13 probable conjugal transfer protein TrbCLSv54, large plasmid CDS13830 327 + 0.382263
NA DP2973 related to biopolymer transport protein (ExbB)chromosome CDS3362412 525 - 0.521905
NA DP1462 related to PilY1 proteinchromosome CDS1631133 2250 + 0.448889
NA DP2226 probable type IV pilus assembly protein (TapB)chromosome CDS2559093 2232 - 0.457885
NA DP0806 related to protein-export membrane protein SecDchromosome CDS907920 2604 - 0.470814
NA DP2972 probable biopolymer transport protein (ExbD2)chromosome CDS3361998 405 - 0.516049
NA DP1145 probable preprotein translocase, SecY subunitchromosome CDS1281868 1305 + 0.412261
NA DP0099 related to secretion protein SecGchromosome CDS109547 336 - 0.449405
NA DPPB17 probable conjugal transfer protein TrbFLSv54, large plasmid CDS19288 666 + 0.394895
NA DP2538 probable ATP-dependent Clp protease, proteolytic subunit (ClpP)chromosome CDS2893478 642 - 0.436137
NA DPPB54 conserved hypothetical proteinLSv54, large plasmid CDS53294 1728 - 0.391782
NA DP2974 related to transport protein TolQchromosome CDS3362945 1392 - 0.549569
NA DPPB25 probable conjugal transfer protein TraF precursorLSv54, large plasmid CDS26858 450 + 0.426667
NA DP2835 related to outer membrane protein (OprM)chromosome CDS3195547 1380 + 0.475362
NA DP1455 related to prepilin peptidase dependent protein D [Precursor]chromosome CDS1625947 456 - 0.45614
NA DP2655 related to flagellar hook-basal body complex protein (FliE)chromosome CDS3019350 297 + 0.481481
NA DP2409 related to biopolymer transport protein (TolQ)chromosome CDS2752069 699 + 0.473534
NA DP0407 conserved hypothetical proteinchromosome CDS437864 1287 + 0.454545
NA DP1111 related to preprotein translocase secE subunit (partial length)chromosome CDS1255809 255 + 0.376471
NA DP1658 related to flagellar protein FliSchromosome CDS1850502 615 - 0.508943
NA DP1520 conserved hypothetical proteinchromosome CDS1690485 10887 + 0.505557
NA DP2659 probable flagellum-specific ATP synthase (FliI)chromosome CDS3023224 1305 + 0.516475
NA DP0794 probable SMF protein (DNA processing chain A)chromosome CDS893681 1074 + 0.501862
NA DP0109 related to fimbrial assembly protein PilNchromosome CDS118943 576 + 0.421875
NA DP1459 unknown proteinchromosome CDS1628707 468 + 0.49359
NA DP2105 conserved hypothetical proteinchromosome CDS2406773 7893 + 0.56189
NA DP2675 probable flagellar biosynthesis protein (FlhA)chromosome CDS3036692 2109 + 0.490754
NA DP2041 related to fimbrial protein [Precursor]chromosome CDS2322958 234 - 0.478632
NA DP2412 related to TolB protein [Precursor]chromosome CDS2754233 1317 + 0.477601
NA DP2074 unknown proteinchromosome CDS2356042 7092 - 0.61379
NA DP1694 probable twitching mobility proteinchromosome CDS1898606 1083 + 0.45337
NA DP1870 hypothetical proteinchromosome CDS2104148 462 - 0.426407
NA DPPB23 probable TraG protein, N-terminal partLSv54, large plasmid CDS24978 1434 + 0.423989
NA DP1237 unknown proteinchromosome CDS1381183 1284 - 0.494548
NA DP1535 conserved hypothetical proteinchromosome CDS1716434 1443 - 0.496881
tatA DP2621 related to Sec-independent protein translocase protein TatAchromosome CDS2979513 255 + 0.443137
tatB DP1479 related to Sec-independent protein translocase protein TatBchromosome CDS1651069 477 - 0.498952
tatC DP2718 related to Sec-independent protein translocase protein TatCchromosome CDS3080830 636 - 0.427673
tatC DP1763 related to Sec-independent protein translocase protein TatCchromosome CDS1986999 696 - 0.45977
tatC DP1478 related to Sec-independent protein translocase protein TatCchromosome CDS1650306 777 - 0.5148
tatE DP2620 related to Sec-independent protein translocase protein TatEchromosome CDS2979221 201 + 0.39801