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2024-05-03 15:04:52

Gene list

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COG category: Intracellular trafficking and secretion
Organism: Candidatus Pelagibacter ubique HTCC1062, HTCC1062

Number of genes found: 35

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Candidatus Pelagibacter ubique HTCC1062, HTCC1062
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SAR11_1219 Fimbrial protein pilinchromosome CDS1165696 759 + 0.346509
NA SAR11_0932 hypothetical proteinchromosome CDS895754 21954 + 0.36162
ccmD SAR11_0286 Heme exporter protein Dchromosome CDS288558 228 - 0.276316
clpP SAR11_0880 ATP-dependent Clp protease proteolytic subunitchromosome CDS844691 612 + 0.318627
ffh SAR11_0256 signal recognition particle proteinchromosome CDS258831 1359 - 0.337748
ftsY SAR11_0258 cell division particlechromosome CDS261173 918 + 0.308279
lspA SAR11_0157 Lipoprotein signal peptidasechromosome CDS159167 501 - 0.243513
marC SAR11_0301 marC family proteinchromosome CDS298160 609 - 0.279146
ostA SAR11_0713 organic solvent tolerance-like proteinchromosome CDS695237 2445 - 0.267076
pilB SAR11_0059 Type II Secretion System PilBchromosome CDS68744 1752 - 0.312785
pilC SAR11_0058 Type II Secretion System PilCchromosome CDS67509 1233 - 0.310624
pilMN SAR11_0063 Type II Secretionchromosome CDS73227 2544 - 0.271619
pilQ SAR11_0060 Type II Secretion PilQchromosome CDS70495 1557 - 0.312139
pilT SAR11_0074 Type II Secretion PilTchromosome CDS88721 1014 - 0.336292
pilY1 SAR11_0068 Type II Secretion PilY1chromosome CDS80345 4572 - 0.372485
pild SAR11_0065 Type II Secretion PilDchromosome CDS78561 765 + 0.262745
pulG SAR11_0053 Putative pseudo-pilin PulGchromosome CDS65399 438 - 0.328767
secA SAR11_0512 preprotein translocase secAchromosome CDS499808 2565 - 0.288109
secB SAR11_0338 Bacterial protein export chaperonechromosome CDS331600 423 + 0.245863
secD SAR11_0980 protein-export membrane protein SECDchromosome CDS959909 1554 + 0.29601
secE SAR11_1129 Protein secE/sec61-gamma proteinchromosome CDS1085222 192 - 0.3125
secF SAR11_0981 preprotein translocase chain secFchromosome CDS961462 888 + 0.268018
secG SAR11_0928 Preprotein translocase SecG subunitchromosome CDS893154 300 + 0.33
secY SAR11_1097 Preprotein translocase SECY subunitchromosome CDS1061229 1281 - 0.316159
sipF SAR11_1054 signal peptidase Ichromosome CDS1023514 735 - 0.259864
sohB SAR11_0615 Peptidase family S49chromosome CDS601340 807 + 0.319703
tatA SAR11_0975 Twin-arginine translocation protein TatA/Echromosome CDS957128 201 + 0.333333
tatB SAR11_0976 Twin-arginine translocation protein TatBchromosome CDS957334 222 + 0.31982
tatC SAR11_0977 sec-independent protein translocase protein tatCchromosome CDS957542 765 + 0.288889
tolB SAR11_0597 tolB proteinchromosome CDS582046 1341 + 0.310962
tolC SAR11_0640 Outer membrane protein TolCchromosome CDS624419 1299 + 0.297921
tolQ SAR11_0594 inner membrane protein TolQchromosome CDS580136 675 + 0.30963
tolR SAR11_0595 tolR proteinchromosome CDS580812 417 + 0.311751
yajC SAR11_0979 YajCchromosome CDS959612 285 + 0.291228
yidC SAR11_0466 60 kDa inner membrane proteinchromosome CDS459104 1677 - 0.307692